Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 PHB-210ENST00000511832 1509 ntTSL 2 BASIC15.27■□□□□ 0.03
CASP4P49662 MSH2-206ENST00000543555 3024 ntTSL 2 BASIC15.27■□□□□ 0.03
CASP4P49662 GOLGA8IP-201ENST00000340249 1899 ntTSL 2 BASIC15.27■□□□□ 0.03
CASP4P49662 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CASP4P49662 AC004554.1-201ENST00000422830 1468 ntBASIC15.27■□□□□ 0.03
CASP4P49662 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC15.27■□□□□ 0.03
CASP4P49662 CRISPLD2-209ENST00000567845 2178 ntAPPRIS ALT1 TSL 5 BASIC15.26■□□□□ 0.03
CASP4P49662 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CASP4P49662 NUP62CL-201ENST00000372466 1755 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CASP4P49662 HPSE2-206ENST00000628193 1760 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CASP4P49662 FES-201ENST00000328850 2829 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CASP4P49662 GDAP2-201ENST00000369442 2436 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CASP4P49662 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CASP4P49662 MARK2P16-201ENST00000605714 1723 ntBASIC15.26■□□□□ 0.03
CASP4P49662 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC15.26■□□□□ 0.03
CASP4P49662 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC15.26■□□□□ 0.03
CASP4P49662 DCAF8-201ENST00000326837 3972 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
CASP4P49662 KRT18P9-201ENST00000604826 1300 ntBASIC15.26■□□□□ 0.03
CASP4P49662 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CASP4P49662 HTR4-203ENST00000377888 2962 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CASP4P49662 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CASP4P49662 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC15.26■□□□□ 0.03
CASP4P49662 NCF4-202ENST00000397147 1641 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CASP4P49662 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CASP4P49662 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
CASP4P49662 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC15.26■□□□□ 0.03
CASP4P49662 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CASP4P49662 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CASP4P49662 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC15.26■□□□□ 0.03
CASP4P49662 DNAJB1P1-201ENST00000429417 1024 ntBASIC15.26■□□□□ 0.03
CASP4P49662 RPL8P2-201ENST00000430538 502 ntBASIC15.26■□□□□ 0.03
CASP4P49662 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC15.26■□□□□ 0.03
CASP4P49662 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC15.26■□□□□ 0.03
CASP4P49662 RN7SL258P-201ENST00000478664 300 ntBASIC15.26■□□□□ 0.03
CASP4P49662 CD81-209ENST00000492627 886 ntTSL 3 BASIC15.26■□□□□ 0.03
CASP4P49662 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC15.26■□□□□ 0.03
CASP4P49662 AC114947.1-202ENST00000514136 344 ntBASIC15.26■□□□□ 0.03
CASP4P49662 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC15.26■□□□□ 0.03
CASP4P49662 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CASP4P49662 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
CASP4P49662 CRADD-205ENST00000548483 1056 ntTSL 2 BASIC15.26■□□□□ 0.03
CASP4P49662 FGFR3P5-201ENST00000564496 886 ntBASIC15.26■□□□□ 0.03
CASP4P49662 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC15.26■□□□□ 0.03
CASP4P49662 MIR3677-201ENST00000578964 60 ntBASIC15.26■□□□□ 0.03
CASP4P49662 AC012044.1-201ENST00000603431 297 ntBASIC15.26■□□□□ 0.03
CASP4P49662 AL353770.1-201ENST00000614915 403 ntBASIC15.26■□□□□ 0.03
CASP4P49662 AC015967.2-201ENST00000624092 234 ntBASIC15.26■□□□□ 0.03
CASP4P49662 AC006435.4-201ENST00000625037 234 ntBASIC15.26■□□□□ 0.03
CASP4P49662 AL356737.1-201ENST00000634391 234 ntBASIC15.26■□□□□ 0.03
CASP4P49662 C1orf232-202ENST00000635463 466 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
CASP4P49662 AL139424.3-202ENST00000641619 917 ntBASIC15.26■□□□□ 0.03
CASP4P49662 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
CASP4P49662 GGA1-201ENST00000325180 2528 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CASP4P49662 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC15.26■□□□□ 0.03
CASP4P49662 CACNA1C-231ENST00000616390 2833 ntTSL 2 BASIC15.26■□□□□ 0.03
CASP4P49662 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CASP4P49662 MEX3B-202ENST00000558133 4333 ntBASIC15.26■□□□□ 0.03
CASP4P49662 WASHC1-201ENST00000442898 1827 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
CASP4P49662 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CASP4P49662 CPEB1-213ENST00000617462 2068 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CASP4P49662 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CASP4P49662 Z98885.3-201ENST00000624882 1757 ntBASIC15.26■□□□□ 0.03
CASP4P49662 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CASP4P49662 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
CASP4P49662 ALG11-204ENST00000616513 1983 ntTSL 2 BASIC15.25■□□□□ 0.03
CASP4P49662 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CASP4P49662 IFT172-202ENST00000359466 2207 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CASP4P49662 ERAL1-201ENST00000254928 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CASP4P49662 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CASP4P49662 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC15.25■□□□□ 0.03
CASP4P49662 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC15.25■□□□□ 0.03
CASP4P49662 GDPD5-215ENST00000533805 2424 ntTSL 2 BASIC15.25■□□□□ 0.03
CASP4P49662 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CASP4P49662 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC15.25■□□□□ 0.03
CASP4P49662 AC020763.3-201ENST00000625095 2904 ntBASIC15.25■□□□□ 0.03
CASP4P49662 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CASP4P49662 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CASP4P49662 TBC1D27-202ENST00000424239 1573 ntBASIC15.25■□□□□ 0.03
CASP4P49662 AC009474.1-201ENST00000455096 1565 ntBASIC15.25■□□□□ 0.03
CASP4P49662 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CASP4P49662 PGAP2-203ENST00000396986 1837 ntTSL 2 BASIC15.25■□□□□ 0.03
CASP4P49662 AC107918.4-201ENST00000641966 3141 ntBASIC15.25■□□□□ 0.03
CASP4P49662 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC15.25■□□□□ 0.03
CASP4P49662 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CASP4P49662 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CASP4P49662 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CASP4P49662 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CASP4P49662 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CASP4P49662 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
CASP4P49662 AL583805.1-201ENST00000391389 531 ntBASIC15.25■□□□□ 0.03
CASP4P49662 AL589935.1-203ENST00000412751 465 ntTSL 3 BASIC15.25■□□□□ 0.03
CASP4P49662 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC15.25■□□□□ 0.03
CASP4P49662 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CASP4P49662 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC15.25■□□□□ 0.03
CASP4P49662 RN7SL67P-201ENST00000492147 296 ntBASIC15.25■□□□□ 0.03
CASP4P49662 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CASP4P49662 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CASP4P49662 AC011921.1-201ENST00000559739 557 ntTSL 4 BASIC15.25■□□□□ 0.03
CASP4P49662 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC15.25■□□□□ 0.03
CASP4P49662 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 76.4 ms