Protein–RNA interactions for Protein: P41229

KDM5C, Lysine-specific demethylase 5C, humanhuman

Predictions only

Length 1,560 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM5CP41229 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
KDM5CP41229 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
KDM5CP41229 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
KDM5CP41229 CHCHD7-218ENST00000523975 1805 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
KDM5CP41229 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
KDM5CP41229 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC20.21■□□□□ 0.83
KDM5CP41229 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
KDM5CP41229 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
KDM5CP41229 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
KDM5CP41229 INO80C-202ENST00000334598 974 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
KDM5CP41229 RN7SKP255-201ENST00000363442 313 ntBASIC20.21■□□□□ 0.83
KDM5CP41229 RN7SKP203-201ENST00000363618 332 ntBASIC20.21■□□□□ 0.83
KDM5CP41229 RN7SKP71-201ENST00000364558 318 ntBASIC20.21■□□□□ 0.83
KDM5CP41229 7SK.1-201ENST00000365328 331 ntBASIC20.21■□□□□ 0.83
KDM5CP41229 CASK-202ENST00000378158 3848 ntTSL 5 BASIC20.21■□□□□ 0.83
KDM5CP41229 APOBEC3B-204ENST00000407298 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
KDM5CP41229 HMGN1P4-201ENST00000419500 290 ntBASIC20.21■□□□□ 0.83
KDM5CP41229 CIDEC-204ENST00000430427 877 ntTSL 3 BASIC20.21■□□□□ 0.83
KDM5CP41229 NR1I3-210ENST00000437437 973 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
KDM5CP41229 LINC01833-204ENST00000444871 581 ntTSL 3 BASIC20.21■□□□□ 0.83
KDM5CP41229 AC048380.1-201ENST00000589818 465 ntTSL 3 BASIC20.21■□□□□ 0.83
KDM5CP41229 AC092634.5-206ENST00000593670 812 ntTSL 5 BASIC20.21■□□□□ 0.83
KDM5CP41229 SKINT1L-204ENST00000604015 540 ntTSL 4 BASIC20.21■□□□□ 0.83
KDM5CP41229 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC20.21■□□□□ 0.83
KDM5CP41229 DRD3-202ENST00000383673 1640 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
KDM5CP41229 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
KDM5CP41229 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
KDM5CP41229 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
KDM5CP41229 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
KDM5CP41229 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
KDM5CP41229 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC20.2■□□□□ 0.82
KDM5CP41229 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC20.2■□□□□ 0.82
KDM5CP41229 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
KDM5CP41229 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC20.2■□□□□ 0.82
KDM5CP41229 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
KDM5CP41229 HR-201ENST00000312841 5351 ntTSL 5 BASIC20.2■□□□□ 0.82
KDM5CP41229 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
KDM5CP41229 MORN4-201ENST00000307450 2315 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
KDM5CP41229 TUBA3GP-201ENST00000410028 1325 ntBASIC20.2■□□□□ 0.82
KDM5CP41229 SLIRP-201ENST00000238688 394 ntAPPRIS P3 TSL 2 BASIC20.2■□□□□ 0.82
KDM5CP41229 AC024475.2-201ENST00000312173 879 ntBASIC20.2■□□□□ 0.82
KDM5CP41229 TRBV20OR9-2-201ENST00000379435 416 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
KDM5CP41229 SERPINB8P1-201ENST00000401898 377 ntBASIC20.2■□□□□ 0.82
KDM5CP41229 AL356653.1-201ENST00000402743 360 ntBASIC20.2■□□□□ 0.82
KDM5CP41229 AL589935.1-203ENST00000412751 465 ntTSL 3 BASIC20.2■□□□□ 0.82
KDM5CP41229 AC079325.1-201ENST00000430386 857 ntBASIC20.2■□□□□ 0.82
KDM5CP41229 AL022725.1-201ENST00000436283 369 ntTSL 2 BASIC20.2■□□□□ 0.82
KDM5CP41229 Z84721.1-201ENST00000438841 372 ntBASIC20.2■□□□□ 0.82
KDM5CP41229 AC116552.1-201ENST00000563243 733 ntTSL 3 BASIC20.2■□□□□ 0.82
KDM5CP41229 AC015818.3-201ENST00000583797 589 ntBASIC20.2■□□□□ 0.82
KDM5CP41229 NSRP1-213ENST00000584423 482 ntTSL 2 BASIC20.2■□□□□ 0.82
KDM5CP41229 PAX8-AS1-219ENST00000623306 840 ntTSL 5 BASIC20.2■□□□□ 0.82
KDM5CP41229 DUX4L33-201ENST00000635217 958 ntBASIC20.2■□□□□ 0.82
KDM5CP41229 AC027601.5-201ENST00000624065 2482 ntBASIC20.2■□□□□ 0.82
KDM5CP41229 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
KDM5CP41229 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC20.2■□□□□ 0.82
KDM5CP41229 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
KDM5CP41229 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
KDM5CP41229 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
KDM5CP41229 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
KDM5CP41229 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
KDM5CP41229 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
KDM5CP41229 ZFYVE19-215ENST00000570108 1669 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
KDM5CP41229 ASMT-203ENST00000381241 1388 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
KDM5CP41229 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
KDM5CP41229 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
KDM5CP41229 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
KDM5CP41229 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
KDM5CP41229 CSNK1E-201ENST00000359867 2642 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
KDM5CP41229 SRL-202ENST00000537996 1814 ntTSL 2 BASIC20.19■□□□□ 0.82
KDM5CP41229 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
KDM5CP41229 HRASLS2-201ENST00000255695 742 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
KDM5CP41229 CTLA4-201ENST00000295854 525 ntTSL 5 BASIC20.19■□□□□ 0.82
KDM5CP41229 HYKK-201ENST00000388988 1235 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
KDM5CP41229 MKL1-204ENST00000402630 747 ntTSL 2 BASIC20.19■□□□□ 0.82
KDM5CP41229 AP000346.2-202ENST00000425948 383 ntBASIC20.19■□□□□ 0.82
KDM5CP41229 AP000343.1-201ENST00000440602 385 ntBASIC20.19■□□□□ 0.82
KDM5CP41229 H1FOO-202ENST00000503977 881 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
KDM5CP41229 STMN4-203ENST00000519614 1273 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
KDM5CP41229 AC100778.4-201ENST00000581232 582 ntTSL 4 BASIC20.19■□□□□ 0.82
KDM5CP41229 AL033381.2-201ENST00000603854 732 ntBASIC20.19■□□□□ 0.82
KDM5CP41229 AC092687.3-201ENST00000606907 393 ntTSL 5 BASIC20.19■□□□□ 0.82
KDM5CP41229 LUC7L3-223ENST00000625349 408 ntTSL 2 BASIC20.19■□□□□ 0.82
KDM5CP41229 AL139220.2-222ENST00000627999 756 ntTSL 5 BASIC20.19■□□□□ 0.82
KDM5CP41229 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
KDM5CP41229 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC20.19■□□□□ 0.82
KDM5CP41229 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
KDM5CP41229 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
KDM5CP41229 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC20.19■□□□□ 0.82
KDM5CP41229 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC20.19■□□□□ 0.82
KDM5CP41229 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC20.19■□□□□ 0.82
KDM5CP41229 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
KDM5CP41229 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
KDM5CP41229 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
KDM5CP41229 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
KDM5CP41229 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
KDM5CP41229 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
KDM5CP41229 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
KDM5CP41229 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
KDM5CP41229 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC20.18■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 63.9 ms