Protein–RNA interactions for Protein: P16298

PPP3CB, Serine/threonine-protein phosphatase 2B catalytic subunit beta isoform, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP3CBP16298 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
PPP3CBP16298 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
PPP3CBP16298 AC005865.2-203ENST00000636557 2959 ntTSL 5 BASIC12.7□□□□□ -0.38
PPP3CBP16298 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
PPP3CBP16298 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
PPP3CBP16298 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
PPP3CBP16298 MROH2A-208ENST00000610772 5324 ntAPPRIS P2 TSL 5 BASIC12.7□□□□□ -0.38
PPP3CBP16298 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
PPP3CBP16298 GRIN1-207ENST00000371560 3640 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
PPP3CBP16298 GULP1-207ENST00000409843 2643 ntAPPRIS ALT1 TSL 2 BASIC12.7□□□□□ -0.38
PPP3CBP16298 RUFY4-201ENST00000344321 2352 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
PPP3CBP16298 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
PPP3CBP16298 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
PPP3CBP16298 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
PPP3CBP16298 TBC1D3J-201ENST00000620719 1426 ntBASIC12.7□□□□□ -0.38
PPP3CBP16298 UBE2F-223ENST00000612130 2135 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
PPP3CBP16298 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
PPP3CBP16298 AC073869.1-201ENST00000415574 2762 ntBASIC12.69□□□□□ -0.38
PPP3CBP16298 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
PPP3CBP16298 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
PPP3CBP16298 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC12.69□□□□□ -0.38
PPP3CBP16298 DSTN-201ENST00000246069 3617 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
PPP3CBP16298 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
PPP3CBP16298 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
PPP3CBP16298 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC12.69□□□□□ -0.38
PPP3CBP16298 SPAST-201ENST00000315285 5117 ntAPPRIS P4 TSL 1 (best) BASIC12.69□□□□□ -0.38
PPP3CBP16298 KHSRPP1-201ENST00000427983 1768 ntBASIC12.69□□□□□ -0.38
PPP3CBP16298 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
PPP3CBP16298 PCDHA2-202ENST00000520672 3056 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
PPP3CBP16298 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
PPP3CBP16298 GLIS3-201ENST00000324333 6667 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
PPP3CBP16298 TRIB1-201ENST00000311922 3635 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
PPP3CBP16298 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
PPP3CBP16298 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
PPP3CBP16298 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC12.69□□□□□ -0.38
PPP3CBP16298 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
PPP3CBP16298 KRT18P36-201ENST00000411618 1276 ntBASIC12.69□□□□□ -0.38
PPP3CBP16298 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC12.69□□□□□ -0.38
PPP3CBP16298 AL592076.1-201ENST00000424448 303 ntBASIC12.69□□□□□ -0.38
PPP3CBP16298 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
PPP3CBP16298 AC073150.1-201ENST00000450406 1084 ntBASIC12.69□□□□□ -0.38
PPP3CBP16298 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC12.69□□□□□ -0.38
PPP3CBP16298 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
PPP3CBP16298 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC12.69□□□□□ -0.38
PPP3CBP16298 AC019193.1-201ENST00000506678 823 ntBASIC12.69□□□□□ -0.38
PPP3CBP16298 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
PPP3CBP16298 PGAM1P5-201ENST00000548011 764 ntBASIC12.69□□□□□ -0.38
PPP3CBP16298 TPM1-223ENST00000560445 485 ntTSL 3 BASIC12.69□□□□□ -0.38
PPP3CBP16298 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC12.69□□□□□ -0.38
PPP3CBP16298 NAT9-220ENST00000582870 896 ntTSL 5 BASIC12.69□□□□□ -0.38
PPP3CBP16298 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
PPP3CBP16298 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC12.69□□□□□ -0.38
PPP3CBP16298 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
PPP3CBP16298 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC12.69□□□□□ -0.38
PPP3CBP16298 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
PPP3CBP16298 AL591471.1-201ENST00000621855 229 ntBASIC12.69□□□□□ -0.38
PPP3CBP16298 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
PPP3CBP16298 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
PPP3CBP16298 CAP1-203ENST00000372797 3105 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
PPP3CBP16298 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
PPP3CBP16298 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC12.69□□□□□ -0.38
PPP3CBP16298 MKS1-201ENST00000313863 2091 ntTSL 5 BASIC12.69□□□□□ -0.38
PPP3CBP16298 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
PPP3CBP16298 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
PPP3CBP16298 WASHC5-202ENST00000517845 3667 ntTSL 2 BASIC12.69□□□□□ -0.38
PPP3CBP16298 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC12.69□□□□□ -0.38
PPP3CBP16298 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC12.69□□□□□ -0.38
PPP3CBP16298 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
PPP3CBP16298 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC12.69□□□□□ -0.38
PPP3CBP16298 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
PPP3CBP16298 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
PPP3CBP16298 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
PPP3CBP16298 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC12.69□□□□□ -0.38
PPP3CBP16298 C12orf43-202ENST00000445832 2397 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
PPP3CBP16298 AC023794.5-201ENST00000564380 2157 ntBASIC12.69□□□□□ -0.38
PPP3CBP16298 ABCC6-201ENST00000205557 5747 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
PPP3CBP16298 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
PPP3CBP16298 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
PPP3CBP16298 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
PPP3CBP16298 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
PPP3CBP16298 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
PPP3CBP16298 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
PPP3CBP16298 FAM9C-205ENST00000542843 5858 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
PPP3CBP16298 CAMKV-209ENST00000477224 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
PPP3CBP16298 SPATS2-223ENST00000553127 3320 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
PPP3CBP16298 MAP3K12-203ENST00000547035 2944 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
PPP3CBP16298 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC12.68□□□□□ -0.38
PPP3CBP16298 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
PPP3CBP16298 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
PPP3CBP16298 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
PPP3CBP16298 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
PPP3CBP16298 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
PPP3CBP16298 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
PPP3CBP16298 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
PPP3CBP16298 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
PPP3CBP16298 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
PPP3CBP16298 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
PPP3CBP16298 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
PPP3CBP16298 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
PPP3CBP16298 CELF4-201ENST00000334919 3542 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 59.2 ms