Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
ZC3H4Q9UPT8 ECI2-201ENST00000361538 1380 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
ZC3H4Q9UPT8 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ZC3H4Q9UPT8 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC16.71■□□□□ 0.27
ZC3H4Q9UPT8 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
ZC3H4Q9UPT8 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
ZC3H4Q9UPT8 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
ZC3H4Q9UPT8 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ZC3H4Q9UPT8 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
ZC3H4Q9UPT8 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ZC3H4Q9UPT8 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC16.71■□□□□ 0.27
ZC3H4Q9UPT8 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
ZC3H4Q9UPT8 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ZC3H4Q9UPT8 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC16.71■□□□□ 0.27
ZC3H4Q9UPT8 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ZC3H4Q9UPT8 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
ZC3H4Q9UPT8 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
ZC3H4Q9UPT8 AL031590.1-202ENST00000641466 1737 ntBASIC16.71■□□□□ 0.27
ZC3H4Q9UPT8 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.26
ZC3H4Q9UPT8 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.26
ZC3H4Q9UPT8 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
ZC3H4Q9UPT8 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.26
ZC3H4Q9UPT8 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
ZC3H4Q9UPT8 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC16.71■□□□□ 0.26
ZC3H4Q9UPT8 AC007383.2-201ENST00000420509 752 ntTSL 2 BASIC16.7■□□□□ 0.26
ZC3H4Q9UPT8 RBPMSLP-201ENST00000433427 502 ntBASIC16.7■□□□□ 0.26
ZC3H4Q9UPT8 HNRNPA1P3-201ENST00000440968 551 ntBASIC16.7■□□□□ 0.26
ZC3H4Q9UPT8 RBM14-205ENST00000443702 732 ntTSL 3 BASIC16.7■□□□□ 0.26
ZC3H4Q9UPT8 ALDOAP1-201ENST00000491506 1078 ntBASIC16.7■□□□□ 0.26
ZC3H4Q9UPT8 IMMP1L-215ENST00000534812 612 ntTSL 2 BASIC16.7■□□□□ 0.26
ZC3H4Q9UPT8 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC16.7■□□□□ 0.26
ZC3H4Q9UPT8 AC100786.1-201ENST00000583018 513 ntTSL 3 BASIC16.7■□□□□ 0.26
ZC3H4Q9UPT8 BOLA3P2-201ENST00000586496 323 ntBASIC16.7■□□□□ 0.26
ZC3H4Q9UPT8 AC008982.2-201ENST00000600473 493 ntTSL 5 BASIC16.7■□□□□ 0.26
ZC3H4Q9UPT8 HIST1H3E-201ENST00000614911 462 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
ZC3H4Q9UPT8 AC139100.2-201ENST00000616901 662 ntBASIC16.7■□□□□ 0.26
ZC3H4Q9UPT8 AL590094.1-208ENST00000636917 627 ntTSL 5 BASIC16.7■□□□□ 0.26
ZC3H4Q9UPT8 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ZC3H4Q9UPT8 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
ZC3H4Q9UPT8 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ZC3H4Q9UPT8 AC097474.1-201ENST00000506481 1371 ntBASIC16.7■□□□□ 0.26
ZC3H4Q9UPT8 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ZC3H4Q9UPT8 NAAA-203ENST00000505594 1425 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
ZC3H4Q9UPT8 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
ZC3H4Q9UPT8 WNT8A-202ENST00000398754 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ZC3H4Q9UPT8 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ZC3H4Q9UPT8 KCNIP1-210ENST00000636734 1613 ntTSL 5 BASIC16.7■□□□□ 0.26
ZC3H4Q9UPT8 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
ZC3H4Q9UPT8 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ZC3H4Q9UPT8 MEFV-203ENST00000536379 1713 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
ZC3H4Q9UPT8 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC16.7■□□□□ 0.26
ZC3H4Q9UPT8 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ZC3H4Q9UPT8 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC16.7■□□□□ 0.26
ZC3H4Q9UPT8 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ZC3H4Q9UPT8 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
ZC3H4Q9UPT8 AC015909.5-201ENST00000624336 2266 ntBASIC16.7■□□□□ 0.26
ZC3H4Q9UPT8 FGD5P1-202ENST00000614866 2498 ntBASIC16.7■□□□□ 0.26
ZC3H4Q9UPT8 POP5-201ENST00000341039 913 ntTSL 2 BASIC16.7■□□□□ 0.26
ZC3H4Q9UPT8 HYKK-201ENST00000388988 1235 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
ZC3H4Q9UPT8 MRPL55-219ENST00000391867 685 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
ZC3H4Q9UPT8 CRYZL1-205ENST00000399442 612 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
ZC3H4Q9UPT8 U3.41-201ENST00000408711 219 ntBASIC16.7■□□□□ 0.26
ZC3H4Q9UPT8 SDCBP2P1-201ENST00000416115 614 ntBASIC16.7■□□□□ 0.26
ZC3H4Q9UPT8 RPSAP6-201ENST00000417882 882 ntBASIC16.7■□□□□ 0.26
ZC3H4Q9UPT8 HNF1A-AS1-201ENST00000433033 612 ntTSL 3 BASIC16.7■□□□□ 0.26
ZC3H4Q9UPT8 AL035078.1-201ENST00000531962 820 ntTSL 5 BASIC16.7■□□□□ 0.26
ZC3H4Q9UPT8 BCL2L2-PABPN1-201ENST00000553781 1241 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
ZC3H4Q9UPT8 AC026150.1-201ENST00000562992 701 ntTSL 5 BASIC16.7■□□□□ 0.26
ZC3H4Q9UPT8 SEPT4-AS1-203ENST00000580769 1000 ntTSL 3 BASIC16.7■□□□□ 0.26
ZC3H4Q9UPT8 AC136475.7-201ENST00000602949 592 ntBASIC16.7■□□□□ 0.26
ZC3H4Q9UPT8 AC134878.2-201ENST00000620700 1265 ntBASIC16.7■□□□□ 0.26
ZC3H4Q9UPT8 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ZC3H4Q9UPT8 MPZL3-204ENST00000527472 1381 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
ZC3H4Q9UPT8 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
ZC3H4Q9UPT8 KRT8P38-201ENST00000441370 1430 ntBASIC16.69■□□□□ 0.26
ZC3H4Q9UPT8 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC16.69■□□□□ 0.26
ZC3H4Q9UPT8 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
ZC3H4Q9UPT8 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
ZC3H4Q9UPT8 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC16.69■□□□□ 0.26
ZC3H4Q9UPT8 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ZC3H4Q9UPT8 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ZC3H4Q9UPT8 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC16.69■□□□□ 0.26
ZC3H4Q9UPT8 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ZC3H4Q9UPT8 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC16.69■□□□□ 0.26
ZC3H4Q9UPT8 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
ZC3H4Q9UPT8 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC16.69■□□□□ 0.26
ZC3H4Q9UPT8 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC16.69■□□□□ 0.26
ZC3H4Q9UPT8 SAP18-201ENST00000382533 2298 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
ZC3H4Q9UPT8 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ZC3H4Q9UPT8 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ZC3H4Q9UPT8 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ZC3H4Q9UPT8 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ZC3H4Q9UPT8 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
ZC3H4Q9UPT8 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ZC3H4Q9UPT8 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC16.69■□□□□ 0.26
ZC3H4Q9UPT8 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
ZC3H4Q9UPT8 AL591499.1-201ENST00000307155 1153 ntBASIC16.69■□□□□ 0.26
ZC3H4Q9UPT8 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC16.69■□□□□ 0.26
ZC3H4Q9UPT8 MRPL55-209ENST00000366735 1212 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ZC3H4Q9UPT8 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms