Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 AC087269.1-202ENST00000519147 400 ntTSL 3 BASIC14.15□□□□□ -0.14
PCDHGC4Q9Y5F7 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC14.15□□□□□ -0.14
PCDHGC4Q9Y5F7 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC14.15□□□□□ -0.14
PCDHGC4Q9Y5F7 PRKXP1-201ENST00000561423 1122 ntBASIC14.15□□□□□ -0.14
PCDHGC4Q9Y5F7 AC145285.5-201ENST00000562217 361 ntBASIC14.15□□□□□ -0.14
PCDHGC4Q9Y5F7 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC14.15□□□□□ -0.14
PCDHGC4Q9Y5F7 RN7SL275P-201ENST00000582762 335 ntBASIC14.15□□□□□ -0.14
PCDHGC4Q9Y5F7 SIGLEC22P-201ENST00000599104 714 ntBASIC14.15□□□□□ -0.14
PCDHGC4Q9Y5F7 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC14.15□□□□□ -0.14
PCDHGC4Q9Y5F7 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC14.15□□□□□ -0.14
PCDHGC4Q9Y5F7 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC14.15□□□□□ -0.14
PCDHGC4Q9Y5F7 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC14.15□□□□□ -0.14
PCDHGC4Q9Y5F7 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PCDHGC4Q9Y5F7 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
PCDHGC4Q9Y5F7 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PCDHGC4Q9Y5F7 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
PCDHGC4Q9Y5F7 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC14.15□□□□□ -0.14
PCDHGC4Q9Y5F7 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
PCDHGC4Q9Y5F7 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PCDHGC4Q9Y5F7 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC14.15□□□□□ -0.14
PCDHGC4Q9Y5F7 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PCDHGC4Q9Y5F7 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
PCDHGC4Q9Y5F7 LSS-201ENST00000356396 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PCDHGC4Q9Y5F7 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
PCDHGC4Q9Y5F7 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PCDHGC4Q9Y5F7 AC138761.6-201ENST00000583997 1423 ntBASIC14.15□□□□□ -0.14
PCDHGC4Q9Y5F7 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC14.15□□□□□ -0.14
PCDHGC4Q9Y5F7 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC14.15□□□□□ -0.14
PCDHGC4Q9Y5F7 USP3-204ENST00000540797 5474 ntTSL 2 BASIC14.14□□□□□ -0.15
PCDHGC4Q9Y5F7 MIER1-202ENST00000355977 3595 ntTSL 5 BASIC14.14□□□□□ -0.15
PCDHGC4Q9Y5F7 SYT4-205ENST00000590752 1765 ntTSL 2 BASIC14.14□□□□□ -0.15
PCDHGC4Q9Y5F7 OR6F1-204ENST00000641470 1762 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
PCDHGC4Q9Y5F7 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC14.14□□□□□ -0.15
PCDHGC4Q9Y5F7 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PCDHGC4Q9Y5F7 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
PCDHGC4Q9Y5F7 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC14.14□□□□□ -0.15
PCDHGC4Q9Y5F7 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
PCDHGC4Q9Y5F7 AL356753.1-201ENST00000427035 2018 ntTSL 2 BASIC14.14□□□□□ -0.15
PCDHGC4Q9Y5F7 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
PCDHGC4Q9Y5F7 UROC1-201ENST00000290868 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PCDHGC4Q9Y5F7 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC14.14□□□□□ -0.15
PCDHGC4Q9Y5F7 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC14.14□□□□□ -0.15
PCDHGC4Q9Y5F7 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PCDHGC4Q9Y5F7 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
PCDHGC4Q9Y5F7 AL512430.1-201ENST00000392575 860 ntBASIC14.14□□□□□ -0.15
PCDHGC4Q9Y5F7 GSTT2-201ENST00000402588 937 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
PCDHGC4Q9Y5F7 LINC00265-2P-201ENST00000413372 782 ntBASIC14.14□□□□□ -0.15
PCDHGC4Q9Y5F7 AL627422.1-201ENST00000434104 580 ntBASIC14.14□□□□□ -0.15
PCDHGC4Q9Y5F7 ALKBH2-203ENST00000440112 574 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
PCDHGC4Q9Y5F7 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC14.14□□□□□ -0.15
PCDHGC4Q9Y5F7 FRMD4A-204ENST00000475141 1233 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
PCDHGC4Q9Y5F7 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC14.14□□□□□ -0.15
PCDHGC4Q9Y5F7 FAM60A-207ENST00000542983 738 ntTSL 4 BASIC14.14□□□□□ -0.15
PCDHGC4Q9Y5F7 C12orf73-210ENST00000552940 685 ntTSL 2 BASIC14.14□□□□□ -0.15
PCDHGC4Q9Y5F7 ADAMTSL4-AS1-203ENST00000617352 1036 ntTSL 5 BASIC14.14□□□□□ -0.15
PCDHGC4Q9Y5F7 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
PCDHGC4Q9Y5F7 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PCDHGC4Q9Y5F7 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
PCDHGC4Q9Y5F7 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
PCDHGC4Q9Y5F7 SLC37A3-201ENST00000326232 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PCDHGC4Q9Y5F7 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PCDHGC4Q9Y5F7 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
PCDHGC4Q9Y5F7 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PCDHGC4Q9Y5F7 WASF3-202ENST00000361042 4823 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
PCDHGC4Q9Y5F7 DSG1-202ENST00000462981 1857 ntTSL 2 BASIC14.14□□□□□ -0.15
PCDHGC4Q9Y5F7 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
PCDHGC4Q9Y5F7 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
PCDHGC4Q9Y5F7 OPRL1-202ENST00000349451 3369 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PCDHGC4Q9Y5F7 CHI3L1-201ENST00000255409 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PCDHGC4Q9Y5F7 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
PCDHGC4Q9Y5F7 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
PCDHGC4Q9Y5F7 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PCDHGC4Q9Y5F7 LINC01535-206ENST00000592712 1699 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
PCDHGC4Q9Y5F7 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PCDHGC4Q9Y5F7 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PCDHGC4Q9Y5F7 FAM122B-201ENST00000298090 2706 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
PCDHGC4Q9Y5F7 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PCDHGC4Q9Y5F7 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PCDHGC4Q9Y5F7 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
PCDHGC4Q9Y5F7 INSC-205ENST00000525218 1576 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
PCDHGC4Q9Y5F7 AC015909.5-201ENST00000624336 2266 ntBASIC14.13□□□□□ -0.15
PCDHGC4Q9Y5F7 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PCDHGC4Q9Y5F7 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
PCDHGC4Q9Y5F7 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
PCDHGC4Q9Y5F7 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PCDHGC4Q9Y5F7 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
PCDHGC4Q9Y5F7 SALL2-205ENST00000611430 1466 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
PCDHGC4Q9Y5F7 TEX26-AS1-205ENST00000585870 2053 ntTSL 2 BASIC14.13□□□□□ -0.15
PCDHGC4Q9Y5F7 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PCDHGC4Q9Y5F7 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
PCDHGC4Q9Y5F7 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC14.13□□□□□ -0.15
PCDHGC4Q9Y5F7 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
PCDHGC4Q9Y5F7 PRUNE1-205ENST00000368937 1850 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
PCDHGC4Q9Y5F7 GLP2R-204ENST00000574745 1882 ntTSL 2 BASIC14.13□□□□□ -0.15
PCDHGC4Q9Y5F7 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
PCDHGC4Q9Y5F7 BCL2L11-202ENST00000337565 720 ntTSL 5 BASIC14.13□□□□□ -0.15
PCDHGC4Q9Y5F7 AP000356.3-201ENST00000382243 753 ntBASIC14.13□□□□□ -0.15
PCDHGC4Q9Y5F7 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PCDHGC4Q9Y5F7 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
PCDHGC4Q9Y5F7 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC14.13□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms