Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
CCDC187A0A096LP49 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
CCDC187A0A096LP49 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
CCDC187A0A096LP49 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
CCDC187A0A096LP49 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC13.21□□□□□ -0.29
CCDC187A0A096LP49 PRL-201ENST00000306482 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CCDC187A0A096LP49 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
CCDC187A0A096LP49 SFXN4-201ENST00000355697 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CCDC187A0A096LP49 ATF4-203ENST00000404241 1910 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
CCDC187A0A096LP49 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
CCDC187A0A096LP49 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
CCDC187A0A096LP49 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
CCDC187A0A096LP49 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CCDC187A0A096LP49 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC13.21□□□□□ -0.29
CCDC187A0A096LP49 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC13.21□□□□□ -0.29
CCDC187A0A096LP49 FBXO16-202ENST00000380254 1343 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
CCDC187A0A096LP49 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CCDC187A0A096LP49 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
CCDC187A0A096LP49 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC13.21□□□□□ -0.29
CCDC187A0A096LP49 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC13.21□□□□□ -0.29
CCDC187A0A096LP49 KCP-203ENST00000610776 5108 ntTSL 5 BASIC13.21□□□□□ -0.29
CCDC187A0A096LP49 TNNT3-201ENST00000278317 1210 ntAPPRIS P3 TSL 5 BASIC13.21□□□□□ -0.29
CCDC187A0A096LP49 FLAD1-202ENST00000295530 1211 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CCDC187A0A096LP49 PCBD1-201ENST00000299299 1006 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CCDC187A0A096LP49 SIRPB3P-201ENST00000340424 1216 ntBASIC13.21□□□□□ -0.29
CCDC187A0A096LP49 CLCC1-202ENST00000348264 1124 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CCDC187A0A096LP49 RHOC-205ENST00000369636 786 ntTSL 2 BASIC13.21□□□□□ -0.29
CCDC187A0A096LP49 RHOC-207ENST00000369638 1028 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
CCDC187A0A096LP49 TNNT3-207ENST00000381589 1060 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
CCDC187A0A096LP49 KRTAP4-12-201ENST00000394014 1077 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
CCDC187A0A096LP49 AC104961.1-201ENST00000427605 771 ntBASIC13.21□□□□□ -0.29
CCDC187A0A096LP49 BX248123.1-201ENST00000429070 606 ntTSL 3 BASIC13.21□□□□□ -0.29
CCDC187A0A096LP49 MED19-202ENST00000431606 1203 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CCDC187A0A096LP49 AL137026.2-201ENST00000437014 841 ntTSL 2 BASIC13.21□□□□□ -0.29
CCDC187A0A096LP49 AL109924.1-201ENST00000444586 914 ntTSL 3 BASIC13.21□□□□□ -0.29
CCDC187A0A096LP49 AL121787.1-202ENST00000445838 876 ntTSL 5 BASIC13.21□□□□□ -0.29
CCDC187A0A096LP49 C3orf38-204ENST00000486971 1259 ntTSL 2 BASIC13.21□□□□□ -0.29
CCDC187A0A096LP49 ALG1L7P-201ENST00000502317 768 ntBASIC13.21□□□□□ -0.29
CCDC187A0A096LP49 HNRNPA1P16-201ENST00000575692 955 ntBASIC13.21□□□□□ -0.29
CCDC187A0A096LP49 AC139713.2-207ENST00000641556 1292 ntBASIC13.21□□□□□ -0.29
CCDC187A0A096LP49 LGALS4-201ENST00000307751 1535 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CCDC187A0A096LP49 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CCDC187A0A096LP49 AC015909.5-201ENST00000624336 2266 ntBASIC13.21□□□□□ -0.29
CCDC187A0A096LP49 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CCDC187A0A096LP49 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC13.21□□□□□ -0.29
CCDC187A0A096LP49 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
CCDC187A0A096LP49 EZH2-202ENST00000350995 2477 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CCDC187A0A096LP49 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CCDC187A0A096LP49 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CCDC187A0A096LP49 PES1P2-201ENST00000449745 1735 ntBASIC13.21□□□□□ -0.3
CCDC187A0A096LP49 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC13.21□□□□□ -0.3
CCDC187A0A096LP49 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
CCDC187A0A096LP49 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.3
CCDC187A0A096LP49 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
CCDC187A0A096LP49 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
CCDC187A0A096LP49 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
CCDC187A0A096LP49 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
CCDC187A0A096LP49 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
CCDC187A0A096LP49 PHKG1-201ENST00000297373 1431 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
CCDC187A0A096LP49 C20orf96-202ENST00000382369 1420 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
CCDC187A0A096LP49 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
CCDC187A0A096LP49 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
CCDC187A0A096LP49 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC13.21□□□□□ -0.3
CCDC187A0A096LP49 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CCDC187A0A096LP49 CMIP-202ENST00000537098 4357 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CCDC187A0A096LP49 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
CCDC187A0A096LP49 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CCDC187A0A096LP49 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CCDC187A0A096LP49 CFAP36-204ENST00000406691 1575 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CCDC187A0A096LP49 AC067750.1-201ENST00000608826 6545 ntBASIC13.2□□□□□ -0.3
CCDC187A0A096LP49 AL390755.1-201ENST00000623716 2027 ntBASIC13.2□□□□□ -0.3
CCDC187A0A096LP49 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC13.2□□□□□ -0.3
CCDC187A0A096LP49 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CCDC187A0A096LP49 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CCDC187A0A096LP49 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
CCDC187A0A096LP49 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC13.2□□□□□ -0.3
CCDC187A0A096LP49 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
CCDC187A0A096LP49 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CCDC187A0A096LP49 DAD1-201ENST00000250498 731 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CCDC187A0A096LP49 LCN6-201ENST00000341206 717 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CCDC187A0A096LP49 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
CCDC187A0A096LP49 CST1-202ENST00000398402 655 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
CCDC187A0A096LP49 COLEC11-204ENST00000402794 1134 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CCDC187A0A096LP49 RPL10-203ENST00000406022 748 ntTSL 3 BASIC13.2□□□□□ -0.3
CCDC187A0A096LP49 AL157832.2-206ENST00000428178 601 ntTSL 3 BASIC13.2□□□□□ -0.3
CCDC187A0A096LP49 EHMT2-AS1-201ENST00000434689 373 ntTSL 3 BASIC13.2□□□□□ -0.3
CCDC187A0A096LP49 BX072579.1-201ENST00000449453 344 ntTSL 3 BASIC13.2□□□□□ -0.3
CCDC187A0A096LP49 AC025171.3-201ENST00000509036 472 ntTSL 2 BASIC13.2□□□□□ -0.3
CCDC187A0A096LP49 IGHEP2-201ENST00000519308 1256 ntBASIC13.2□□□□□ -0.3
CCDC187A0A096LP49 NR4A1-209ENST00000548232 1101 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CCDC187A0A096LP49 SLC25A3-215ENST00000551265 580 ntTSL 4 BASIC13.2□□□□□ -0.3
CCDC187A0A096LP49 AC017033.1-201ENST00000603720 708 ntTSL 2 BASIC13.2□□□□□ -0.3
CCDC187A0A096LP49 AC090004.1-201ENST00000608606 653 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
CCDC187A0A096LP49 MIR8071-1-201ENST00000616769 65 ntBASIC13.2□□□□□ -0.3
CCDC187A0A096LP49 MIR8071-2-201ENST00000616772 65 ntBASIC13.2□□□□□ -0.3
CCDC187A0A096LP49 AC126755.5-201ENST00000622756 267 ntBASIC13.2□□□□□ -0.3
CCDC187A0A096LP49 IDH3A-224ENST00000629769 114 ntTSL 5 BASIC13.2□□□□□ -0.3
CCDC187A0A096LP49 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
CCDC187A0A096LP49 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CCDC187A0A096LP49 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC13.2□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms