Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 Z98885.3-201ENST00000624882 1757 ntBASIC13.23□□□□□ -0.29
LPCAT4Q643R3 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
LPCAT4Q643R3 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LPCAT4Q643R3 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LPCAT4Q643R3 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
LPCAT4Q643R3 SSR4P1-201ENST00000415143 412 ntBASIC13.23□□□□□ -0.29
LPCAT4Q643R3 BX842568.4-201ENST00000421222 227 ntBASIC13.23□□□□□ -0.29
LPCAT4Q643R3 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC13.23□□□□□ -0.29
LPCAT4Q643R3 AP000347.1-202ENST00000435868 847 ntBASIC13.23□□□□□ -0.29
LPCAT4Q643R3 FTH1-202ENST00000526640 786 ntTSL 2 BASIC13.23□□□□□ -0.29
LPCAT4Q643R3 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC13.23□□□□□ -0.29
LPCAT4Q643R3 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC13.23□□□□□ -0.29
LPCAT4Q643R3 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC13.23□□□□□ -0.29
LPCAT4Q643R3 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC13.23□□□□□ -0.29
LPCAT4Q643R3 BRI3BPP1-201ENST00000594224 787 ntBASIC13.23□□□□□ -0.29
LPCAT4Q643R3 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
LPCAT4Q643R3 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC13.23□□□□□ -0.29
LPCAT4Q643R3 ADAMTSL4-AS1-203ENST00000617352 1036 ntTSL 5 BASIC13.23□□□□□ -0.29
LPCAT4Q643R3 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
LPCAT4Q643R3 TMEM246-202ENST00000374848 4244 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LPCAT4Q643R3 SLC26A6-204ENST00000383733 2545 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
LPCAT4Q643R3 FERMT2-201ENST00000341590 3338 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LPCAT4Q643R3 TBC1D3P2-203ENST00000581291 2088 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
LPCAT4Q643R3 AC091181.1-201ENST00000623762 2098 ntBASIC13.23□□□□□ -0.29
LPCAT4Q643R3 ATP1A1-201ENST00000295598 3654 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
LPCAT4Q643R3 CACNA1G-226ENST00000513689 6879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
LPCAT4Q643R3 CACNA1G-228ENST00000514079 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
LPCAT4Q643R3 CACNA1G-231ENST00000515165 6870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
LPCAT4Q643R3 EFR3B-205ENST00000405108 2432 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
LPCAT4Q643R3 NUF2-201ENST00000271452 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LPCAT4Q643R3 FBF1-210ENST00000592193 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
LPCAT4Q643R3 PIGG-205ENST00000503111 2629 ntTSL 2 BASIC13.23□□□□□ -0.29
LPCAT4Q643R3 RHOH-222ENST00000617441 1872 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
LPCAT4Q643R3 OSTM1-AS1-202ENST00000441184 3334 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
LPCAT4Q643R3 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
LPCAT4Q643R3 CACNA1C-214ENST00000399634 7590 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
LPCAT4Q643R3 CACNA1C-222ENST00000406454 7590 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
LPCAT4Q643R3 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LPCAT4Q643R3 UNC93A-201ENST00000230256 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LPCAT4Q643R3 WDR47-204ENST00000369965 4240 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
LPCAT4Q643R3 PCDHB4-201ENST00000194152 3825 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
LPCAT4Q643R3 PTK7-204ENST00000349241 3801 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
LPCAT4Q643R3 DFFB-201ENST00000338895 3105 ntTSL 2 BASIC13.22□□□□□ -0.29
LPCAT4Q643R3 CC2D1A-208ENST00000589606 3117 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LPCAT4Q643R3 MLX-203ENST00000435881 2428 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LPCAT4Q643R3 FOXN3-219ENST00000615335 2421 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
LPCAT4Q643R3 FAM156A-208ENST00000615092 2098 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
LPCAT4Q643R3 ITSN1-208ENST00000399349 5191 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
LPCAT4Q643R3 ERAP1-201ENST00000296754 5495 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
LPCAT4Q643R3 DIDO1-202ENST00000354665 2707 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
LPCAT4Q643R3 EPN3-201ENST00000268933 4071 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
LPCAT4Q643R3 AL353608.3-202ENST00000429953 4384 ntTSL 5 BASIC13.22□□□□□ -0.29
LPCAT4Q643R3 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC13.22□□□□□ -0.29
LPCAT4Q643R3 ATP13A2-203ENST00000452699 3981 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
LPCAT4Q643R3 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
LPCAT4Q643R3 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
LPCAT4Q643R3 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LPCAT4Q643R3 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
LPCAT4Q643R3 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
LPCAT4Q643R3 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
LPCAT4Q643R3 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
LPCAT4Q643R3 HMGA1P1-201ENST00000415560 1062 ntBASIC13.22□□□□□ -0.29
LPCAT4Q643R3 AC211486.1-202ENST00000416371 468 ntBASIC13.22□□□□□ -0.29
LPCAT4Q643R3 AC112482.1-201ENST00000492080 688 ntBASIC13.22□□□□□ -0.29
LPCAT4Q643R3 AC211476.1-201ENST00000503899 468 ntBASIC13.22□□□□□ -0.29
LPCAT4Q643R3 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC13.22□□□□□ -0.29
LPCAT4Q643R3 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LPCAT4Q643R3 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC13.22□□□□□ -0.29
LPCAT4Q643R3 AL136295.3-201ENST00000558325 850 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
LPCAT4Q643R3 MPI-209ENST00000564003 1195 ntTSL 2 BASIC13.22□□□□□ -0.29
LPCAT4Q643R3 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC13.22□□□□□ -0.29
LPCAT4Q643R3 PAQR3-209ENST00000512733 9811 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LPCAT4Q643R3 SLITRK3-201ENST00000241274 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LPCAT4Q643R3 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
LPCAT4Q643R3 USP49-203ENST00000394253 9034 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
LPCAT4Q643R3 GYG2-204ENST00000381163 3393 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
LPCAT4Q643R3 UBP1-204ENST00000447368 3669 ntAPPRIS ALT1 TSL 2 BASIC13.22□□□□□ -0.29
LPCAT4Q643R3 AC098934.1-201ENST00000443294 1835 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
LPCAT4Q643R3 OVOL1-201ENST00000335987 3034 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LPCAT4Q643R3 UGT3A1-201ENST00000274278 5122 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LPCAT4Q643R3 MAOA-204ENST00000542639 5438 ntTSL 2 BASIC13.22□□□□□ -0.29
LPCAT4Q643R3 TP53INP1-202ENST00000448464 5631 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
LPCAT4Q643R3 PSMD12-201ENST00000356126 4406 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LPCAT4Q643R3 BTBD7P1-201ENST00000447253 1453 ntBASIC13.22□□□□□ -0.29
LPCAT4Q643R3 DZIP1L-201ENST00000327532 3493 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
LPCAT4Q643R3 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LPCAT4Q643R3 BRWD1-201ENST00000333229 10141 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LPCAT4Q643R3 MDH2-204ENST00000443006 2020 ntTSL 2 BASIC13.22□□□□□ -0.29
LPCAT4Q643R3 FAM214B-204ENST00000378566 2566 ntTSL 2 BASIC13.22□□□□□ -0.29
LPCAT4Q643R3 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
LPCAT4Q643R3 CCDC138-203ENST00000412964 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
LPCAT4Q643R3 TMX1-201ENST00000457354 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LPCAT4Q643R3 OR2V2-202ENST00000641492 4777 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
LPCAT4Q643R3 TBC1D22A-203ENST00000380995 3934 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
LPCAT4Q643R3 DDX19B-202ENST00000355992 1692 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
LPCAT4Q643R3 SVOPL-203ENST00000421622 1653 ntTSL 5 BASIC13.21□□□□□ -0.29
LPCAT4Q643R3 MGRN1-211ENST00000588994 1665 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
LPCAT4Q643R3 CICP9-201ENST00000444451 1913 ntBASIC13.21□□□□□ -0.29
LPCAT4Q643R3 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
LPCAT4Q643R3 LGALS3BP-201ENST00000262776 2405 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms