Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 MTUS1-204ENST00000381869 6256 ntTSL 5 BASIC14.18□□□□□ -0.14
VCLP18206 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
VCLP18206 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
VCLP18206 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
VCLP18206 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
VCLP18206 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
VCLP18206 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC14.18□□□□□ -0.14
VCLP18206 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
VCLP18206 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
VCLP18206 SH2D3C-201ENST00000314830 3124 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
VCLP18206 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
VCLP18206 TCF12-201ENST00000267811 6061 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
VCLP18206 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
VCLP18206 MAP7-202ENST00000432797 4375 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
VCLP18206 RSBN1L-201ENST00000334955 6422 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
VCLP18206 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
VCLP18206 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
VCLP18206 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
VCLP18206 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
VCLP18206 USP17L6P-201ENST00000382470 1197 ntBASIC14.18□□□□□ -0.14
VCLP18206 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC14.18□□□□□ -0.14
VCLP18206 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
VCLP18206 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC14.18□□□□□ -0.14
VCLP18206 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC14.18□□□□□ -0.14
VCLP18206 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
VCLP18206 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC14.18□□□□□ -0.14
VCLP18206 AL161670.2-201ENST00000557650 1227 ntBASIC14.18□□□□□ -0.14
VCLP18206 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
VCLP18206 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC14.18□□□□□ -0.14
VCLP18206 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC14.18□□□□□ -0.14
VCLP18206 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
VCLP18206 AP001505.2-201ENST00000616815 443 ntBASIC14.18□□□□□ -0.14
VCLP18206 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC14.18□□□□□ -0.14
VCLP18206 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
VCLP18206 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC14.18□□□□□ -0.14
VCLP18206 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
VCLP18206 STIM1-201ENST00000300737 4038 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
VCLP18206 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
VCLP18206 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC14.18□□□□□ -0.14
VCLP18206 AP002761.4-201ENST00000565433 3361 ntBASIC14.18□□□□□ -0.14
VCLP18206 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
VCLP18206 USP2-201ENST00000260187 3732 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
VCLP18206 GNG12-AS1-201ENST00000413628 2058 ntTSL 2 BASIC14.18□□□□□ -0.14
VCLP18206 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
VCLP18206 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
VCLP18206 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
VCLP18206 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
VCLP18206 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
VCLP18206 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC14.17□□□□□ -0.14
VCLP18206 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC14.17□□□□□ -0.14
VCLP18206 MYO16-203ENST00000357550 6779 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
VCLP18206 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC14.17□□□□□ -0.14
VCLP18206 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC14.17□□□□□ -0.14
VCLP18206 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
VCLP18206 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
VCLP18206 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
VCLP18206 TOE1-201ENST00000372090 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
VCLP18206 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC14.17□□□□□ -0.14
VCLP18206 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC14.17□□□□□ -0.14
VCLP18206 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC14.17□□□□□ -0.14
VCLP18206 TAB2-208ENST00000636456 3092 ntTSL 5 BASIC14.17□□□□□ -0.14
VCLP18206 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
VCLP18206 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC14.17□□□□□ -0.14
VCLP18206 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC14.17□□□□□ -0.14
VCLP18206 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
VCLP18206 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
VCLP18206 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
VCLP18206 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
VCLP18206 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC14.17□□□□□ -0.14
VCLP18206 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
VCLP18206 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
VCLP18206 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
VCLP18206 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC14.17□□□□□ -0.14
VCLP18206 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC14.17□□□□□ -0.14
VCLP18206 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC14.17□□□□□ -0.14
VCLP18206 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC14.17□□□□□ -0.14
VCLP18206 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC14.17□□□□□ -0.14
VCLP18206 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
VCLP18206 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC14.17□□□□□ -0.14
VCLP18206 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC14.17□□□□□ -0.14
VCLP18206 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
VCLP18206 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC14.17□□□□□ -0.14
VCLP18206 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC14.17□□□□□ -0.14
VCLP18206 ZNF23-203ENST00000393539 3242 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
VCLP18206 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
VCLP18206 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC14.17□□□□□ -0.14
VCLP18206 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
VCLP18206 ZNF721-205ENST00000511833 2966 ntAPPRIS P1 TSL 4 BASIC14.17□□□□□ -0.14
VCLP18206 CTR9-201ENST00000361367 4586 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
VCLP18206 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
VCLP18206 CTBP1-AS-201ENST00000625256 3886 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
VCLP18206 AC004846.1-201ENST00000554614 3050 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
VCLP18206 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
VCLP18206 SEZ6L-203ENST00000360929 6307 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
VCLP18206 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
VCLP18206 LINC01257-201ENST00000376678 2473 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
VCLP18206 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
VCLP18206 CYB561-202ENST00000392975 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
VCLP18206 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
VCLP18206 UNC5CL-201ENST00000244565 3136 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 71.2 ms