Protein–RNA interactions for Protein: P03979

TRGV3, T cell receptor gamma variable 3 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV3P03979 NAT9-211ENST00000580632 799 ntTSL 3 BASIC11.09□□□□□ -0.63
TRGV3P03979 CU633904.3-201ENST00000624042 1029 ntBASIC11.09□□□□□ -0.63
TRGV3P03979 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
TRGV3P03979 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
TRGV3P03979 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC11.09□□□□□ -0.63
TRGV3P03979 SLC4A5-205ENST00000394019 6348 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
TRGV3P03979 AC125611.4-201ENST00000553259 4166 ntTSL 2 BASIC11.09□□□□□ -0.63
TRGV3P03979 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
TRGV3P03979 BRPF1-205ENST00000433861 4304 ntTSL 2 BASIC11.09□□□□□ -0.63
TRGV3P03979 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
TRGV3P03979 GRK3-201ENST00000324198 9103 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
TRGV3P03979 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
TRGV3P03979 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC11.09□□□□□ -0.63
TRGV3P03979 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC11.09□□□□□ -0.63
TRGV3P03979 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
TRGV3P03979 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC11.09□□□□□ -0.63
TRGV3P03979 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC11.09□□□□□ -0.63
TRGV3P03979 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
TRGV3P03979 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC11.09□□□□□ -0.63
TRGV3P03979 CYB5RL-201ENST00000287899 5777 ntTSL 3 BASIC11.09□□□□□ -0.63
TRGV3P03979 KRT18P9-201ENST00000604826 1300 ntBASIC11.09□□□□□ -0.63
TRGV3P03979 MYO7A-202ENST00000409709 7462 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
TRGV3P03979 HLCS-201ENST00000336648 6010 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.63
TRGV3P03979 GOLGA8EP-201ENST00000530246 1959 ntBASIC11.08□□□□□ -0.64
TRGV3P03979 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
TRGV3P03979 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
TRGV3P03979 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC11.08□□□□□ -0.64
TRGV3P03979 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
TRGV3P03979 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
TRGV3P03979 GSE1-203ENST00000405402 4366 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
TRGV3P03979 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
TRGV3P03979 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC11.08□□□□□ -0.64
TRGV3P03979 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
TRGV3P03979 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
TRGV3P03979 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
TRGV3P03979 TMC8-201ENST00000318430 4411 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
TRGV3P03979 RPL13AP3-202ENST00000494676 1473 ntBASIC11.08□□□□□ -0.64
TRGV3P03979 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
TRGV3P03979 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC11.08□□□□□ -0.64
TRGV3P03979 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC11.08□□□□□ -0.64
TRGV3P03979 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
TRGV3P03979 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC11.08□□□□□ -0.64
TRGV3P03979 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
TRGV3P03979 CICP20-201ENST00000443330 2801 ntBASIC11.08□□□□□ -0.64
TRGV3P03979 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
TRGV3P03979 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
TRGV3P03979 KRT17P5-201ENST00000332088 839 ntBASIC11.08□□□□□ -0.64
TRGV3P03979 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC11.08□□□□□ -0.64
TRGV3P03979 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC11.08□□□□□ -0.64
TRGV3P03979 PTPA-217ENST00000434095 870 ntTSL 2 BASIC11.08□□□□□ -0.64
TRGV3P03979 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
TRGV3P03979 AC073150.1-201ENST00000450406 1084 ntBASIC11.08□□□□□ -0.64
TRGV3P03979 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC11.08□□□□□ -0.64
TRGV3P03979 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC11.08□□□□□ -0.64
TRGV3P03979 AC024681.1-201ENST00000521917 487 ntBASIC11.08□□□□□ -0.64
TRGV3P03979 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC11.08□□□□□ -0.64
TRGV3P03979 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC11.08□□□□□ -0.64
TRGV3P03979 CMC2-204ENST00000562713 573 ntTSL 3 BASIC11.08□□□□□ -0.64
TRGV3P03979 CMC2-209ENST00000565108 399 ntTSL 2 BASIC11.08□□□□□ -0.64
TRGV3P03979 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC11.08□□□□□ -0.64
TRGV3P03979 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC11.08□□□□□ -0.64
TRGV3P03979 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC11.08□□□□□ -0.64
TRGV3P03979 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC11.08□□□□□ -0.64
TRGV3P03979 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
TRGV3P03979 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC11.08□□□□□ -0.64
TRGV3P03979 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC11.08□□□□□ -0.64
TRGV3P03979 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
TRGV3P03979 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC11.08□□□□□ -0.64
TRGV3P03979 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
TRGV3P03979 ADGRD1-201ENST00000261654 5168 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
TRGV3P03979 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
TRGV3P03979 USP39-220ENST00000613444 2161 ntTSL 2 BASIC11.08□□□□□ -0.64
TRGV3P03979 NFKB1-201ENST00000226574 4085 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
TRGV3P03979 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
TRGV3P03979 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC11.08□□□□□ -0.64
TRGV3P03979 CPLX2-201ENST00000359546 5023 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
TRGV3P03979 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
TRGV3P03979 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
TRGV3P03979 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
TRGV3P03979 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
TRGV3P03979 SLFNL1-AS1-201ENST00000626479 4800 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
TRGV3P03979 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
TRGV3P03979 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC11.08□□□□□ -0.64
TRGV3P03979 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC11.08□□□□□ -0.64
TRGV3P03979 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
TRGV3P03979 AMT-256ENST00000638063 1783 ntTSL 5 BASIC11.08□□□□□ -0.64
TRGV3P03979 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC11.08□□□□□ -0.64
TRGV3P03979 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
TRGV3P03979 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC11.08□□□□□ -0.64
TRGV3P03979 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
TRGV3P03979 CICP8-201ENST00000455800 2813 ntBASIC11.08□□□□□ -0.64
TRGV3P03979 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
TRGV3P03979 SMAD2-203ENST00000402690 12075 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
TRGV3P03979 PTPRH-202ENST00000376350 3877 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
TRGV3P03979 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
TRGV3P03979 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
TRGV3P03979 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
TRGV3P03979 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
TRGV3P03979 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC11.07□□□□□ -0.64
TRGV3P03979 TROVE2-208ENST00000432079 7848 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 95.4 ms