Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 CEP126-201ENST00000263468 7039 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
RTN4IP1Q8WWV3 COG5-201ENST00000297135 4060 ntAPPRIS P4 TSL 1 (best) BASIC11.89□□□□□ -0.51
RTN4IP1Q8WWV3 MED16-202ENST00000312090 3229 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
RTN4IP1Q8WWV3 RBP3-201ENST00000584701 4276 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
RTN4IP1Q8WWV3 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
RTN4IP1Q8WWV3 ZNF792-201ENST00000404801 3888 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
RTN4IP1Q8WWV3 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
RTN4IP1Q8WWV3 LRRC8A-203ENST00000372600 4355 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
RTN4IP1Q8WWV3 SLC35F2-203ENST00000525071 3331 ntAPPRIS ALT2 TSL 2 BASIC11.89□□□□□ -0.51
RTN4IP1Q8WWV3 NCSTN-201ENST00000294785 2936 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
RTN4IP1Q8WWV3 CYP2J2-201ENST00000371204 1896 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
RTN4IP1Q8WWV3 AC073869.1-201ENST00000415574 2762 ntBASIC11.89□□□□□ -0.51
RTN4IP1Q8WWV3 AMER1-202ENST00000374869 3688 ntTSL 5 BASIC11.89□□□□□ -0.51
RTN4IP1Q8WWV3 MCPH1-AS1-201ENST00000515608 2147 ntTSL 5 BASIC11.89□□□□□ -0.51
RTN4IP1Q8WWV3 CNTD1-204ENST00000588408 2369 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
RTN4IP1Q8WWV3 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
RTN4IP1Q8WWV3 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
RTN4IP1Q8WWV3 OR2I1P-208ENST00000641137 4948 ntBASIC11.89□□□□□ -0.51
RTN4IP1Q8WWV3 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
RTN4IP1Q8WWV3 ITSN1-208ENST00000399349 5191 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
RTN4IP1Q8WWV3 AL023775.1-201ENST00000454907 1746 ntBASIC11.89□□□□□ -0.51
RTN4IP1Q8WWV3 ADCY4-202ENST00000418030 3353 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
RTN4IP1Q8WWV3 IFT172-202ENST00000359466 2207 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
RTN4IP1Q8WWV3 PTH2R-201ENST00000272847 2713 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
RTN4IP1Q8WWV3 BRD1-201ENST00000216267 4614 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
RTN4IP1Q8WWV3 MCC-201ENST00000302475 8257 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
RTN4IP1Q8WWV3 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC11.88□□□□□ -0.51
RTN4IP1Q8WWV3 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
RTN4IP1Q8WWV3 LCA5-202ENST00000392959 4719 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
RTN4IP1Q8WWV3 WASF3-202ENST00000361042 4823 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
RTN4IP1Q8WWV3 PRDM16-201ENST00000270722 8690 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
RTN4IP1Q8WWV3 ACVR1B-202ENST00000415850 1665 ntTSL 2 BASIC11.88□□□□□ -0.51
RTN4IP1Q8WWV3 MTMR4-204ENST00000579925 5622 ntTSL 5 BASIC11.88□□□□□ -0.51
RTN4IP1Q8WWV3 CDIP1-201ENST00000399599 3009 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
RTN4IP1Q8WWV3 CPT1C-202ENST00000323446 2783 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
RTN4IP1Q8WWV3 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC11.88□□□□□ -0.51
RTN4IP1Q8WWV3 EOGT-202ENST00000383701 4731 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
RTN4IP1Q8WWV3 DSCAML1-203ENST00000527706 6099 ntTSL 5 BASIC11.88□□□□□ -0.51
RTN4IP1Q8WWV3 MEAF6-204ENST00000373075 2147 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
RTN4IP1Q8WWV3 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
RTN4IP1Q8WWV3 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC11.88□□□□□ -0.51
RTN4IP1Q8WWV3 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC11.88□□□□□ -0.51
RTN4IP1Q8WWV3 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
RTN4IP1Q8WWV3 AC079178.1-201ENST00000420915 656 ntBASIC11.88□□□□□ -0.51
RTN4IP1Q8WWV3 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC11.88□□□□□ -0.51
RTN4IP1Q8WWV3 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC11.88□□□□□ -0.51
RTN4IP1Q8WWV3 KRT223P-202ENST00000449164 1292 ntBASIC11.88□□□□□ -0.51
RTN4IP1Q8WWV3 SMARCA4-205ENST00000450717 5506 ntTSL 5 BASIC11.88□□□□□ -0.51
RTN4IP1Q8WWV3 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
RTN4IP1Q8WWV3 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC11.88□□□□□ -0.51
RTN4IP1Q8WWV3 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
RTN4IP1Q8WWV3 IGHVIII-5-2-201ENST00000522505 261 ntBASIC11.88□□□□□ -0.51
RTN4IP1Q8WWV3 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC11.88□□□□□ -0.51
RTN4IP1Q8WWV3 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC11.88□□□□□ -0.51
RTN4IP1Q8WWV3 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC11.88□□□□□ -0.51
RTN4IP1Q8WWV3 COX11-210ENST00000639671 696 ntBASIC11.88□□□□□ -0.51
RTN4IP1Q8WWV3 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC11.88□□□□□ -0.51
RTN4IP1Q8WWV3 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC11.88□□□□□ -0.51
RTN4IP1Q8WWV3 IKZF1-203ENST00000346667 5376 ntTSL 5 BASIC11.88□□□□□ -0.51
RTN4IP1Q8WWV3 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC11.88□□□□□ -0.51
RTN4IP1Q8WWV3 EWSAT1-201ENST00000415504 2214 ntTSL 2 BASIC11.88□□□□□ -0.51
RTN4IP1Q8WWV3 UNC13D-201ENST00000207549 4393 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
RTN4IP1Q8WWV3 DDX54-201ENST00000306014 4377 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
RTN4IP1Q8WWV3 NTN4-203ENST00000538383 1971 ntTSL 2 BASIC11.88□□□□□ -0.51
RTN4IP1Q8WWV3 PPP1R8-202ENST00000311772 2344 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
RTN4IP1Q8WWV3 SLC38A1-204ENST00000546893 2332 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
RTN4IP1Q8WWV3 ICOSLG-203ENST00000400379 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
RTN4IP1Q8WWV3 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
RTN4IP1Q8WWV3 PJA1-203ENST00000374583 2692 ntAPPRIS P4 BASIC11.88□□□□□ -0.51
RTN4IP1Q8WWV3 NSD2-203ENST00000382888 2666 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
RTN4IP1Q8WWV3 PPP3CA-202ENST00000394853 3604 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
RTN4IP1Q8WWV3 IFT81-202ENST00000361948 3048 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
RTN4IP1Q8WWV3 TEX26-AS1-205ENST00000585870 2053 ntTSL 2 BASIC11.88□□□□□ -0.51
RTN4IP1Q8WWV3 SAP30BP-202ENST00000355423 2439 ntTSL 2 BASIC11.88□□□□□ -0.51
RTN4IP1Q8WWV3 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC11.88□□□□□ -0.51
RTN4IP1Q8WWV3 C21orf59-203ENST00000382549 2503 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
RTN4IP1Q8WWV3 PTCHD3-201ENST00000438700 2529 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
RTN4IP1Q8WWV3 SYNGAP1-208ENST00000629380 9862 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
RTN4IP1Q8WWV3 NPAS4-201ENST00000311034 3303 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
RTN4IP1Q8WWV3 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
RTN4IP1Q8WWV3 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
RTN4IP1Q8WWV3 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
RTN4IP1Q8WWV3 ITPRIPL1-204ENST00000439118 1946 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
RTN4IP1Q8WWV3 DLGAP1-203ENST00000400147 5258 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
RTN4IP1Q8WWV3 DLGAP1-206ENST00000400155 5257 ntTSL 2 BASIC11.88□□□□□ -0.51
RTN4IP1Q8WWV3 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
RTN4IP1Q8WWV3 DUOXA1-205ENST00000558422 1678 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
RTN4IP1Q8WWV3 SCN8A-202ENST00000355133 5820 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
RTN4IP1Q8WWV3 PDHA1-212ENST00000540249 3277 ntTSL 2 BASIC11.87□□□□□ -0.51
RTN4IP1Q8WWV3 ZCCHC8-207ENST00000543897 5663 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
RTN4IP1Q8WWV3 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC11.87□□□□□ -0.51
RTN4IP1Q8WWV3 WDFY2-203ENST00000612477 6932 ntTSL 2 BASIC11.87□□□□□ -0.51
RTN4IP1Q8WWV3 TP53INP2-202ENST00000374810 4184 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
RTN4IP1Q8WWV3 INSC-207ENST00000528567 2237 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
RTN4IP1Q8WWV3 NFATC1-203ENST00000329101 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
RTN4IP1Q8WWV3 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
RTN4IP1Q8WWV3 PHB-210ENST00000511832 1509 ntTSL 2 BASIC11.87□□□□□ -0.51
RTN4IP1Q8WWV3 SLC45A1-201ENST00000289877 2401 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
RTN4IP1Q8WWV3 RGL4-202ENST00000401461 2420 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
RTN4IP1Q8WWV3 STRIP2-201ENST00000249344 5115 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 83.2 ms