Protein–RNA interactions for Protein: P46098

HTR3A, 5-hydroxytryptamine receptor 3A, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR3AP46098 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC13.02□□□□□ -0.33
HTR3AP46098 AC004898.1-201ENST00000451057 766 ntBASIC13.02□□□□□ -0.33
HTR3AP46098 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC13.02□□□□□ -0.33
HTR3AP46098 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
HTR3AP46098 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC13.02□□□□□ -0.33
HTR3AP46098 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC13.02□□□□□ -0.33
HTR3AP46098 SNORD3B-2-202ENST00000571722 791 ntBASIC13.02□□□□□ -0.33
HTR3AP46098 KRT18P8-201ENST00000581937 1246 ntBASIC13.02□□□□□ -0.33
HTR3AP46098 NAT9-222ENST00000583476 583 ntTSL 3 BASIC13.02□□□□□ -0.33
HTR3AP46098 BAP1-211ENST00000615113 489 ntBASIC13.02□□□□□ -0.33
HTR3AP46098 AL008638.5-201ENST00000623814 1298 ntBASIC13.02□□□□□ -0.33
HTR3AP46098 DDX5-235ENST00000630471 473 ntTSL 4 BASIC13.02□□□□□ -0.33
HTR3AP46098 AC092299.1-201ENST00000632679 757 ntBASIC13.02□□□□□ -0.33
HTR3AP46098 CCND3-215ENST00000511642 2394 ntTSL 2 BASIC13.02□□□□□ -0.33
HTR3AP46098 RET-205ENST00000615310 4337 ntTSL 5 BASIC13.02□□□□□ -0.33
HTR3AP46098 FAM187A-201ENST00000331733 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
HTR3AP46098 CCDC103-204ENST00000417826 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
HTR3AP46098 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
HTR3AP46098 FAM118A-201ENST00000216214 3458 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
HTR3AP46098 XRRA1-207ENST00000527087 2505 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
HTR3AP46098 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC13.02□□□□□ -0.33
HTR3AP46098 SPDYE16-203ENST00000633306 2591 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
HTR3AP46098 POM121L14P-201ENST00000406100 1558 ntBASIC13.02□□□□□ -0.33
HTR3AP46098 MAMDC4-202ENST00000445819 3895 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
HTR3AP46098 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
HTR3AP46098 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC13.02□□□□□ -0.33
HTR3AP46098 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC13.02□□□□□ -0.33
HTR3AP46098 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC13.02□□□□□ -0.33
HTR3AP46098 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC13.02□□□□□ -0.33
HTR3AP46098 PGGHG-204ENST00000409655 2963 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
HTR3AP46098 LRRC32-201ENST00000260061 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
HTR3AP46098 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
HTR3AP46098 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC13.02□□□□□ -0.33
HTR3AP46098 PDHA1-212ENST00000540249 3277 ntTSL 2 BASIC13.01□□□□□ -0.33
HTR3AP46098 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
HTR3AP46098 HERC5-201ENST00000264350 3513 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
HTR3AP46098 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
HTR3AP46098 AC072061.1-201ENST00000569710 2234 ntBASIC13.01□□□□□ -0.33
HTR3AP46098 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
HTR3AP46098 RXRG-204ENST00000619224 2252 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
HTR3AP46098 AP1B1-201ENST00000317368 3903 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
HTR3AP46098 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
HTR3AP46098 YWHAEP7-202ENST00000620903 2455 ntTSL 2 BASIC13.01□□□□□ -0.33
HTR3AP46098 BCL2L1-201ENST00000307677 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
HTR3AP46098 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC13.01□□□□□ -0.33
HTR3AP46098 CARHSP1-218ENST00000614449 2931 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
HTR3AP46098 DNM1P41-201ENST00000623634 3350 ntBASIC13.01□□□□□ -0.33
HTR3AP46098 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
HTR3AP46098 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
HTR3AP46098 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
HTR3AP46098 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC13.01□□□□□ -0.33
HTR3AP46098 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC13.01□□□□□ -0.33
HTR3AP46098 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC13.01□□□□□ -0.33
HTR3AP46098 AC104306.2-201ENST00000451877 341 ntBASIC13.01□□□□□ -0.33
HTR3AP46098 AC104073.2-201ENST00000453737 312 ntBASIC13.01□□□□□ -0.33
HTR3AP46098 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC13.01□□□□□ -0.33
HTR3AP46098 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC13.01□□□□□ -0.33
HTR3AP46098 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC13.01□□□□□ -0.33
HTR3AP46098 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC13.01□□□□□ -0.33
HTR3AP46098 MARK2P5-201ENST00000507649 634 ntBASIC13.01□□□□□ -0.33
HTR3AP46098 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC13.01□□□□□ -0.33
HTR3AP46098 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
HTR3AP46098 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC13.01□□□□□ -0.33
HTR3AP46098 AC009779.1-201ENST00000551138 283 ntBASIC13.01□□□□□ -0.33
HTR3AP46098 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC13.01□□□□□ -0.33
HTR3AP46098 SKA2-205ENST00000580541 689 ntTSL 3 BASIC13.01□□□□□ -0.33
HTR3AP46098 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
HTR3AP46098 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
HTR3AP46098 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
HTR3AP46098 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC13.01□□□□□ -0.33
HTR3AP46098 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
HTR3AP46098 GRN-222ENST00000639447 1314 ntTSL 2 BASIC13.01□□□□□ -0.33
HTR3AP46098 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
HTR3AP46098 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
HTR3AP46098 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC13.01□□□□□ -0.33
HTR3AP46098 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
HTR3AP46098 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC13.01□□□□□ -0.33
HTR3AP46098 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
HTR3AP46098 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
HTR3AP46098 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC13.01□□□□□ -0.33
HTR3AP46098 CCT8L2-201ENST00000359963 2060 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
HTR3AP46098 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
HTR3AP46098 COPS7B-223ENST00000611614 2468 ntTSL 3 BASIC13.01□□□□□ -0.33
HTR3AP46098 AL031719.1-201ENST00000623365 2587 ntBASIC13.01□□□□□ -0.33
HTR3AP46098 ALKBH5-201ENST00000399138 2748 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
HTR3AP46098 ZSWIM3-201ENST00000255152 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
HTR3AP46098 ARHGEF2-201ENST00000313667 2958 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
HTR3AP46098 MYRIP-203ENST00000425621 2981 ntTSL 2 BASIC13.01□□□□□ -0.33
HTR3AP46098 NFATC1-204ENST00000397790 3453 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
HTR3AP46098 KCNMA1-285ENST00000640605 3864 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
HTR3AP46098 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
HTR3AP46098 MEG3-213ENST00000455531 4867 ntTSL 2 BASIC13□□□□□ -0.33
HTR3AP46098 TRPV1-206ENST00000571088 4105 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
HTR3AP46098 KCTD9-201ENST00000221200 3401 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
HTR3AP46098 ADAM19-203ENST00000517905 3312 ntTSL 5 BASIC13□□□□□ -0.33
HTR3AP46098 POU2AF1-201ENST00000393067 3295 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
HTR3AP46098 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC13□□□□□ -0.33
HTR3AP46098 SKA3-202ENST00000314759 2919 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
HTR3AP46098 YY1AP1-208ENST00000361831 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
HTR3AP46098 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms