Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
BRCA2P51587 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
BRCA2P51587 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
BRCA2P51587 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC15.02□□□□□ -0.01
BRCA2P51587 TRIP12-205ENST00000409677 1507 ntTSL 2 BASIC15.02□□□□□ -0.01
BRCA2P51587 LY6G6F-201ENST00000375832 920 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
BRCA2P51587 B3GALNT1-204ENST00000417187 1107 ntTSL 2 BASIC15.02□□□□□ -0.01
BRCA2P51587 AL109924.1-201ENST00000444586 914 ntTSL 3 BASIC15.02□□□□□ -0.01
BRCA2P51587 OARD1-214ENST00000486443 764 ntTSL 3 BASIC15.02□□□□□ -0.01
BRCA2P51587 AC025178.1-201ENST00000503441 834 ntTSL 2 BASIC15.02□□□□□ -0.01
BRCA2P51587 WISP1-205ENST00000519433 545 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
BRCA2P51587 EIF5A-207ENST00000572815 811 ntTSL 5 BASIC15.02□□□□□ -0.01
BRCA2P51587 BLVRB-202ENST00000595483 649 ntTSL 2 BASIC15.02□□□□□ -0.01
BRCA2P51587 ZNF415-221ENST00000600574 563 ntTSL 3 BASIC15.02□□□□□ -0.01
BRCA2P51587 LINC00959-202ENST00000637128 826 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
BRCA2P51587 USP8-219ENST00000625664 1568 ntTSL 5 BASIC15.02□□□□□ -0.01
BRCA2P51587 RTP2-201ENST00000358241 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
BRCA2P51587 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC15.02□□□□□ -0.01
BRCA2P51587 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC15.02□□□□□ -0.01
BRCA2P51587 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
BRCA2P51587 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
BRCA2P51587 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
BRCA2P51587 ACP1-207ENST00000439645 605 ntTSL 2 BASIC15.01□□□□□ -0.01
BRCA2P51587 SCOC-209ENST00000512749 841 ntAPPRIS ALT1 TSL 3 BASIC15.01□□□□□ -0.01
BRCA2P51587 AC022784.6-203ENST00000520255 863 ntTSL 3 BASIC15.01□□□□□ -0.01
BRCA2P51587 CACNA1C-AS1-203ENST00000544517 742 ntTSL 4 BASIC15.01□□□□□ -0.01
BRCA2P51587 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
BRCA2P51587 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
BRCA2P51587 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
BRCA2P51587 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
BRCA2P51587 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
BRCA2P51587 PEX11B-203ENST00000537888 1632 ntTSL 2 BASIC15.01□□□□□ -0.01
BRCA2P51587 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
BRCA2P51587 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
BRCA2P51587 OR10K2-201ENST00000314902 939 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
BRCA2P51587 UGT1A6-202ENST00000373424 1128 ntTSL 2 BASIC15.01□□□□□ -0.01
BRCA2P51587 TGFA-206ENST00000445399 812 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
BRCA2P51587 SMUG1-213ENST00000506595 712 ntTSL 5 BASIC15.01□□□□□ -0.01
BRCA2P51587 MRPL51-205ENST00000543164 814 ntTSL 2 BASIC15.01□□□□□ -0.01
BRCA2P51587 MRPL51-206ENST00000543703 441 ntTSL 3 BASIC15.01□□□□□ -0.01
BRCA2P51587 AL355075.5-201ENST00000553568 890 ntBASIC15.01□□□□□ -0.01
BRCA2P51587 BMF-209ENST00000561282 747 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
BRCA2P51587 AC108102.1-201ENST00000606528 548 ntTSL 3 BASIC15.01□□□□□ -0.01
BRCA2P51587 AC007274.3-201ENST00000619838 385 ntBASIC15.01□□□□□ -0.01
BRCA2P51587 MECP2-226ENST00000640414 897 ntTSL 5 BASIC15.01□□□□□ -0.01
BRCA2P51587 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
BRCA2P51587 SAP18-201ENST00000382533 2298 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
BRCA2P51587 AC034205.3-201ENST00000603595 1376 ntBASIC15.01□□□□□ -0.01
BRCA2P51587 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC15.01□□□□□ -0.01
BRCA2P51587 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
