Protein–RNA interactions for Protein: Q9P2X8

LINC00474, Putative uncharacterized protein encoded by LINC00474, humanhuman

Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00474Q9P2X8 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
LINC00474Q9P2X8 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
LINC00474Q9P2X8 ITGA2B-201ENST00000262407 3333 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
LINC00474Q9P2X8 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC9.28□□□□□ -0.92
LINC00474Q9P2X8 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC9.28□□□□□ -0.92
LINC00474Q9P2X8 ATG9B-203ENST00000469530 3489 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
LINC00474Q9P2X8 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC9.28□□□□□ -0.92
LINC00474Q9P2X8 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC9.28□□□□□ -0.92
LINC00474Q9P2X8 SAMD14-202ENST00000330175 4425 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
LINC00474Q9P2X8 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
LINC00474Q9P2X8 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
LINC00474Q9P2X8 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC9.27□□□□□ -0.92
LINC00474Q9P2X8 KIFC3-211ENST00000562903 3221 ntTSL 1 (best) BASIC9.27□□□□□ -0.92
LINC00474Q9P2X8 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC9.27□□□□□ -0.92
LINC00474Q9P2X8 CAMSAP1-202ENST00000389532 7696 ntAPPRIS P2 TSL 5 BASIC9.27□□□□□ -0.92
LINC00474Q9P2X8 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC9.27□□□□□ -0.92
LINC00474Q9P2X8 TRIM4-203ENST00000355947 3383 ntAPPRIS P4 TSL 1 (best) BASIC9.27□□□□□ -0.92
LINC00474Q9P2X8 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC9.27□□□□□ -0.92
LINC00474Q9P2X8 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC9.27□□□□□ -0.92
LINC00474Q9P2X8 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC9.27□□□□□ -0.92
LINC00474Q9P2X8 STRA6-206ENST00000449139 2732 ntAPPRIS P1 TSL 5 BASIC9.27□□□□□ -0.92
LINC00474Q9P2X8 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC9.27□□□□□ -0.92
LINC00474Q9P2X8 AC004241.1-201ENST00000547799 3299 ntTSL 5 BASIC9.27□□□□□ -0.92
LINC00474Q9P2X8 DLGAP1-205ENST00000400150 5332 ntTSL 5 BASIC9.27□□□□□ -0.92
LINC00474Q9P2X8 ILF3-201ENST00000250241 3035 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
LINC00474Q9P2X8 TMEM130-201ENST00000339375 3015 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
LINC00474Q9P2X8 WASF3-202ENST00000361042 4823 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
LINC00474Q9P2X8 SPOUT1-201ENST00000361256 4286 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
LINC00474Q9P2X8 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC9.27□□□□□ -0.93
LINC00474Q9P2X8 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC9.27□□□□□ -0.93
LINC00474Q9P2X8 NR4A2-209ENST00000426264 2642 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
LINC00474Q9P2X8 TRMT2B-202ENST00000372936 3327 ntAPPRIS P3 TSL 1 (best) BASIC9.27□□□□□ -0.93
LINC00474Q9P2X8 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
LINC00474Q9P2X8 GREB1-206ENST00000396123 5296 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
LINC00474Q9P2X8 F2RL3-201ENST00000248076 3473 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
LINC00474Q9P2X8 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
LINC00474Q9P2X8 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC9.27□□□□□ -0.93
LINC00474Q9P2X8 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC9.27□□□□□ -0.93
LINC00474Q9P2X8 LSS-211ENST00000522411 2523 ntTSL 2 BASIC9.27□□□□□ -0.93
LINC00474Q9P2X8 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
LINC00474Q9P2X8 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.93
LINC00474Q9P2X8 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
LINC00474Q9P2X8 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
LINC00474Q9P2X8 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC9.27□□□□□ -0.93
LINC00474Q9P2X8 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.93
LINC00474Q9P2X8 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.93
LINC00474Q9P2X8 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
LINC00474Q9P2X8 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
LINC00474Q9P2X8 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC9.27□□□□□ -0.93
LINC00474Q9P2X8 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
LINC00474Q9P2X8 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC9.27□□□□□ -0.93
LINC00474Q9P2X8 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC9.27□□□□□ -0.93
LINC00474Q9P2X8 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC9.27□□□□□ -0.93
LINC00474Q9P2X8 AC006122.1-201ENST00000493323 440 ntBASIC9.27□□□□□ -0.93
LINC00474Q9P2X8 CD74-212ENST00000524315 584 ntTSL 5 BASIC9.27□□□□□ -0.93
LINC00474Q9P2X8 AP001258.2-201ENST00000529891 490 ntBASIC9.27□□□□□ -0.93
LINC00474Q9P2X8 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC9.27□□□□□ -0.93
LINC00474Q9P2X8 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC9.27□□□□□ -0.93
LINC00474Q9P2X8 MIR4259-201ENST00000584466 101 ntBASIC9.27□□□□□ -0.93
LINC00474Q9P2X8 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC9.27□□□□□ -0.93
LINC00474Q9P2X8 PRKN-211ENST00000615065 261 ntTSL 5 BASIC9.27□□□□□ -0.93
LINC00474Q9P2X8 AL096828.3-201ENST00000615354 462 ntBASIC9.27□□□□□ -0.93
LINC00474Q9P2X8 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC9.27□□□□□ -0.93
LINC00474Q9P2X8 AC138649.2-201ENST00000615886 705 ntBASIC9.27□□□□□ -0.93
LINC00474Q9P2X8 AC090386.2-201ENST00000623010 1039 ntBASIC9.27□□□□□ -0.93
LINC00474Q9P2X8 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC9.27□□□□□ -0.93
LINC00474Q9P2X8 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
LINC00474Q9P2X8 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC9.27□□□□□ -0.93
LINC00474Q9P2X8 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC9.27□□□□□ -0.93
LINC00474Q9P2X8 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
LINC00474Q9P2X8 WDR26-201ENST00000414423 6872 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
LINC00474Q9P2X8 FAS-202ENST00000352159 1722 ntTSL 5 BASIC9.27□□□□□ -0.93
LINC00474Q9P2X8 AC004899.1-201ENST00000424687 1714 ntBASIC9.27□□□□□ -0.93
LINC00474Q9P2X8 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC9.27□□□□□ -0.93
LINC00474Q9P2X8 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC9.27□□□□□ -0.93
LINC00474Q9P2X8 SLC4A2-201ENST00000392826 3947 ntAPPRIS ALT2 TSL 2 BASIC9.27□□□□□ -0.93
LINC00474Q9P2X8 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
LINC00474Q9P2X8 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC9.27□□□□□ -0.93
LINC00474Q9P2X8 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
LINC00474Q9P2X8 PDE5A-202ENST00000354960 7154 ntAPPRIS P3 TSL 1 (best) BASIC9.27□□□□□ -0.93
LINC00474Q9P2X8 MRVI1-216ENST00000547195 6155 ntTSL 2 BASIC9.27□□□□□ -0.93
LINC00474Q9P2X8 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
LINC00474Q9P2X8 EIF3A-201ENST00000369144 6646 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
LINC00474Q9P2X8 BAK1-203ENST00000442998 2212 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
LINC00474Q9P2X8 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
LINC00474Q9P2X8 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
LINC00474Q9P2X8 TCF3-201ENST00000262965 4451 ntAPPRIS P3 TSL 1 (best) BASIC9.27□□□□□ -0.93
LINC00474Q9P2X8 RAB3IP-212ENST00000550536 9646 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
LINC00474Q9P2X8 R3HDM2-204ENST00000402412 4372 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
LINC00474Q9P2X8 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
LINC00474Q9P2X8 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
LINC00474Q9P2X8 TRPM2-203ENST00000397928 6221 ntAPPRIS P3 TSL 1 (best) BASIC9.26□□□□□ -0.93
LINC00474Q9P2X8 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC9.26□□□□□ -0.93
LINC00474Q9P2X8 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC9.26□□□□□ -0.93
LINC00474Q9P2X8 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
LINC00474Q9P2X8 REXO1L6P-201ENST00000603433 1515 ntBASIC9.26□□□□□ -0.93
LINC00474Q9P2X8 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC9.26□□□□□ -0.93
LINC00474Q9P2X8 AC022497.1-201ENST00000624916 3691 ntBASIC9.26□□□□□ -0.93
LINC00474Q9P2X8 NLRP7-207ENST00000590030 3209 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
LINC00474Q9P2X8 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC9.26□□□□□ -0.93
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms