Protein–RNA interactions for Protein: Q9NUP7

TRMT13, tRNA:m(4)X modification enzyme TRM13 homolog, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRMT13Q9NUP7 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TRMT13Q9NUP7 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
TRMT13Q9NUP7 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
TRMT13Q9NUP7 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
TRMT13Q9NUP7 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
TRMT13Q9NUP7 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
TRMT13Q9NUP7 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
TRMT13Q9NUP7 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRMT13Q9NUP7 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRMT13Q9NUP7 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
TRMT13Q9NUP7 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRMT13Q9NUP7 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
TRMT13Q9NUP7 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRMT13Q9NUP7 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
TRMT13Q9NUP7 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC15.2■□□□□ 0.02
TRMT13Q9NUP7 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TRMT13Q9NUP7 SHISA5-206ENST00000426002 1839 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRMT13Q9NUP7 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC15.2■□□□□ 0.02
TRMT13Q9NUP7 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC15.2■□□□□ 0.02
TRMT13Q9NUP7 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC15.2■□□□□ 0.02
TRMT13Q9NUP7 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TRMT13Q9NUP7 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
TRMT13Q9NUP7 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
TRMT13Q9NUP7 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TRMT13Q9NUP7 CLUL1-202ENST00000400606 1943 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRMT13Q9NUP7 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
TRMT13Q9NUP7 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
TRMT13Q9NUP7 MRPL18-201ENST00000367034 978 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRMT13Q9NUP7 TMEM14B-201ENST00000379530 787 ntTSL 2 BASIC15.2■□□□□ 0.02
TRMT13Q9NUP7 PEMT-204ENST00000395783 1008 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRMT13Q9NUP7 PRAME-206ENST00000406503 740 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
TRMT13Q9NUP7 HDAC2-AS2-203ENST00000436876 591 ntTSL 5 BASIC15.2■□□□□ 0.02
TRMT13Q9NUP7 AC133141.1-201ENST00000443015 339 ntBASIC15.2■□□□□ 0.02
TRMT13Q9NUP7 PILRA-205ENST00000453419 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRMT13Q9NUP7 CHIC2-204ENST00000512964 711 ntTSL 5 BASIC15.2■□□□□ 0.02
TRMT13Q9NUP7 IGHEP1-201ENST00000521393 651 ntBASIC15.2■□□□□ 0.02
TRMT13Q9NUP7 AP003351.1-201ENST00000522743 668 ntTSL 3 BASIC15.2■□□□□ 0.02
TRMT13Q9NUP7 AC004801.1-201ENST00000549557 360 ntBASIC15.2■□□□□ 0.02
TRMT13Q9NUP7 AL139316.1-201ENST00000555643 568 ntTSL 3 BASIC15.2■□□□□ 0.02
TRMT13Q9NUP7 MKRN3-202ENST00000564592 629 ntTSL 3 BASIC15.2■□□□□ 0.02
TRMT13Q9NUP7 AC011489.1-201ENST00000586744 690 ntTSL 3 BASIC15.2■□□□□ 0.02
TRMT13Q9NUP7 AC008735.2-201ENST00000589456 549 ntTSL 5 BASIC15.2■□□□□ 0.02
TRMT13Q9NUP7 AC004686.1-201ENST00000605113 538 ntBASIC15.2■□□□□ 0.02
TRMT13Q9NUP7 AC011462.4-201ENST00000616866 449 ntBASIC15.2■□□□□ 0.02
TRMT13Q9NUP7 GSTT2-202ENST00000621118 1112 ntTSL 5 BASIC15.2■□□□□ 0.02
TRMT13Q9NUP7 AC048382.6-201ENST00000621980 1223 ntBASIC15.2■□□□□ 0.02
TRMT13Q9NUP7 BX322534.1-201ENST00000635574 241 ntBASIC15.2■□□□□ 0.02
TRMT13Q9NUP7 AC215524.1-201ENST00000635696 241 ntBASIC15.2■□□□□ 0.02
TRMT13Q9NUP7 DNAJC10-211ENST00000640034 888 ntTSL 5 BASIC15.2■□□□□ 0.02