BRCA2P51587 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
BRCA2P51587 SPACA5-201ENST00000304355 648 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
BRCA2P51587 MARCKSL1P2-201ENST00000401037 976 ntBASIC15.01□□□□□ -0.01
BRCA2P51587 SNORD88B-201ENST00000408454 91 ntBASIC15.01□□□□□ -0.01
BRCA2P51587 AKR1B1P3-201ENST00000525311 588 ntBASIC15.01□□□□□ -0.01
BRCA2P51587 AC100858.2-201ENST00000531948 487 ntTSL 3 BASIC15.01□□□□□ -0.01
BRCA2P51587 AIPL1-210ENST00000576307 1077 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
BRCA2P51587 ZNF551-202ENST00000596085 469 ntTSL 2 BASIC15.01□□□□□ -0.01
BRCA2P51587 MIR6074-201ENST00000612054 107 ntBASIC15.01□□□□□ -0.01
BRCA2P51587 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
BRCA2P51587 CD9-212ENST00000610354 1315 ntTSL 5 BASIC15.01□□□□□ -0.01
BRCA2P51587 NEK11-213ENST00000511262 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
BRCA2P51587 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
BRCA2P51587 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC15□□□□□ -0.01
BRCA2P51587 TTC39B-201ENST00000297615 3053 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
BRCA2P51587 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
BRCA2P51587 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
BRCA2P51587 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
BRCA2P51587 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
BRCA2P51587 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
BRCA2P51587 CPEB1-213ENST00000617462 2068 ntTSL 1 (best) BASIC15□□□□□ -0.01
BRCA2P51587 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
BRCA2P51587 AC005009.2-201ENST00000452471 687 ntTSL 3 BASIC15□□□□□ -0.01
BRCA2P51587 AC096713.1-201ENST00000514650 978 ntBASIC15□□□□□ -0.01
BRCA2P51587 AC068134.4-201ENST00000613365 122 ntBASIC15□□□□□ -0.01
BRCA2P51587 POLR1C-203ENST00000372389 1355 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
BRCA2P51587 PPP4R1L-201ENST00000244070 1474 ntTSL 1 (best) BASIC15□□□□□ -0.01
BRCA2P51587 GABPB1-206ENST00000543881 1450 ntTSL 2 BASIC15□□□□□ -0.01
BRCA2P51587 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
BRCA2P51587 AC090505.1-201ENST00000430515 1834 ntBASIC15□□□□□ -0.01
BRCA2P51587 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC15□□□□□ -0.01
BRCA2P51587 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
BRCA2P51587 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
BRCA2P51587 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC15□□□□□ -0.01
BRCA2P51587 AKNA-203ENST00000312033 3334 ntTSL 1 (best) BASIC15□□□□□ -0.01
BRCA2P51587 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC15□□□□□ -0.01
BRCA2P51587 AC078925.1-201ENST00000535370 568 ntTSL 2 BASIC15□□□□□ -0.01
BRCA2P51587 AC126177.1-201ENST00000547829 2218 ntBASIC15□□□□□ -0.01
BRCA2P51587 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC15□□□□□ -0.01
BRCA2P51587 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
BRCA2P51587 U62317.4-201ENST00000609758 448 ntBASIC15□□□□□ -0.01
BRCA2P51587 PSMG3-AS1-207ENST00000612019 586 ntTSL 4 BASIC15□□□□□ -0.01
BRCA2P51587 MIF4GD-214ENST00000618645 1230 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
BRCA2P51587 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC15□□□□□ -0.01
BRCA2P51587 RPS9-213ENST00000626547 476 ntTSL 2 BASIC15□□□□□ -0.01
BRCA2P51587 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC15□□□□□ -0.01
BRCA2P51587 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
BRCA2P51587 ZDHHC11-201ENST00000283441 2604 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
BRCA2P51587 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC15□□□□□ -0.01
BRCA2P51587 CCDC178-201ENST00000300227 3087 ntAPPRIS P3 TSL 2 BASIC15□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms