Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC13□□□□□ -0.33
H3F3CQ6NXT2 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
H3F3CQ6NXT2 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
H3F3CQ6NXT2 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
H3F3CQ6NXT2 UPK3BL1-201ENST00000340457 1342 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
H3F3CQ6NXT2 BIN3-202ENST00000399977 1340 ntTSL 2 BASIC13□□□□□ -0.33
H3F3CQ6NXT2 PIGL-201ENST00000225609 1137 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
H3F3CQ6NXT2 OR2V1-201ENST00000329365 948 ntAPPRIS P1 BASIC13□□□□□ -0.33
H3F3CQ6NXT2 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
H3F3CQ6NXT2 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC13□□□□□ -0.33
H3F3CQ6NXT2 LY6G6E-227ENST00000409239 776 ntAPPRIS ALT2 TSL 4 BASIC13□□□□□ -0.33
H3F3CQ6NXT2 FLJ37035-201ENST00000419400 446 ntTSL 3 BASIC13□□□□□ -0.33
H3F3CQ6NXT2 GRPEL2P1-201ENST00000453145 339 ntBASIC13□□□□□ -0.33
H3F3CQ6NXT2 IGHV3-37-201ENST00000518544 340 ntBASIC13□□□□□ -0.33
H3F3CQ6NXT2 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC13□□□□□ -0.33
H3F3CQ6NXT2 AP003398.1-201ENST00000531124 318 ntBASIC13□□□□□ -0.33
H3F3CQ6NXT2 CR383656.3-201ENST00000551315 183 ntBASIC13□□□□□ -0.33
H3F3CQ6NXT2 AC011921.1-201ENST00000559739 557 ntTSL 4 BASIC13□□□□□ -0.33
H3F3CQ6NXT2 AC068867.1-201ENST00000559855 150 ntBASIC13□□□□□ -0.33
H3F3CQ6NXT2 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC13□□□□□ -0.33
H3F3CQ6NXT2 SPINT2-204ENST00000587090 1246 ntAPPRIS ALT2 TSL 3 BASIC13□□□□□ -0.33
H3F3CQ6NXT2 HIST1H2BE-201ENST00000614097 497 ntAPPRIS P1 BASIC13□□□□□ -0.33
H3F3CQ6NXT2 AC105137.3-201ENST00000617588 984 ntBASIC13□□□□□ -0.33
H3F3CQ6NXT2 AC073911.3-201ENST00000624401 631 ntBASIC13□□□□□ -0.33
H3F3CQ6NXT2 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC13□□□□□ -0.33
H3F3CQ6NXT2 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
H3F3CQ6NXT2 Z82170.1-201ENST00000625081 3192 ntBASIC13□□□□□ -0.33
H3F3CQ6NXT2 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
H3F3CQ6NXT2 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC13□□□□□ -0.33
H3F3CQ6NXT2 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
H3F3CQ6NXT2 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
H3F3CQ6NXT2 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
H3F3CQ6NXT2 LIPA-205ENST00000456827 2527 ntTSL 3 BASIC13□□□□□ -0.33
H3F3CQ6NXT2 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC13□□□□□ -0.33
H3F3CQ6NXT2 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
H3F3CQ6NXT2 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC13□□□□□ -0.33
H3F3CQ6NXT2 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC13□□□□□ -0.33
H3F3CQ6NXT2 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
H3F3CQ6NXT2 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC13□□□□□ -0.33
H3F3CQ6NXT2 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC13□□□□□ -0.33
H3F3CQ6NXT2 GUCY1B2-205ENST00000532104 1912 ntTSL 2 BASIC13□□□□□ -0.33
H3F3CQ6NXT2 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
H3F3CQ6NXT2 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
H3F3CQ6NXT2 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
H3F3CQ6NXT2 ZBTB47-201ENST00000232974 3781 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
H3F3CQ6NXT2 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
H3F3CQ6NXT2 SLC25A20-202ENST00000430379 1576 ntTSL 3 BASIC12.99□□□□□ -0.33
H3F3CQ6NXT2 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
H3F3CQ6NXT2 AC093668.2-201ENST00000481893 3569 ntTSL 2 BASIC12.99□□□□□ -0.33
H3F3CQ6NXT2 AC105052.1-201ENST00000519541 3569 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
H3F3CQ6NXT2 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
H3F3CQ6NXT2 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
H3F3CQ6NXT2 AC004554.1-201ENST00000422830 1468 ntBASIC12.99□□□□□ -0.33
H3F3CQ6NXT2 SEC13-202ENST00000350697 1425 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
H3F3CQ6NXT2 IL1F10-202ENST00000393197 1366 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
H3F3CQ6NXT2 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC12.99□□□□□ -0.33
H3F3CQ6NXT2 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
H3F3CQ6NXT2 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
H3F3CQ6NXT2 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
H3F3CQ6NXT2 BGLAP-201ENST00000368272 732 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
H3F3CQ6NXT2 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
H3F3CQ6NXT2 AC097059.1-201ENST00000413103 885 ntTSL 5 BASIC12.99□□□□□ -0.33
H3F3CQ6NXT2 NSUN5P1-203ENST00000422386 972 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
H3F3CQ6NXT2 RPS23-204ENST00000507980 836 ntTSL 2 BASIC12.99□□□□□ -0.33
H3F3CQ6NXT2 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC12.99□□□□□ -0.33
H3F3CQ6NXT2 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC12.99□□□□□ -0.33
H3F3CQ6NXT2 C12orf73-210ENST00000552940 685 ntTSL 2 BASIC12.99□□□□□ -0.33
H3F3CQ6NXT2 TXNDC17-208ENST00000574838 746 ntTSL 3 BASIC12.99□□□□□ -0.33
H3F3CQ6NXT2 MIR4265-201ENST00000582152 99 ntBASIC12.99□□□□□ -0.33
H3F3CQ6NXT2 MIR4750-201ENST00000584564 56 ntBASIC12.99□□□□□ -0.33
H3F3CQ6NXT2 AP005264.5-201ENST00000590066 467 ntBASIC12.99□□□□□ -0.33
H3F3CQ6NXT2 AC008758.6-201ENST00000598753 588 ntAPPRIS P1 TSL 4 BASIC12.99□□□□□ -0.33
H3F3CQ6NXT2 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
H3F3CQ6NXT2 TP53-221ENST00000615910 1149 ntTSL 5 BASIC12.99□□□□□ -0.33
H3F3CQ6NXT2 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
H3F3CQ6NXT2 AL161773.1-201ENST00000624845 863 ntBASIC12.99□□□□□ -0.33
H3F3CQ6NXT2 SLC12A5-219ENST00000628272 401 ntTSL 3 BASIC12.99□□□□□ -0.33
H3F3CQ6NXT2 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
H3F3CQ6NXT2 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
H3F3CQ6NXT2 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
H3F3CQ6NXT2 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
H3F3CQ6NXT2 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC12.99□□□□□ -0.33
H3F3CQ6NXT2 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
H3F3CQ6NXT2 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
H3F3CQ6NXT2 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
H3F3CQ6NXT2 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
H3F3CQ6NXT2 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
H3F3CQ6NXT2 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC12.99□□□□□ -0.33
H3F3CQ6NXT2 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC12.98□□□□□ -0.33
H3F3CQ6NXT2 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
H3F3CQ6NXT2 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
H3F3CQ6NXT2 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
H3F3CQ6NXT2 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
H3F3CQ6NXT2 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC12.98□□□□□ -0.33
H3F3CQ6NXT2 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC12.98□□□□□ -0.33
H3F3CQ6NXT2 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
H3F3CQ6NXT2 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
H3F3CQ6NXT2 PPP1R1B-202ENST00000394265 1419 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
H3F3CQ6NXT2 INTS4P1-203ENST00000641008 3683 ntBASIC12.98□□□□□ -0.33
H3F3CQ6NXT2 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 66.2 ms