Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 SPDYA-202ENST00000379579 1759 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
TMEM235A6NFC5 RRBP1-206ENST00000455029 2485 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
TMEM235A6NFC5 KCNJ11-201ENST00000339994 2801 ntAPPRIS P1 BASIC12.02□□□□□ -0.48
TMEM235A6NFC5 DPP8-204ENST00000358939 2822 ntTSL 2 BASIC12.02□□□□□ -0.48
TMEM235A6NFC5 GRAMD1B-216ENST00000638157 3849 ntTSL 5 BASIC12.02□□□□□ -0.48
TMEM235A6NFC5 PDE7B-203ENST00000615259 5234 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
TMEM235A6NFC5 IFT88-202ENST00000351808 2856 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
TMEM235A6NFC5 AOC1-204ENST00000467291 2857 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
TMEM235A6NFC5 AL354989.2-201ENST00000435838 1540 ntBASIC12.02□□□□□ -0.48
TMEM235A6NFC5 AC106818.1-201ENST00000623223 3242 ntBASIC12.02□□□□□ -0.48
TMEM235A6NFC5 CNOT7-211ENST00000523917 1885 ntTSL 2 BASIC12.02□□□□□ -0.48
TMEM235A6NFC5 SNED1-201ENST00000310397 8174 ntAPPRIS P2 TSL 5 BASIC12.02□□□□□ -0.48
TMEM235A6NFC5 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
TMEM235A6NFC5 AC022497.1-201ENST00000624916 3691 ntBASIC12.02□□□□□ -0.49
TMEM235A6NFC5 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC12.02□□□□□ -0.49
TMEM235A6NFC5 C5AR1-201ENST00000355085 2311 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
TMEM235A6NFC5 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
TMEM235A6NFC5 GJB1-201ENST00000361726 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
TMEM235A6NFC5 SMPDL3B-206ENST00000549094 1611 ntTSL 5 BASIC12.02□□□□□ -0.49
TMEM235A6NFC5 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
TMEM235A6NFC5 APOD-201ENST00000343267 1130 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
TMEM235A6NFC5 SNX21-203ENST00000372541 771 ntTSL 2 BASIC12.02□□□□□ -0.49
TMEM235A6NFC5 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
TMEM235A6NFC5 AC103592.1-201ENST00000394513 664 ntBASIC12.02□□□□□ -0.49
TMEM235A6NFC5 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
TMEM235A6NFC5 AL645933.1-201ENST00000440087 609 ntBASIC12.02□□□□□ -0.49
TMEM235A6NFC5 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC12.02□□□□□ -0.49
TMEM235A6NFC5 COX5BP1-201ENST00000507622 393 ntBASIC12.02□□□□□ -0.49
TMEM235A6NFC5 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
TMEM235A6NFC5 RNA5SP421-201ENST00000516864 134 ntBASIC12.02□□□□□ -0.49
TMEM235A6NFC5 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.49
TMEM235A6NFC5 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.49
TMEM235A6NFC5 CDK4-206ENST00000549606 558 ntTSL 2 BASIC12.02□□□□□ -0.49
TMEM235A6NFC5 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC12.02□□□□□ -0.49
TMEM235A6NFC5 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC12.02□□□□□ -0.49
TMEM235A6NFC5 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
TMEM235A6NFC5 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
TMEM235A6NFC5 SLC37A4-202ENST00000357590 2356 ntTSL 5 BASIC12.02□□□□□ -0.49
TMEM235A6NFC5 ELN-234ENST00000621115 3452 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.49
TMEM235A6NFC5 IKZF1-203ENST00000346667 5376 ntTSL 5 BASIC12.02□□□□□ -0.49
TMEM235A6NFC5 TMC5-204ENST00000541464 3581 ntTSL 2 BASIC12.02□□□□□ -0.49
TMEM235A6NFC5 GNG12-AS1-201ENST00000413628 2058 ntTSL 2 BASIC12.02□□□□□ -0.49
TMEM235A6NFC5 MAGED4-201ENST00000375626 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
TMEM235A6NFC5 MKLN1-203ENST00000421797 2460 ntTSL 2 BASIC12.02□□□□□ -0.49
TMEM235A6NFC5 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
TMEM235A6NFC5 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC12.02□□□□□ -0.49
TMEM235A6NFC5 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
TMEM235A6NFC5 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC12.02□□□□□ -0.49
TMEM235A6NFC5 BCL2L1-203ENST00000376062 2578 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
TMEM235A6NFC5 SGSM3-201ENST00000248929 2969 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
TMEM235A6NFC5 TXLNA-201ENST00000373609 5012 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
TMEM235A6NFC5 SERPINB1-201ENST00000380739 2619 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
TMEM235A6NFC5 WASHC1-201ENST00000442898 1827 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
TMEM235A6NFC5 SEC31A-205ENST00000395310 4259 ntAPPRIS P4 TSL 1 (best) BASIC12.02□□□□□ -0.49
TMEM235A6NFC5 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC12.02□□□□□ -0.49
TMEM235A6NFC5 DRG2-202ENST00000395726 1897 ntTSL 5 BASIC12.02□□□□□ -0.49
TMEM235A6NFC5 KRT8P4-201ENST00000509735 1454 ntBASIC12.02□□□□□ -0.49
TMEM235A6NFC5 TTC39A-202ENST00000262676 6287 ntTSL 2 BASIC12.01□□□□□ -0.49
TMEM235A6NFC5 RERE-202ENST00000377464 6733 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
TMEM235A6NFC5 IL2RG-203ENST00000374202 1534 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
TMEM235A6NFC5 RANBP17-219ENST00000523189 4588 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
TMEM235A6NFC5 AC022364.1-202ENST00000617468 2409 ntBASIC12.01□□□□□ -0.49
TMEM235A6NFC5 SLC5A4-201ENST00000266086 2030 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
TMEM235A6NFC5 Z98885.2-201ENST00000565177 1567 ntTSL 2 BASIC12.01□□□□□ -0.49
TMEM235A6NFC5 FCHO1-221ENST00000597512 2934 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
TMEM235A6NFC5 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC12.01□□□□□ -0.49
TMEM235A6NFC5 IKZF1-206ENST00000359197 3487 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
TMEM235A6NFC5 FMO6P-201ENST00000236166 1620 ntBASIC12.01□□□□□ -0.49
TMEM235A6NFC5 SCNN1B-202ENST00000343070 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
TMEM235A6NFC5 RSBN1L-201ENST00000334955 6422 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
TMEM235A6NFC5 XBP1-204ENST00000405219 1690 ntTSL 2 BASIC12.01□□□□□ -0.49
TMEM235A6NFC5 BCL2L2-201ENST00000250405 3605 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
TMEM235A6NFC5 MCM2-201ENST00000265056 3622 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
TMEM235A6NFC5 CDK5RAP1-203ENST00000357886 2164 ntTSL 5 BASIC12.01□□□□□ -0.49
TMEM235A6NFC5 BDNF-208ENST00000418212 4125 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
TMEM235A6NFC5 ZFYVE27-205ENST00000370613 2669 ntTSL 2 BASIC12.01□□□□□ -0.49
TMEM235A6NFC5 MARK2P16-201ENST00000605714 1723 ntBASIC12.01□□□□□ -0.49
TMEM235A6NFC5 LCA5-202ENST00000392959 4719 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
TMEM235A6NFC5 HTR2C-201ENST00000276198 4751 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
TMEM235A6NFC5 NKX2-1-AS1-201ENST00000521292 1775 ntTSL 2 BASIC12.01□□□□□ -0.49
TMEM235A6NFC5 ZNF493-208ENST00000599461 1769 ntBASIC12.01□□□□□ -0.49
TMEM235A6NFC5 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
TMEM235A6NFC5 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
TMEM235A6NFC5 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
TMEM235A6NFC5 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
TMEM235A6NFC5 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC12.01□□□□□ -0.49
TMEM235A6NFC5 AL355864.2-201ENST00000447420 863 ntBASIC12.01□□□□□ -0.49
TMEM235A6NFC5 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC12.01□□□□□ -0.49
TMEM235A6NFC5 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
TMEM235A6NFC5 RBM8B-201ENST00000555532 525 ntBASIC12.01□□□□□ -0.49
TMEM235A6NFC5 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC12.01□□□□□ -0.49
TMEM235A6NFC5 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC12.01□□□□□ -0.49
TMEM235A6NFC5 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
TMEM235A6NFC5 AC010319.3-201ENST00000597028 470 ntBASIC12.01□□□□□ -0.49
TMEM235A6NFC5 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC12.01□□□□□ -0.49
TMEM235A6NFC5 AC090386.2-201ENST00000623010 1039 ntBASIC12.01□□□□□ -0.49
TMEM235A6NFC5 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC12.01□□□□□ -0.49
TMEM235A6NFC5 MYRF-202ENST00000278836 5927 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
TMEM235A6NFC5 ITGA5-201ENST00000293379 4444 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
TMEM235A6NFC5 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 90.9 ms