Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
HLA-CQ95604 AC011477.7-201ENST00000617163 1440 ntBASIC14.25□□□□□ -0.13
HLA-CQ95604 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HLA-CQ95604 KRT8P42-201ENST00000405771 1399 ntBASIC14.25□□□□□ -0.13
HLA-CQ95604 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
HLA-CQ95604 AC069061.4-201ENST00000581294 1347 ntBASIC14.25□□□□□ -0.13
HLA-CQ95604 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HLA-CQ95604 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
HLA-CQ95604 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HLA-CQ95604 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HLA-CQ95604 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC14.25□□□□□ -0.13
HLA-CQ95604 MARS-233ENST00000628866 2583 ntTSL 5 BASIC14.25□□□□□ -0.13
HLA-CQ95604 CRCT1-201ENST00000368790 700 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HLA-CQ95604 AC245128.1-201ENST00000400864 1294 ntTSL 5 BASIC14.25□□□□□ -0.13
HLA-CQ95604 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC14.25□□□□□ -0.13
HLA-CQ95604 DHRSX-IT1-201ENST00000437244 651 ntTSL 5 BASIC14.25□□□□□ -0.13
HLA-CQ95604 HNRNPA1P73-201ENST00000446472 928 ntBASIC14.25□□□□□ -0.13
HLA-CQ95604 TPT1P11-201ENST00000458482 498 ntBASIC14.25□□□□□ -0.13
HLA-CQ95604 CST7-201ENST00000480798 930 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HLA-CQ95604 PDPN-208ENST00000509009 571 ntTSL 4 BASIC14.25□□□□□ -0.13
HLA-CQ95604 FAR1-IT1-201ENST00000525233 368 ntTSL 3 BASIC14.25□□□□□ -0.13
HLA-CQ95604 SCGB1A1-202ENST00000534397 466 ntTSL 3 BASIC14.25□□□□□ -0.13
HLA-CQ95604 ALG10-202ENST00000538927 571 ntTSL 5 BASIC14.25□□□□□ -0.13
HLA-CQ95604 AC078878.2-201ENST00000543451 286 ntTSL 5 BASIC14.25□□□□□ -0.13
HLA-CQ95604 COX14-204ENST00000550654 580 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
HLA-CQ95604 AC078923.1-201ENST00000552856 748 ntTSL 3 BASIC14.25□□□□□ -0.13
HLA-CQ95604 AC133552.4-201ENST00000576103 676 ntBASIC14.25□□□□□ -0.13
HLA-CQ95604 BX510359.7-201ENST00000619819 630 ntBASIC14.25□□□□□ -0.13
HLA-CQ95604 AC005609.1-201ENST00000625195 617 ntTSL 5 BASIC14.25□□□□□ -0.13
HLA-CQ95604 CDIPT-AS1-203ENST00000638164 713 ntBASIC14.25□□□□□ -0.13
HLA-CQ95604 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HLA-CQ95604 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC14.25□□□□□ -0.13
HLA-CQ95604 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HLA-CQ95604 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC14.25□□□□□ -0.13
HLA-CQ95604 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC14.25□□□□□ -0.13
HLA-CQ95604 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HLA-CQ95604 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
HLA-CQ95604 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC14.25□□□□□ -0.13
HLA-CQ95604 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
HLA-CQ95604 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
HLA-CQ95604 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC14.25□□□□□ -0.13
HLA-CQ95604 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
HLA-CQ95604 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
HLA-CQ95604 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HLA-CQ95604 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
HLA-CQ95604 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC14.25□□□□□ -0.13
HLA-CQ95604 CKAP2-202ENST00000378034 1972 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
HLA-CQ95604 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HLA-CQ95604 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HLA-CQ95604 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HLA-CQ95604 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HLA-CQ95604 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HLA-CQ95604 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
HLA-CQ95604 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC14.25□□□□□ -0.13
HLA-CQ95604 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
HLA-CQ95604 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
HLA-CQ95604 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HLA-CQ95604 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC14.24□□□□□ -0.13
HLA-CQ95604 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
HLA-CQ95604 ECI2-202ENST00000380118 1407 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HLA-CQ95604 ALDOA-202ENST00000395240 1447 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
HLA-CQ95604 GOSR2-209ENST00000575949 1444 ntTSL 2 BASIC14.24□□□□□ -0.13
HLA-CQ95604 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC14.24□□□□□ -0.13
HLA-CQ95604 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC14.24□□□□□ -0.13
HLA-CQ95604 FAM167A-AS1-203ENST00000624614 1357 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
HLA-CQ95604 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC14.24□□□□□ -0.13
HLA-CQ95604 TAGLN3-205ENST00000478951 1301 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HLA-CQ95604 AC008038.1-201ENST00000634247 1314 ntBASIC14.24□□□□□ -0.13
HLA-CQ95604 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
HLA-CQ95604 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HLA-CQ95604 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HLA-CQ95604 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
HLA-CQ95604 RNU6-673P-201ENST00000365084 104 ntBASIC14.24□□□□□ -0.13
HLA-CQ95604 AL512328.1-203ENST00000428480 673 ntTSL 5 BASIC14.24□□□□□ -0.13
HLA-CQ95604 ASLP1-201ENST00000428790 637 ntBASIC14.24□□□□□ -0.13
HLA-CQ95604 SDR42E1P3-201ENST00000438345 502 ntBASIC14.24□□□□□ -0.13
HLA-CQ95604 AL137077.1-201ENST00000442115 528 ntBASIC14.24□□□□□ -0.13
HLA-CQ95604 OR52X1P-201ENST00000446117 914 ntBASIC14.24□□□□□ -0.13
HLA-CQ95604 MTHFD2P7-201ENST00000483867 983 ntBASIC14.24□□□□□ -0.13
HLA-CQ95604 RPL29P2-202ENST00000498671 657 ntBASIC14.24□□□□□ -0.13
HLA-CQ95604 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC14.24□□□□□ -0.13
HLA-CQ95604 PDCD2-205ENST00000537445 1114 ntTSL 3 BASIC14.24□□□□□ -0.13
HLA-CQ95604 AC116036.2-201ENST00000607592 462 ntBASIC14.24□□□□□ -0.13
HLA-CQ95604 SDHD-214ENST00000614349 516 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
HLA-CQ95604 AL109924.4-201ENST00000623089 670 ntBASIC14.24□□□□□ -0.13
HLA-CQ95604 AC091905.3-201ENST00000624959 234 ntBASIC14.24□□□□□ -0.13
HLA-CQ95604 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC14.24□□□□□ -0.13
HLA-CQ95604 HLA-DQA1-201ENST00000343139 1591 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
HLA-CQ95604 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
HLA-CQ95604 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
HLA-CQ95604 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
HLA-CQ95604 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
HLA-CQ95604 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
HLA-CQ95604 CWC27-201ENST00000381070 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HLA-CQ95604 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
HLA-CQ95604 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
HLA-CQ95604 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
HLA-CQ95604 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
HLA-CQ95604 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
HLA-CQ95604 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms