Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC14.62□□□□□ -0.07
MMP13P45452 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
MMP13P45452 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
MMP13P45452 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC14.62□□□□□ -0.07
MMP13P45452 PAM16-211ENST00000575848 518 ntTSL 3 BASIC14.62□□□□□ -0.07
MMP13P45452 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
MMP13P45452 AC020914.3-201ENST00000594712 304 ntBASIC14.62□□□□□ -0.07
MMP13P45452 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
MMP13P45452 AC026740.1-201ENST00000607068 791 ntBASIC14.62□□□□□ -0.07
MMP13P45452 TBC1D8-AS1-201ENST00000610202 2478 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
MMP13P45452 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC14.62□□□□□ -0.07
MMP13P45452 MIR6799-201ENST00000620297 69 ntBASIC14.62□□□□□ -0.07
MMP13P45452 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC14.62□□□□□ -0.07
MMP13P45452 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
MMP13P45452 AL121827.1-201ENST00000370257 3264 ntTSL 2 BASIC14.62□□□□□ -0.07
MMP13P45452 SH2D3C-201ENST00000314830 3124 ntAPPRIS P4 TSL 1 (best) BASIC14.62□□□□□ -0.07
MMP13P45452 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC14.62□□□□□ -0.07
MMP13P45452 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
MMP13P45452 OS9-201ENST00000257966 2505 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
MMP13P45452 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
MMP13P45452 IFT172-202ENST00000359466 2207 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
MMP13P45452 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
MMP13P45452 ZNF274-210ENST00000610905 2559 ntAPPRIS P4 TSL 5 BASIC14.62□□□□□ -0.07
MMP13P45452 MARK2-205ENST00000408948 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
MMP13P45452 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
MMP13P45452 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC14.62□□□□□ -0.07
MMP13P45452 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
MMP13P45452 IFT81-201ENST00000242591 3108 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
MMP13P45452 SGMS1-203ENST00000429490 3634 ntTSL 5 BASIC14.61□□□□□ -0.07
MMP13P45452 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC14.61□□□□□ -0.07
MMP13P45452 KLHL13-209ENST00000545703 3322 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
MMP13P45452 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
MMP13P45452 NF1-204ENST00000431387 2889 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
MMP13P45452 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC14.61□□□□□ -0.07
MMP13P45452 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
MMP13P45452 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
MMP13P45452 SLC7A8-205ENST00000453702 1752 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
MMP13P45452 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
MMP13P45452 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC14.61□□□□□ -0.07
MMP13P45452 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
MMP13P45452 RAB37-204ENST00000392613 2617 ntAPPRIS ALT1 TSL 2 BASIC14.61□□□□□ -0.07
MMP13P45452 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
MMP13P45452 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC14.61□□□□□ -0.07
MMP13P45452 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
MMP13P45452 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
MMP13P45452 CRCP-204ENST00000398684 492 ntTSL 2 BASIC14.61□□□□□ -0.07
MMP13P45452 MIR1247-201ENST00000408206 136 ntBASIC14.61□□□□□ -0.07
MMP13P45452 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
MMP13P45452 AC016700.1-201ENST00000429424 312 ntBASIC14.61□□□□□ -0.07
MMP13P45452 AK2P2-201ENST00000439142 405 ntBASIC14.61□□□□□ -0.07
MMP13P45452 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC14.61□□□□□ -0.07
MMP13P45452 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
MMP13P45452 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
MMP13P45452 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC14.61□□□□□ -0.07
MMP13P45452 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC14.61□□□□□ -0.07
MMP13P45452 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC14.61□□□□□ -0.07
MMP13P45452 FURIN-206ENST00000610579 4191 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
MMP13P45452 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
MMP13P45452 PDE9A-202ENST00000328862 1956 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
MMP13P45452 DAB2IP-202ENST00000309989 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
MMP13P45452 TRIM4-203ENST00000355947 3383 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
MMP13P45452 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
MMP13P45452 CXorf40A-212ENST00000514208 1840 ntAPPRIS ALT1 TSL 5 BASIC14.61□□□□□ -0.07
MMP13P45452 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
MMP13P45452 FAM201A-201ENST00000377680 3437 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
MMP13P45452 TOLLIP-203ENST00000525159 3429 ntTSL 2 BASIC14.61□□□□□ -0.07
MMP13P45452 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
MMP13P45452 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC14.61□□□□□ -0.07
MMP13P45452 NUTM2E-202ENST00000602967 3623 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
MMP13P45452 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
MMP13P45452 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
MMP13P45452 PRPSAP1-206ENST00000446526 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
MMP13P45452 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
MMP13P45452 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
MMP13P45452 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
MMP13P45452 AP003969.2-201ENST00000623739 2275 ntBASIC14.61□□□□□ -0.07
MMP13P45452 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
MMP13P45452 AC016245.1-201ENST00000570335 3204 ntTSL 2 BASIC14.6□□□□□ -0.07
MMP13P45452 BAK1-202ENST00000374467 2136 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
MMP13P45452 ZMYND10-201ENST00000231749 2896 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
MMP13P45452 OPN4-201ENST00000241891 2308 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
MMP13P45452 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC14.6□□□□□ -0.07
MMP13P45452 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
MMP13P45452 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
MMP13P45452 MAP3K12-203ENST00000547035 2944 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
MMP13P45452 VAMP2-201ENST00000316509 2153 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
MMP13P45452 AC060814.4-201ENST00000594169 2163 ntBASIC14.6□□□□□ -0.07
MMP13P45452 C12orf43-202ENST00000445832 2397 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
MMP13P45452 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
MMP13P45452 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC14.6□□□□□ -0.07
MMP13P45452 ZC3H18-201ENST00000301011 3729 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
MMP13P45452 KCTD9-201ENST00000221200 3401 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
MMP13P45452 RN7SKP214-201ENST00000364208 315 ntBASIC14.6□□□□□ -0.07
MMP13P45452 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
MMP13P45452 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
MMP13P45452 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
MMP13P45452 HNRNPA1P41-201ENST00000397777 928 ntBASIC14.6□□□□□ -0.07
MMP13P45452 TSPY25P-201ENST00000429463 745 ntBASIC14.6□□□□□ -0.07
MMP13P45452 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC14.6□□□□□ -0.07
MMP13P45452 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC14.6□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms