Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC20.12■□□□□ 0.81
SHANK2Q9UPX8 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SHANK2Q9UPX8 NGLY1-205ENST00000417874 2062 ntTSL 2 BASIC20.12■□□□□ 0.81
SHANK2Q9UPX8 SERPING1-202ENST00000340687 1719 ntTSL 5 BASIC20.12■□□□□ 0.81
SHANK2Q9UPX8 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC20.12■□□□□ 0.81
SHANK2Q9UPX8 CNTNAP2-207ENST00000628930 1944 ntTSL 2 BASIC20.12■□□□□ 0.81
SHANK2Q9UPX8 OPN4-201ENST00000241891 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SHANK2Q9UPX8 AC135506.1-201ENST00000603877 1799 ntBASIC20.12■□□□□ 0.81
SHANK2Q9UPX8 NCLP1-201ENST00000445357 1963 ntBASIC20.12■□□□□ 0.81
SHANK2Q9UPX8 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
SHANK2Q9UPX8 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SHANK2Q9UPX8 ABI2-213ENST00000424558 2240 ntTSL 2 BASIC20.12■□□□□ 0.81
SHANK2Q9UPX8 SLC43A3-214ENST00000529554 2207 ntAPPRIS P3 TSL 2 BASIC20.12■□□□□ 0.81
SHANK2Q9UPX8 LYPLA2-203ENST00000374503 868 ntTSL 2 BASIC20.11■□□□□ 0.81
SHANK2Q9UPX8 RPS7-202ENST00000403564 764 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
SHANK2Q9UPX8 Z82185.1-201ENST00000417792 549 ntTSL 4 BASIC20.11■□□□□ 0.81
SHANK2Q9UPX8 AC007383.2-201ENST00000420509 752 ntTSL 2 BASIC20.11■□□□□ 0.81
SHANK2Q9UPX8 AL121894.1-201ENST00000450971 436 ntTSL 2 BASIC20.11■□□□□ 0.81
SHANK2Q9UPX8 CLNK-203ENST00000507719 1143 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SHANK2Q9UPX8 C1orf198-207ENST00000523410 1041 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
SHANK2Q9UPX8 RN7SL480P-201ENST00000581481 294 ntBASIC20.11■□□□□ 0.81
SHANK2Q9UPX8 ZNF235-203ENST00000589248 532 ntTSL 3 BASIC20.11■□□□□ 0.81
SHANK2Q9UPX8 ITGB2-AS1-204ENST00000609592 482 ntTSL 5 BASIC20.11■□□□□ 0.81
SHANK2Q9UPX8 TMEM230-211ENST00000615008 594 ntTSL 4 BASIC20.11■□□□□ 0.81
SHANK2Q9UPX8 MFSD12-215ENST00000615613 688 ntBASIC20.11■□□□□ 0.81
SHANK2Q9UPX8 Metazoa_SRP.156-201ENST00000622344 262 ntBASIC20.11■□□□□ 0.81
SHANK2Q9UPX8 LINC00969-322ENST00000630170 584 ntTSL 5 BASIC20.11■□□□□ 0.81
SHANK2Q9UPX8 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
SHANK2Q9UPX8 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SHANK2Q9UPX8 ATF4P4-201ENST00000393544 1930 ntBASIC20.11■□□□□ 0.81
SHANK2Q9UPX8 ASS1-203ENST00000372393 1548 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
SHANK2Q9UPX8 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
SHANK2Q9UPX8 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
SHANK2Q9UPX8 MCOLN3-201ENST00000341115 1762 ntTSL 2 BASIC20.11■□□□□ 0.81
SHANK2Q9UPX8 CDCA7L-201ENST00000356195 2915 ntTSL 2 BASIC20.11■□□□□ 0.81
SHANK2Q9UPX8 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
SHANK2Q9UPX8 TRIML2-207ENST00000512729 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SHANK2Q9UPX8 TESPA1-201ENST00000316577 1898 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
SHANK2Q9UPX8 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SHANK2Q9UPX8 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SHANK2Q9UPX8 IQCF1-201ENST00000310914 695 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SHANK2Q9UPX8 ZCCHC7-201ENST00000322831 1219 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SHANK2Q9UPX8 MARCKSL1P2-201ENST00000401037 976 ntBASIC20.11■□□□□ 0.81
SHANK2Q9UPX8 AC024028.1-201ENST00000437145 437 ntTSL 3 BASIC20.11■□□□□ 0.81
SHANK2Q9UPX8 AP001102.1-201ENST00000528959 409 ntBASIC20.11■□□□□ 0.81
SHANK2Q9UPX8 MIEF2-206ENST00000578174 589 ntTSL 4 BASIC20.11■□□□□ 0.81
SHANK2Q9UPX8 AC025048.4-201ENST00000589740 699 ntTSL 3 BASIC20.11■□□□□ 0.81
SHANK2Q9UPX8 AC018766.1-201ENST00000601211 484 ntTSL 3 BASIC20.11■□□□□ 0.81
SHANK2Q9UPX8 FCGR3A-208ENST00000638849 873 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SHANK2Q9UPX8 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SHANK2Q9UPX8 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SHANK2Q9UPX8 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC20.11■□□□□ 0.81
SHANK2Q9UPX8 DNAJB8-201ENST00000319153 2465 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SHANK2Q9UPX8 TUBD1-202ENST00000340993 1769 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SHANK2Q9UPX8 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
SHANK2Q9UPX8 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SHANK2Q9UPX8 SNRNP27-201ENST00000244227 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SHANK2Q9UPX8 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
SHANK2Q9UPX8 C1QTNF9-202ENST00000382071 1854 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
SHANK2Q9UPX8 LIMS1-204ENST00000409441 1627 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SHANK2Q9UPX8 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
SHANK2Q9UPX8 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
SHANK2Q9UPX8 ATF3-202ENST00000341491 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SHANK2Q9UPX8 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
SHANK2Q9UPX8 OR6D1P-203ENST00000641209 4860 ntBASIC20.1■□□□□ 0.81
SHANK2Q9UPX8 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
SHANK2Q9UPX8 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC20.1■□□□□ 0.81
SHANK2Q9UPX8 IZUMO1R-201ENST00000328458 798 ntAPPRIS P2 TSL 5 BASIC20.1■□□□□ 0.81
SHANK2Q9UPX8 MRPL55-207ENST00000366733 834 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
SHANK2Q9UPX8 NR1I3-201ENST00000367979 1074 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SHANK2Q9UPX8 NR1I3-207ENST00000367985 1074 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SHANK2Q9UPX8 AC231533.1-201ENST00000416061 925 ntTSL 3 BASIC20.1■□□□□ 0.81
SHANK2Q9UPX8 CBR3-AS1-202ENST00000427491 741 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SHANK2Q9UPX8 AC004889.1-201ENST00000498693 856 ntTSL 5 BASIC20.1■□□□□ 0.81
SHANK2Q9UPX8 NR1I3-225ENST00000508387 634 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SHANK2Q9UPX8 NMNAT3-212ENST00000511444 873 ntTSL 3 BASIC20.1■□□□□ 0.81
SHANK2Q9UPX8 AP000640.1-201ENST00000525337 879 ntTSL 2 BASIC20.1■□□□□ 0.81
SHANK2Q9UPX8 AL031710.1-201ENST00000570022 468 ntTSL 2 BASIC20.1■□□□□ 0.81
SHANK2Q9UPX8 AC127496.3-201ENST00000576032 494 ntTSL 3 BASIC20.1■□□□□ 0.81
SHANK2Q9UPX8 LINC01444-201ENST00000580867 764 ntTSL 2 BASIC20.1■□□□□ 0.81
SHANK2Q9UPX8 CBR3-AS1-207ENST00000608641 777 ntTSL 5 BASIC20.1■□□□□ 0.81
SHANK2Q9UPX8 SFTPA2-205ENST00000640627 195 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SHANK2Q9UPX8 GDPD5-215ENST00000533805 2424 ntTSL 2 BASIC20.1■□□□□ 0.81
SHANK2Q9UPX8 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
SHANK2Q9UPX8 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC20.09■□□□□ 0.81
SHANK2Q9UPX8 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
SHANK2Q9UPX8 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SHANK2Q9UPX8 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
SHANK2Q9UPX8 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SHANK2Q9UPX8 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
SHANK2Q9UPX8 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SHANK2Q9UPX8 KLHL32-206ENST00000544166 2864 ntTSL 2 BASIC20.09■□□□□ 0.81
SHANK2Q9UPX8 AC072061.1-201ENST00000569710 2234 ntBASIC20.09■□□□□ 0.81
SHANK2Q9UPX8 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SHANK2Q9UPX8 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC20.09■□□□□ 0.81
SHANK2Q9UPX8 RBM25-204ENST00000526754 1567 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SHANK2Q9UPX8 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
SHANK2Q9UPX8 KRTAP10-11-201ENST00000334670 1237 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
SHANK2Q9UPX8 AC015691.1-201ENST00000394793 535 ntTSL 3 BASIC20.09■□□□□ 0.81
SHANK2Q9UPX8 AP001331.1-201ENST00000413008 1015 ntBASIC20.09■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms