Protein–RNA interactions for Protein: P01733

TRBV12-3, T-cell receptor beta chain V region YT35, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV12-3P01733 AC015967.2-201ENST00000624092 234 ntBASIC10.84□□□□□ -0.67
TRBV12-3P01733 AC006435.4-201ENST00000625037 234 ntBASIC10.84□□□□□ -0.67
TRBV12-3P01733 AC009145.4-201ENST00000625119 1294 ntBASIC10.84□□□□□ -0.67
TRBV12-3P01733 AL356737.1-201ENST00000634391 234 ntBASIC10.84□□□□□ -0.67
TRBV12-3P01733 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
TRBV12-3P01733 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
TRBV12-3P01733 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
TRBV12-3P01733 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
TRBV12-3P01733 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC10.84□□□□□ -0.67
TRBV12-3P01733 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
TRBV12-3P01733 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
TRBV12-3P01733 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
TRBV12-3P01733 STK25-235ENST00000543554 2556 ntTSL 2 BASIC10.84□□□□□ -0.67
TRBV12-3P01733 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
TRBV12-3P01733 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
TRBV12-3P01733 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC10.84□□□□□ -0.67
TRBV12-3P01733 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
TRBV12-3P01733 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
TRBV12-3P01733 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
TRBV12-3P01733 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC10.84□□□□□ -0.67
TRBV12-3P01733 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC10.84□□□□□ -0.67
TRBV12-3P01733 YPEL4-201ENST00000300022 1721 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
TRBV12-3P01733 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
TRBV12-3P01733 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
TRBV12-3P01733 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.67
TRBV12-3P01733 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC10.83□□□□□ -0.67
TRBV12-3P01733 WDR81-205ENST00000437219 3184 ntTSL 2 BASIC10.83□□□□□ -0.68
TRBV12-3P01733 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
TRBV12-3P01733 WASF3-202ENST00000361042 4823 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
TRBV12-3P01733 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
TRBV12-3P01733 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
TRBV12-3P01733 AC092053.3-201ENST00000641308 4975 ntBASIC10.83□□□□□ -0.68
TRBV12-3P01733 PRUNE1-205ENST00000368937 1850 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
TRBV12-3P01733 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC10.83□□□□□ -0.68
TRBV12-3P01733 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
TRBV12-3P01733 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
TRBV12-3P01733 TMEM40-205ENST00000435575 1785 ntAPPRIS ALT2 TSL 2 BASIC10.83□□□□□ -0.68
TRBV12-3P01733 SYT4-205ENST00000590752 1765 ntTSL 2 BASIC10.83□□□□□ -0.68
TRBV12-3P01733 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
TRBV12-3P01733 AC093462.1-201ENST00000621167 1683 ntBASIC10.83□□□□□ -0.68
TRBV12-3P01733 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
TRBV12-3P01733 TAPBP-234ENST00000434618 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
TRBV12-3P01733 BIRC2-208ENST00000532672 2617 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
TRBV12-3P01733 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC10.83□□□□□ -0.68
TRBV12-3P01733 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC10.83□□□□□ -0.68
TRBV12-3P01733 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
TRBV12-3P01733 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
TRBV12-3P01733 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
TRBV12-3P01733 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC10.83□□□□□ -0.68
TRBV12-3P01733 PTTG1IP-202ENST00000397886 755 ntTSL 4 BASIC10.83□□□□□ -0.68
TRBV12-3P01733 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
TRBV12-3P01733 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
TRBV12-3P01733 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC10.83□□□□□ -0.68
TRBV12-3P01733 AL513211.1-201ENST00000429053 483 ntTSL 3 BASIC10.83□□□□□ -0.68
TRBV12-3P01733 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC10.83□□□□□ -0.68
TRBV12-3P01733 FTH1P22-201ENST00000456305 520 ntBASIC10.83□□□□□ -0.68
TRBV12-3P01733 RPL18AP8-201ENST00000486071 528 ntBASIC10.83□□□□□ -0.68
TRBV12-3P01733 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC10.83□□□□□ -0.68
TRBV12-3P01733 AC022182.2-201ENST00000525556 859 ntTSL 2 BASIC10.83□□□□□ -0.68
TRBV12-3P01733 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC10.83□□□□□ -0.68
TRBV12-3P01733 OS9-220ENST00000552285 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
TRBV12-3P01733 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC10.83□□□□□ -0.68
TRBV12-3P01733 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC10.83□□□□□ -0.68
TRBV12-3P01733 MIR3907-201ENST00000579424 151 ntBASIC10.83□□□□□ -0.68
TRBV12-3P01733 MIR4522-201ENST00000584932 87 ntBASIC10.83□□□□□ -0.68
TRBV12-3P01733 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
TRBV12-3P01733 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
TRBV12-3P01733 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC10.83□□□□□ -0.68
TRBV12-3P01733 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC10.83□□□□□ -0.68
TRBV12-3P01733 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC10.83□□□□□ -0.68
TRBV12-3P01733 AL121956.4-201ENST00000629925 581 ntTSL 5 BASIC10.83□□□□□ -0.68
TRBV12-3P01733 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
TRBV12-3P01733 ANKRD30B-202ENST00000358984 4359 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
TRBV12-3P01733 AC239798.2-201ENST00000415338 3540 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
TRBV12-3P01733 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
TRBV12-3P01733 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
TRBV12-3P01733 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC10.83□□□□□ -0.68
TRBV12-3P01733 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
TRBV12-3P01733 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
TRBV12-3P01733 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC10.83□□□□□ -0.68
TRBV12-3P01733 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
TRBV12-3P01733 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
TRBV12-3P01733 GOT2-202ENST00000434819 1615 ntTSL 2 BASIC10.83□□□□□ -0.68
TRBV12-3P01733 CNBP-203ENST00000446936 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC10.83□□□□□ -0.68
TRBV12-3P01733 CNBP-204ENST00000451728 1641 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
TRBV12-3P01733 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC10.83□□□□□ -0.68
TRBV12-3P01733 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
TRBV12-3P01733 MSRA-201ENST00000317173 1536 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
TRBV12-3P01733 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
TRBV12-3P01733 SNCAIP-222ENST00000542191 2729 ntTSL 5 BASIC10.83□□□□□ -0.68
TRBV12-3P01733 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
TRBV12-3P01733 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC10.83□□□□□ -0.68
TRBV12-3P01733 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
TRBV12-3P01733 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
TRBV12-3P01733 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
TRBV12-3P01733 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
TRBV12-3P01733 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC10.83□□□□□ -0.68
TRBV12-3P01733 ABCA17P-202ENST00000469908 4188 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
TRBV12-3P01733 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
TRBV12-3P01733 ENO2-201ENST00000229277 2423 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 76.7 ms