Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 LINC00638-201ENST00000555578 2518 ntBASIC12.6□□□□□ -0.39
HLA-DOBP13765 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
HLA-DOBP13765 HECTD1-219ENST00000611816 8980 ntTSL 5 BASIC12.6□□□□□ -0.39
HLA-DOBP13765 LINC01535-206ENST00000592712 1699 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
HLA-DOBP13765 WDR81-205ENST00000437219 3184 ntTSL 2 BASIC12.6□□□□□ -0.39
HLA-DOBP13765 EPHA5-203ENST00000432638 3662 ntTSL 5 BASIC12.6□□□□□ -0.39
HLA-DOBP13765 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
HLA-DOBP13765 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
HLA-DOBP13765 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
HLA-DOBP13765 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
HLA-DOBP13765 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
HLA-DOBP13765 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
HLA-DOBP13765 ELAVL4-207ENST00000448907 1951 ntTSL 2 BASIC12.6□□□□□ -0.39
HLA-DOBP13765 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
HLA-DOBP13765 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC12.59□□□□□ -0.39
HLA-DOBP13765 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
HLA-DOBP13765 FER1L4-204ENST00000430275 3281 ntTSL 5 BASIC12.59□□□□□ -0.39
HLA-DOBP13765 PNKD-203ENST00000273077 3021 ntAPPRIS P4 TSL 1 (best) BASIC12.59□□□□□ -0.39
HLA-DOBP13765 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC12.59□□□□□ -0.39
HLA-DOBP13765 DSTN-203ENST00000474024 1853 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
HLA-DOBP13765 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC12.59□□□□□ -0.39
HLA-DOBP13765 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
HLA-DOBP13765 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
HLA-DOBP13765 AL356753.1-201ENST00000427035 2018 ntTSL 2 BASIC12.59□□□□□ -0.39
HLA-DOBP13765 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
HLA-DOBP13765 THAP2-201ENST00000308086 5719 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
HLA-DOBP13765 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC12.59□□□□□ -0.39
HLA-DOBP13765 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
HLA-DOBP13765 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
HLA-DOBP13765 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
HLA-DOBP13765 KRT17P5-201ENST00000332088 839 ntBASIC12.59□□□□□ -0.39
HLA-DOBP13765 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
HLA-DOBP13765 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
HLA-DOBP13765 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC12.59□□□□□ -0.39
HLA-DOBP13765 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
HLA-DOBP13765 BAX-205ENST00000391871 687 ntTSL 5 BASIC12.59□□□□□ -0.39
HLA-DOBP13765 CYP46A4P-201ENST00000414953 267 ntBASIC12.59□□□□□ -0.39
HLA-DOBP13765 ISCA2P1-201ENST00000425548 448 ntBASIC12.59□□□□□ -0.39
HLA-DOBP13765 SPTLC1P5-201ENST00000450718 252 ntBASIC12.59□□□□□ -0.39
HLA-DOBP13765 BX284668.4-201ENST00000453917 508 ntBASIC12.59□□□□□ -0.39
HLA-DOBP13765 KRT8P13-201ENST00000463294 1010 ntBASIC12.59□□□□□ -0.39
HLA-DOBP13765 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
HLA-DOBP13765 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
HLA-DOBP13765 ELP5-212ENST00000574255 671 ntTSL 2 BASIC12.59□□□□□ -0.39
HLA-DOBP13765 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC12.59□□□□□ -0.39
HLA-DOBP13765 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
HLA-DOBP13765 GPR182-203ENST00000622922 591 ntBASIC12.59□□□□□ -0.39
HLA-DOBP13765 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC12.59□□□□□ -0.39
HLA-DOBP13765 AC244452.3-201ENST00000636814 210 ntBASIC12.59□□□□□ -0.39
HLA-DOBP13765 ADAMTS5-201ENST00000284987 9056 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
HLA-DOBP13765 EDEM3-202ENST00000367512 6678 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
HLA-DOBP13765 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
HLA-DOBP13765 RNF214-201ENST00000300650 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
HLA-DOBP13765 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC12.59□□□□□ -0.39
HLA-DOBP13765 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
HLA-DOBP13765 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
HLA-DOBP13765 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
HLA-DOBP13765 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
HLA-DOBP13765 AC020658.7-201ENST00000624274 2442 ntBASIC12.59□□□□□ -0.39
HLA-DOBP13765 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC12.59□□□□□ -0.39
HLA-DOBP13765 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC12.59□□□□□ -0.39
HLA-DOBP13765 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
HLA-DOBP13765 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
HLA-DOBP13765 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
HLA-DOBP13765 MAP2K3-214ENST00000613338 2029 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
HLA-DOBP13765 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
HLA-DOBP13765 SNCAIP-222ENST00000542191 2729 ntTSL 5 BASIC12.59□□□□□ -0.39
HLA-DOBP13765 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
HLA-DOBP13765 KLHL32-206ENST00000544166 2864 ntTSL 2 BASIC12.59□□□□□ -0.39
HLA-DOBP13765 TSC22D3-204ENST00000372384 2199 ntTSL 2 BASIC12.59□□□□□ -0.39
HLA-DOBP13765 KCNIP1-210ENST00000636734 1613 ntTSL 5 BASIC12.59□□□□□ -0.39
HLA-DOBP13765 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
HLA-DOBP13765 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
HLA-DOBP13765 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
HLA-DOBP13765 PPT1-213ENST00000641319 2388 ntBASIC12.58□□□□□ -0.4
HLA-DOBP13765 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC12.58□□□□□ -0.4
HLA-DOBP13765 ENO2-205ENST00000535366 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
HLA-DOBP13765 POU2AF1-201ENST00000393067 3295 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
HLA-DOBP13765 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
HLA-DOBP13765 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
HLA-DOBP13765 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
HLA-DOBP13765 IRS1-201ENST00000305123 9705 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
HLA-DOBP13765 AC004623.1-201ENST00000624592 2127 ntBASIC12.58□□□□□ -0.4
HLA-DOBP13765 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
HLA-DOBP13765 DGKD-201ENST00000264057 6297 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
HLA-DOBP13765 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
HLA-DOBP13765 ARHGAP45-203ENST00000543365 3750 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
HLA-DOBP13765 YPEL4-201ENST00000300022 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
HLA-DOBP13765 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
HLA-DOBP13765 CNN2-202ENST00000348419 2033 ntTSL 2 BASIC12.58□□□□□ -0.4
HLA-DOBP13765 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC12.58□□□□□ -0.4
HLA-DOBP13765 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
HLA-DOBP13765 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC12.58□□□□□ -0.4
HLA-DOBP13765 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC12.58□□□□□ -0.4
HLA-DOBP13765 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC12.58□□□□□ -0.4
HLA-DOBP13765 AC244107.1-201ENST00000442033 332 ntBASIC12.58□□□□□ -0.4
HLA-DOBP13765 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC12.58□□□□□ -0.4
HLA-DOBP13765 AKR7A2P1-201ENST00000460134 915 ntBASIC12.58□□□□□ -0.4
HLA-DOBP13765 SCARNA20.5-201ENST00000516991 142 ntBASIC12.58□□□□□ -0.4
HLA-DOBP13765 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC12.58□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 58.4 ms