TRMT13Q9NUP7 GNG14-201ENST00000640117 210 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
TRMT13Q9NUP7 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC15.2■□□□□ 0.02
TRMT13Q9NUP7 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRMT13Q9NUP7 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRMT13Q9NUP7 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRMT13Q9NUP7 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
TRMT13Q9NUP7 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRMT13Q9NUP7 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRMT13Q9NUP7 TUBA1B-202ENST00000336023 1627 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRMT13Q9NUP7 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC15.2■□□□□ 0.02
TRMT13Q9NUP7 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRMT13Q9NUP7 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TRMT13Q9NUP7 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC15.2■□□□□ 0.02
TRMT13Q9NUP7 CCNE2-201ENST00000308108 2724 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
TRMT13Q9NUP7 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRMT13Q9NUP7 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TRMT13Q9NUP7 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC15.2■□□□□ 0.02
TRMT13Q9NUP7 AC008620.2-201ENST00000510294 1569 ntBASIC15.19■□□□□ 0.02
TRMT13Q9NUP7 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC15.19■□□□□ 0.02
TRMT13Q9NUP7 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
TRMT13Q9NUP7 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRMT13Q9NUP7 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRMT13Q9NUP7 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRMT13Q9NUP7 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRMT13Q9NUP7 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC15.19■□□□□ 0.02
TRMT13Q9NUP7 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC15.19■□□□□ 0.02
TRMT13Q9NUP7 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
TRMT13Q9NUP7 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRMT13Q9NUP7 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
TRMT13Q9NUP7 PLAT-211ENST00000524009 1613 ntTSL 2 BASIC15.19■□□□□ 0.02
TRMT13Q9NUP7 CALML6-201ENST00000307786 1101 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRMT13Q9NUP7 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRMT13Q9NUP7 GH1-203ENST00000351388 685 ntTSL 2 BASIC15.19■□□□□ 0.02
TRMT13Q9NUP7 WFDC5-202ENST00000372789 1018 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRMT13Q9NUP7 KRTAP2-3-201ENST00000391418 875 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
TRMT13Q9NUP7 SNU13-204ENST00000402458 462 ntTSL 3 BASIC15.19■□□□□ 0.02
TRMT13Q9NUP7 AL355482.2-201ENST00000428646 1145 ntTSL 2 BASIC15.19■□□□□ 0.02
TRMT13Q9NUP7 LINC00399-201ENST00000439008 414 ntTSL 2 BASIC15.19■□□□□ 0.02
TRMT13Q9NUP7 KRT19P4-201ENST00000443208 943 ntBASIC15.19■□□□□ 0.02
TRMT13Q9NUP7 C11orf58-207ENST00000525684 575 ntTSL 2 BASIC15.19■□□□□ 0.02
TRMT13Q9NUP7 C11orf58-209ENST00000528634 776 ntTSL 5 BASIC15.19■□□□□ 0.02
TRMT13Q9NUP7 BMF-206ENST00000558774 671 ntTSL 3 BASIC15.19■□□□□ 0.02
TRMT13Q9NUP7 SRP14-208ENST00000560773 468 ntTSL 3 BASIC15.19■□□□□ 0.02
TRMT13Q9NUP7 FAM192A-218ENST00000567439 1086 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
TRMT13Q9NUP7 AC008747.1-201ENST00000592220 442 ntTSL 3 BASIC15.19■□□□□ 0.02
TRMT13Q9NUP7 PRMT1P1-201ENST00000604252 1009 ntBASIC15.19■□□□□ 0.02
TRMT13Q9NUP7 AC026120.2-201ENST00000617239 309 ntBASIC15.19■□□□□ 0.02
TRMT13Q9NUP7 AL139424.3-202ENST00000641619 917 ntBASIC15.19■□□□□ 0.02
TRMT13Q9NUP7 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRMT13Q9NUP7 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
TRMT13Q9NUP7 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms