Protein–RNA interactions for Protein: P29279

CTGF, Connective tissue growth factor, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTGFP29279 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.05
CTGFP29279 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
CTGFP29279 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
CTGFP29279 AC241585.2-201ENST00000578899 2307 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
CTGFP29279 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
CTGFP29279 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.05
CTGFP29279 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CTGFP29279 AL356753.1-201ENST00000427035 2018 ntTSL 2 BASIC15.33■□□□□ 0.04
CTGFP29279 RCL1-206ENST00000442869 1644 ntTSL 3 BASIC15.33■□□□□ 0.04
CTGFP29279 COPS5-203ENST00000517736 1621 ntTSL 5 BASIC15.33■□□□□ 0.04
CTGFP29279 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
CTGFP29279 TPO-203ENST00000346956 2923 ntTSL 5 BASIC15.33■□□□□ 0.04
CTGFP29279 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC15.33■□□□□ 0.04
CTGFP29279 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CTGFP29279 MYL3-201ENST00000292327 924 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CTGFP29279 PIGL-202ENST00000395844 1257 ntTSL 5 BASIC15.33■□□□□ 0.04
CTGFP29279 PPIL3-205ENST00000409449 756 ntTSL 5 BASIC15.33■□□□□ 0.04
CTGFP29279 PRSS45-201ENST00000442359 687 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CTGFP29279 HTATIP2-203ENST00000443524 967 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
CTGFP29279 RN7SL677P-201ENST00000466970 319 ntBASIC15.33■□□□□ 0.04
CTGFP29279 RAB6B-205ENST00000486858 880 ntTSL 2 BASIC15.33■□□□□ 0.04
CTGFP29279 TMEM154-202ENST00000504064 878 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
CTGFP29279 PDPN-208ENST00000509009 571 ntTSL 4 BASIC15.33■□□□□ 0.04
CTGFP29279 PTPN20-229ENST00000513756 640 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CTGFP29279 SCGB1A1-202ENST00000534397 466 ntTSL 3 BASIC15.33■□□□□ 0.04
CTGFP29279 LINC00677-201ENST00000558224 486 ntTSL 3 BASIC15.33■□□□□ 0.04
CTGFP29279 NSRP1-213ENST00000584423 482 ntTSL 2 BASIC15.33■□□□□ 0.04
CTGFP29279 C17orf62-234ENST00000584503 584 ntTSL 2 BASIC15.33■□□□□ 0.04
CTGFP29279 AC007998.2-201ENST00000589258 455 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.04
CTGFP29279 AC010319.4-201ENST00000593957 691 ntTSL 3 BASIC15.33■□□□□ 0.04
CTGFP29279 BLVRB-202ENST00000595483 649 ntTSL 2 BASIC15.33■□□□□ 0.04
CTGFP29279 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
CTGFP29279 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CTGFP29279 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CTGFP29279 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC15.33■□□□□ 0.04
CTGFP29279 YWHAE-201ENST00000264335 2211 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CTGFP29279 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CTGFP29279 CICP24-201ENST00000605464 2705 ntBASIC15.33■□□□□ 0.04
CTGFP29279 ASMT-203ENST00000381241 1388 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CTGFP29279 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CTGFP29279 CCDC159-209ENST00000588790 1408 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
CTGFP29279 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CTGFP29279 AC011239.2-201ENST00000624820 1489 ntBASIC15.33■□□□□ 0.04
CTGFP29279 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
CTGFP29279 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC15.33■□□□□ 0.04
CTGFP29279 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CTGFP29279 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC15.32■□□□□ 0.04
CTGFP29279 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC15.32■□□□□ 0.04
CTGFP29279 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CTGFP29279 AL513497.1-201ENST00000624273 2083 ntBASIC15.32■□□□□ 0.04
CTGFP29279 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
CTGFP29279 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CTGFP29279 TRIML2-207ENST00000512729 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CTGFP29279 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
CTGFP29279 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CTGFP29279 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CTGFP29279 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC15.32■□□□□ 0.04
CTGFP29279 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CTGFP29279 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
CTGFP29279 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC15.32■□□□□ 0.04
CTGFP29279 SYT4-205ENST00000590752 1765 ntTSL 2 BASIC15.32■□□□□ 0.04
CTGFP29279 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
CTGFP29279 RUSC1-AS1-202ENST00000446880 1836 ntTSL 2 BASIC15.32■□□□□ 0.04
CTGFP29279 CHCHD7-218ENST00000523975 1805 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CTGFP29279 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CTGFP29279 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CTGFP29279 TMEM182-201ENST00000409173 3198 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CTGFP29279 CA6-201ENST00000377436 942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CTGFP29279 CA6-202ENST00000377442 747 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CTGFP29279 MIR766-201ENST00000390223 111 ntBASIC15.32■□□□□ 0.04
CTGFP29279 AC245128.1-201ENST00000400864 1294 ntTSL 5 BASIC15.32■□□□□ 0.04
CTGFP29279 AL356653.1-201ENST00000402743 360 ntBASIC15.32■□□□□ 0.04
CTGFP29279 AP000343.1-201ENST00000440602 385 ntBASIC15.32■□□□□ 0.04
CTGFP29279 AC008267.3-201ENST00000448776 712 ntBASIC15.32■□□□□ 0.04
CTGFP29279 TCEA3-204ENST00000461794 713 ntTSL 3 BASIC15.32■□□□□ 0.04
CTGFP29279 EFNA5-204ENST00000509503 637 ntTSL 5 BASIC15.32■□□□□ 0.04
CTGFP29279 AC100858.2-201ENST00000531948 487 ntTSL 3 BASIC15.32■□□□□ 0.04
CTGFP29279 TRPM1-210ENST00000559179 1002 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CTGFP29279 RPL26-209ENST00000584164 873 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
CTGFP29279 GMFG-206ENST00000597595 758 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CTGFP29279 AL031768.1-201ENST00000606542 701 ntBASIC15.32■□□□□ 0.04
CTGFP29279 AC245427.1-201ENST00000633705 760 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
CTGFP29279 DUX4L33-201ENST00000635217 958 ntBASIC15.32■□□□□ 0.04
CTGFP29279 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC15.32■□□□□ 0.04
CTGFP29279 ATF4P4-201ENST00000393544 1930 ntBASIC15.32■□□□□ 0.04
CTGFP29279 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CTGFP29279 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
CTGFP29279 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CTGFP29279 COCH-203ENST00000460581 2688 ntTSL 2 BASIC15.32■□□□□ 0.04
CTGFP29279 AC106872.9-201ENST00000512437 1393 ntBASIC15.32■□□□□ 0.04
CTGFP29279 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CTGFP29279 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
CTGFP29279 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC15.32■□□□□ 0.04
CTGFP29279 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CTGFP29279 LINC02226-201ENST00000501071 1587 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CTGFP29279 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
CTGFP29279 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC15.31■□□□□ 0.04
CTGFP29279 ZFHX4-AS1-201ENST00000518143 1711 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CTGFP29279 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CTGFP29279 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 69.4 ms