Protein–RNA interactions for Protein: P07858

CTSB, Cathepsin B, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSBP07858 TPM4-202ENST00000344824 1417 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
CTSBP07858 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CTSBP07858 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CTSBP07858 FDFT1-214ENST00000528812 2013 ntTSL 2 BASIC13.2□□□□□ -0.3
CTSBP07858 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
CTSBP07858 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
CTSBP07858 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
CTSBP07858 MIR3936HG-204ENST00000621103 1793 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CTSBP07858 Z98885.3-201ENST00000624882 1757 ntBASIC13.2□□□□□ -0.3
CTSBP07858 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CTSBP07858 Z98885.2-201ENST00000565177 1567 ntTSL 2 BASIC13.2□□□□□ -0.3
CTSBP07858 FHL2-206ENST00000408995 1367 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
CTSBP07858 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CTSBP07858 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
CTSBP07858 GLIPR1L2-201ENST00000320460 1729 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
CTSBP07858 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
CTSBP07858 TNFRSF1A-202ENST00000366159 1339 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CTSBP07858 MAEA-207ENST00000505177 1340 ntTSL 5 BASIC13.19□□□□□ -0.3
CTSBP07858 YIPF1-201ENST00000072644 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CTSBP07858 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC13.19□□□□□ -0.3
CTSBP07858 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CTSBP07858 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC13.19□□□□□ -0.3
CTSBP07858 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CTSBP07858 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CTSBP07858 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CTSBP07858 PIGL-201ENST00000225609 1137 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CTSBP07858 IL23A-201ENST00000228534 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CTSBP07858 DCD-201ENST00000293371 645 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
CTSBP07858 CXCL12-205ENST00000395794 1052 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CTSBP07858 IZUMO1R-202ENST00000440961 805 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
CTSBP07858 PRKCZ-AS1-202ENST00000444529 622 ntTSL 3 BASIC13.19□□□□□ -0.3
CTSBP07858 AP003390.1-201ENST00000533253 523 ntTSL 5 BASIC13.19□□□□□ -0.3
CTSBP07858 TXNDC17-208ENST00000574838 746 ntTSL 3 BASIC13.19□□□□□ -0.3
CTSBP07858 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC13.19□□□□□ -0.3
CTSBP07858 MIR5196-201ENST00000578146 115 ntBASIC13.19□□□□□ -0.3
CTSBP07858 RN7SL556P-201ENST00000582856 298 ntBASIC13.19□□□□□ -0.3
CTSBP07858 AC012073.1-201ENST00000606114 1108 ntBASIC13.19□□□□□ -0.3
CTSBP07858 AL139424.3-202ENST00000641619 917 ntBASIC13.19□□□□□ -0.3
CTSBP07858 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
CTSBP07858 MRPL55-205ENST00000366731 1423 ntTSL 2 BASIC13.19□□□□□ -0.3
CTSBP07858 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CTSBP07858 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CTSBP07858 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CTSBP07858 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
CTSBP07858 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CTSBP07858 CAMKK2-204ENST00000392473 2967 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CTSBP07858 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
CTSBP07858 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CTSBP07858 SLC25A3-216ENST00000551917 1359 ntAPPRIS P4 TSL 2 BASIC13.19□□□□□ -0.3
CTSBP07858 ASGR1-209ENST00000619926 1384 ntTSL 5 BASIC13.19□□□□□ -0.3
CTSBP07858 C1R-201ENST00000535233 2211 ntTSL 2 BASIC13.19□□□□□ -0.3
CTSBP07858 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CTSBP07858 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC13.18□□□□□ -0.3
CTSBP07858 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC13.18□□□□□ -0.3
CTSBP07858 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CTSBP07858 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CTSBP07858 VASH1-AS1-202ENST00000556072 1684 ntTSL 2 BASIC13.18□□□□□ -0.3
CTSBP07858 AC040160.2-201ENST00000623816 1675 ntBASIC13.18□□□□□ -0.3
CTSBP07858 AL031056.1-202ENST00000635954 2193 ntTSL 5 BASIC13.18□□□□□ -0.3
CTSBP07858 BIRC2-208ENST00000532672 2617 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
CTSBP07858 LAIR1-201ENST00000348231 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
CTSBP07858 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
CTSBP07858 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC13.18□□□□□ -0.3
CTSBP07858 AAR2-201ENST00000320849 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CTSBP07858 GDPD5-215ENST00000533805 2424 ntTSL 2 BASIC13.18□□□□□ -0.3
CTSBP07858 TMEM40-205ENST00000435575 1785 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
CTSBP07858 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
CTSBP07858 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CTSBP07858 COASY-202ENST00000421097 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CTSBP07858 ANK1-203ENST00000314214 1185 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CTSBP07858 POLR2L-201ENST00000322028 892 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CTSBP07858 PCLAF-202ENST00000380258 911 ntTSL 2 BASIC13.18□□□□□ -0.3
CTSBP07858 TRBV7-3-201ENST00000390361 397 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
CTSBP07858 GGTLC4P-201ENST00000402176 664 ntBASIC13.18□□□□□ -0.3
CTSBP07858 MIR1307-201ENST00000408840 149 ntBASIC13.18□□□□□ -0.3
CTSBP07858 AL391839.2-201ENST00000412085 383 ntTSL 5 BASIC13.18□□□□□ -0.3
CTSBP07858 AL627389.1-201ENST00000413508 1182 ntBASIC13.18□□□□□ -0.3
CTSBP07858 NDUFS7-203ENST00000414651 841 ntTSL 5 BASIC13.18□□□□□ -0.3
CTSBP07858 LINC00866-201ENST00000427379 418 ntTSL 2 BASIC13.18□□□□□ -0.3
CTSBP07858 EFNA4-203ENST00000427683 1052 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
CTSBP07858 AC006529.1-201ENST00000459978 637 ntBASIC13.18□□□□□ -0.3
CTSBP07858 FAM3D-AS1-201ENST00000464125 821 ntTSL 3 BASIC13.18□□□□□ -0.3
CTSBP07858 ATP1A4-205ENST00000470705 886 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CTSBP07858 AC084752.1-201ENST00000509766 622 ntBASIC13.18□□□□□ -0.3
CTSBP07858 AC022858.1-202ENST00000521084 393 ntTSL 3 BASIC13.18□□□□□ -0.3
CTSBP07858 AC073573.1-201ENST00000550908 481 ntTSL 3 BASIC13.18□□□□□ -0.3
CTSBP07858 CR392039.2-201ENST00000623182 509 ntBASIC13.18□□□□□ -0.3
CTSBP07858 TREX1-206ENST00000629913 945 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
CTSBP07858 MAPT-IT1-201ENST00000624111 3016 ntBASIC13.18□□□□□ -0.3
CTSBP07858 NAALADL1-201ENST00000340252 2376 ntTSL 5 BASIC13.18□□□□□ -0.3
CTSBP07858 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CTSBP07858 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CTSBP07858 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC13.18□□□□□ -0.3
CTSBP07858 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC13.18□□□□□ -0.3
CTSBP07858 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CTSBP07858 DAXX-201ENST00000266000 2606 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
CTSBP07858 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CTSBP07858 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CTSBP07858 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CTSBP07858 AC021305.1-201ENST00000520656 1514 ntBASIC13.18□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms