Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 CHTF8-202ENST00000398235 1073 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
ZIC3O60481 FXNP2-201ENST00000411625 547 ntBASIC12.55□□□□□ -0.4
ZIC3O60481 LINC01237-201ENST00000415434 573 ntTSL 4 BASIC12.55□□□□□ -0.4
ZIC3O60481 PPA2-205ENST00000432483 859 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
ZIC3O60481 HLA-DPB2-205ENST00000435074 1188 ntBASIC12.55□□□□□ -0.4
ZIC3O60481 AC092638.2-201ENST00000441105 947 ntBASIC12.55□□□□□ -0.4
ZIC3O60481 AC079112.1-201ENST00000454972 939 ntBASIC12.55□□□□□ -0.4
ZIC3O60481 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC12.55□□□□□ -0.4
ZIC3O60481 RNA5SP406-201ENST00000516106 112 ntBASIC12.55□□□□□ -0.4
ZIC3O60481 AC092139.2-201ENST00000563750 754 ntTSL 3 BASIC12.55□□□□□ -0.4
ZIC3O60481 SPINT2-204ENST00000587090 1246 ntAPPRIS ALT2 TSL 3 BASIC12.55□□□□□ -0.4
ZIC3O60481 OCEL1-206ENST00000597836 1044 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
ZIC3O60481 HELLS-212ENST00000630929 400 ntTSL 5 BASIC12.55□□□□□ -0.4
ZIC3O60481 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC12.55□□□□□ -0.4
ZIC3O60481 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
ZIC3O60481 CROT-203ENST00000419147 2959 ntTSL 2 BASIC12.55□□□□□ -0.4
ZIC3O60481 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
ZIC3O60481 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
ZIC3O60481 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC12.55□□□□□ -0.4
ZIC3O60481 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC12.55□□□□□ -0.4
ZIC3O60481 LINC00511-213ENST00000581549 2265 ntTSL 2 BASIC12.55□□□□□ -0.4
ZIC3O60481 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
ZIC3O60481 ZIK1-201ENST00000307468 2510 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
ZIC3O60481 CATSPERD-202ENST00000381624 2516 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
ZIC3O60481 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC12.55□□□□□ -0.4
ZIC3O60481 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
ZIC3O60481 RRAGA-201ENST00000380527 1589 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
ZIC3O60481 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
ZIC3O60481 CXorf40A-212ENST00000514208 1840 ntAPPRIS ALT1 TSL 5 BASIC12.55□□□□□ -0.4
ZIC3O60481 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC12.55□□□□□ -0.4
ZIC3O60481 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC12.55□□□□□ -0.4
ZIC3O60481 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
ZIC3O60481 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
ZIC3O60481 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
ZIC3O60481 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
ZIC3O60481 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
ZIC3O60481 FGD4-203ENST00000472289 1629 ntTSL 2 BASIC12.55□□□□□ -0.4
ZIC3O60481 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
ZIC3O60481 FSTL4-207ENST00000621681 2660 ntTSL 5 BASIC12.55□□□□□ -0.4
ZIC3O60481 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ZIC3O60481 BEND3P1-201ENST00000421591 1944 ntBASIC12.54□□□□□ -0.4
ZIC3O60481 ALDOA-202ENST00000395240 1447 ntAPPRIS ALT1 TSL 5 BASIC12.54□□□□□ -0.4
ZIC3O60481 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
ZIC3O60481 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ZIC3O60481 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
ZIC3O60481 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
ZIC3O60481 MAGEH1-201ENST00000342972 1462 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
ZIC3O60481 GMPR2-206ENST00000557854 2025 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
ZIC3O60481 CWC27-201ENST00000381070 2078 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ZIC3O60481 LINC00637-201ENST00000556586 2056 ntTSL 2 BASIC12.54□□□□□ -0.4
ZIC3O60481 MINDY1-205ENST00000493834 1546 ntTSL 2 BASIC12.54□□□□□ -0.4
ZIC3O60481 AC020763.3-201ENST00000625095 2904 ntBASIC12.54□□□□□ -0.4
ZIC3O60481 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
ZIC3O60481 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ZIC3O60481 TRBV7-3-201ENST00000390361 397 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
ZIC3O60481 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
ZIC3O60481 AC145207.1-201ENST00000415556 691 ntTSL 4 BASIC12.54□□□□□ -0.4
ZIC3O60481 AC005392.1-201ENST00000419624 500 ntTSL 5 BASIC12.54□□□□□ -0.4
ZIC3O60481 AC004869.1-201ENST00000440935 540 ntTSL 4 BASIC12.54□□□□□ -0.4
ZIC3O60481 FAM3D-AS1-201ENST00000464125 821 ntTSL 3 BASIC12.54□□□□□ -0.4
ZIC3O60481 RN7SKP155-201ENST00000516031 288 ntBASIC12.54□□□□□ -0.4
ZIC3O60481 AC003043.1-201ENST00000588260 337 ntTSL 3 BASIC12.54□□□□□ -0.4
ZIC3O60481 AP001269.2-201ENST00000590055 379 ntTSL 3 BASIC12.54□□□□□ -0.4
ZIC3O60481 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC12.54□□□□□ -0.4
ZIC3O60481 RPL13A-213ENST00000621674 1098 ntTSL 5 BASIC12.54□□□□□ -0.4
ZIC3O60481 AC073911.3-201ENST00000624401 631 ntBASIC12.54□□□□□ -0.4
ZIC3O60481 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ZIC3O60481 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
ZIC3O60481 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ZIC3O60481 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ZIC3O60481 ABCF3-201ENST00000292808 2453 ntAPPRIS ALT1 TSL 2 BASIC12.54□□□□□ -0.4
ZIC3O60481 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
ZIC3O60481 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ZIC3O60481 AC089987.1-201ENST00000551654 2209 ntBASIC12.54□□□□□ -0.4
ZIC3O60481 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ZIC3O60481 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ZIC3O60481 FTSJ1-203ENST00000396894 1669 ntTSL 2 BASIC12.54□□□□□ -0.4
ZIC3O60481 IL9RP3-201ENST00000442856 1674 ntBASIC12.54□□□□□ -0.4
ZIC3O60481 AC040160.2-201ENST00000623816 1675 ntBASIC12.54□□□□□ -0.4
ZIC3O60481 RHD-203ENST00000357542 1387 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
ZIC3O60481 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
ZIC3O60481 EDN1-201ENST00000379375 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ZIC3O60481 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
ZIC3O60481 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
ZIC3O60481 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
ZIC3O60481 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC12.53□□□□□ -0.4
ZIC3O60481 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
ZIC3O60481 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
ZIC3O60481 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC12.53□□□□□ -0.4
ZIC3O60481 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
ZIC3O60481 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
ZIC3O60481 ZMIZ1-AS1-203ENST00000456353 2878 ntTSL 2 BASIC12.53□□□□□ -0.4
ZIC3O60481 PPP1R32-201ENST00000338608 1535 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
ZIC3O60481 PGD-201ENST00000270776 1885 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
ZIC3O60481 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
ZIC3O60481 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
ZIC3O60481 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC12.53□□□□□ -0.4
ZIC3O60481 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
ZIC3O60481 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC12.53□□□□□ -0.4
ZIC3O60481 RNF123-203ENST00000433785 1555 ntTSL 5 BASIC12.53□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms