Protein–RNA interactions for Protein: P01911

HLA-DRB1, HLA class II histocompatibility antigen, DRB1-15 beta chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB1P01911 ASXL1-201ENST00000306058 6591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
HLA-DRB1P01911 DLGAP1-205ENST00000400150 5332 ntTSL 5 BASIC11.33□□□□□ -0.6
HLA-DRB1P01911 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
HLA-DRB1P01911 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
HLA-DRB1P01911 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
HLA-DRB1P01911 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
HLA-DRB1P01911 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
HLA-DRB1P01911 RNA5SP359-201ENST00000364838 113 ntBASIC11.33□□□□□ -0.6
HLA-DRB1P01911 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC11.33□□□□□ -0.6
HLA-DRB1P01911 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
HLA-DRB1P01911 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC11.33□□□□□ -0.6
HLA-DRB1P01911 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
HLA-DRB1P01911 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
HLA-DRB1P01911 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC11.33□□□□□ -0.6
HLA-DRB1P01911 RN7SL277P-201ENST00000481521 288 ntBASIC11.33□□□□□ -0.6
HLA-DRB1P01911 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
HLA-DRB1P01911 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC11.33□□□□□ -0.6
HLA-DRB1P01911 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC11.33□□□□□ -0.6
HLA-DRB1P01911 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC11.33□□□□□ -0.6
HLA-DRB1P01911 MAX-218ENST00000557746 571 ntTSL 4 BASIC11.33□□□□□ -0.6
HLA-DRB1P01911 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC11.33□□□□□ -0.6
HLA-DRB1P01911 ZNF843-202ENST00000564218 3816 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
HLA-DRB1P01911 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC11.33□□□□□ -0.6
HLA-DRB1P01911 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
HLA-DRB1P01911 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC11.33□□□□□ -0.6
HLA-DRB1P01911 PSME4-202ENST00000404125 7099 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
HLA-DRB1P01911 LINC01165-201ENST00000445190 1623 ntBASIC11.33□□□□□ -0.6
HLA-DRB1P01911 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC11.33□□□□□ -0.6
HLA-DRB1P01911 MAPT-IT1-201ENST00000624111 3016 ntBASIC11.33□□□□□ -0.6
HLA-DRB1P01911 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC11.33□□□□□ -0.6
HLA-DRB1P01911 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
HLA-DRB1P01911 CACNA1G-208ENST00000442258 7226 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
HLA-DRB1P01911 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
HLA-DRB1P01911 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
HLA-DRB1P01911 DLX3-201ENST00000434704 2602 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
HLA-DRB1P01911 KLHL8-201ENST00000273963 5621 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
HLA-DRB1P01911 NFATC2-202ENST00000396009 7437 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
HLA-DRB1P01911 FRMPD2B-201ENST00000431305 1347 ntBASIC11.33□□□□□ -0.6
HLA-DRB1P01911 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
HLA-DRB1P01911 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC11.33□□□□□ -0.6
HLA-DRB1P01911 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
HLA-DRB1P01911 TRIB2-202ENST00000381465 2778 ntTSL 2 BASIC11.33□□□□□ -0.6
HLA-DRB1P01911 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
HLA-DRB1P01911 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC11.32□□□□□ -0.6
HLA-DRB1P01911 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
HLA-DRB1P01911 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
HLA-DRB1P01911 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
HLA-DRB1P01911 FUT3-201ENST00000303225 2584 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
HLA-DRB1P01911 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC11.32□□□□□ -0.6
HLA-DRB1P01911 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
HLA-DRB1P01911 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
HLA-DRB1P01911 RPL13AP3-202ENST00000494676 1473 ntBASIC11.32□□□□□ -0.6
HLA-DRB1P01911 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
HLA-DRB1P01911 GLB1L3-201ENST00000389887 3566 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
HLA-DRB1P01911 C7orf57-202ENST00000420324 1957 ntTSL 5 BASIC11.32□□□□□ -0.6
HLA-DRB1P01911 DGKE-201ENST00000284061 8660 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
HLA-DRB1P01911 INVS-201ENST00000262456 2968 ntTSL 5 BASIC11.32□□□□□ -0.6
HLA-DRB1P01911 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
HLA-DRB1P01911 TRPM4-201ENST00000252826 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
HLA-DRB1P01911 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
HLA-DRB1P01911 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
HLA-DRB1P01911 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC11.32□□□□□ -0.6
HLA-DRB1P01911 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
HLA-DRB1P01911 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC11.32□□□□□ -0.6
HLA-DRB1P01911 CD300LB-202ENST00000392621 2286 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
HLA-DRB1P01911 AC025594.2-201ENST00000609480 3902 ntAPPRIS P1 TSL 3 BASIC11.32□□□□□ -0.6
HLA-DRB1P01911 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
HLA-DRB1P01911 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC11.32□□□□□ -0.6
HLA-DRB1P01911 MEX3B-202ENST00000558133 4333 ntBASIC11.32□□□□□ -0.6
HLA-DRB1P01911 ELK1-201ENST00000247161 2695 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
HLA-DRB1P01911 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
HLA-DRB1P01911 SDCCAG3P2-201ENST00000326105 1023 ntBASIC11.32□□□□□ -0.6
HLA-DRB1P01911 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
HLA-DRB1P01911 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
HLA-DRB1P01911 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
HLA-DRB1P01911 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
HLA-DRB1P01911 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
HLA-DRB1P01911 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC11.32□□□□□ -0.6
HLA-DRB1P01911 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
HLA-DRB1P01911 AL596276.2-201ENST00000447525 331 ntBASIC11.32□□□□□ -0.6
HLA-DRB1P01911 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC11.32□□□□□ -0.6
HLA-DRB1P01911 SDHD-202ENST00000525291 790 ntTSL 3 BASIC11.32□□□□□ -0.6
HLA-DRB1P01911 RERG-205ENST00000537647 935 ntTSL 2 BASIC11.32□□□□□ -0.6
HLA-DRB1P01911 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
HLA-DRB1P01911 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
HLA-DRB1P01911 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC11.32□□□□□ -0.6
HLA-DRB1P01911 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC11.32□□□□□ -0.6
HLA-DRB1P01911 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC11.32□□□□□ -0.6
HLA-DRB1P01911 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC11.32□□□□□ -0.6
HLA-DRB1P01911 AC244093.1-201ENST00000610837 814 ntBASIC11.32□□□□□ -0.6
HLA-DRB1P01911 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC11.32□□□□□ -0.6
HLA-DRB1P01911 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
HLA-DRB1P01911 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
HLA-DRB1P01911 LINC01815-202ENST00000641468 1409 ntBASIC11.32□□□□□ -0.6
HLA-DRB1P01911 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
HLA-DRB1P01911 NEK9-201ENST00000238616 8310 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
HLA-DRB1P01911 BRSK2-207ENST00000528710 3528 ntTSL 2 BASIC11.32□□□□□ -0.6
HLA-DRB1P01911 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
HLA-DRB1P01911 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
HLA-DRB1P01911 ZYG11A-201ENST00000371528 4469 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 85.7 ms