Protein–RNA interactions for Protein: P05067

APP, Amyloid-beta A4 protein, humanhuman

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APPP05067 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC16.88■□□□□ 0.29
APPP05067 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC16.88■□□□□ 0.29
APPP05067 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
APPP05067 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
APPP05067 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
APPP05067 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
APPP05067 BTBD9-206ENST00000481247 8525 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
APPP05067 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
APPP05067 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC16.88■□□□□ 0.29
APPP05067 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
APPP05067 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
APPP05067 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC16.88■□□□□ 0.29
APPP05067 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
APPP05067 HECTD1-203ENST00000553700 9080 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
APPP05067 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
APPP05067 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
APPP05067 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
APPP05067 SAT1-201ENST00000379251 801 ntTSL 2 BASIC16.88■□□□□ 0.29
APPP05067 SAT1-202ENST00000379253 909 ntTSL 2 BASIC16.88■□□□□ 0.29
APPP05067 SAT1-203ENST00000379254 868 ntTSL 3 BASIC16.88■□□□□ 0.29
APPP05067 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
APPP05067 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
APPP05067 DNAJB1P1-201ENST00000429417 1024 ntBASIC16.88■□□□□ 0.29
APPP05067 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
APPP05067 SLC25A15P3-201ENST00000505530 290 ntBASIC16.88■□□□□ 0.29
APPP05067 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC16.88■□□□□ 0.29
APPP05067 RNA5SP423-201ENST00000517127 109 ntBASIC16.88■□□□□ 0.29
APPP05067 NEU3-205ENST00000531619 582 ntTSL 5 BASIC16.88■□□□□ 0.29
APPP05067 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC16.88■□□□□ 0.29
APPP05067 RN7SL455P-201ENST00000580629 282 ntBASIC16.88■□□□□ 0.29
APPP05067 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC16.88■□□□□ 0.29
APPP05067 MIR4522-201ENST00000584932 87 ntBASIC16.88■□□□□ 0.29
APPP05067 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC16.88■□□□□ 0.29
APPP05067 HCG18-245ENST00000602550 559 ntTSL 4 BASIC16.88■□□□□ 0.29
APPP05067 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC16.88■□□□□ 0.29
APPP05067 AC009560.1-201ENST00000620208 434 ntBASIC16.88■□□□□ 0.29
APPP05067 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC16.88■□□□□ 0.29
APPP05067 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
APPP05067 SMC6-201ENST00000351948 5173 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
APPP05067 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
APPP05067 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
APPP05067 TEKT4P2-202ENST00000559466 1312 ntBASIC16.88■□□□□ 0.29
APPP05067 MCC-201ENST00000302475 8257 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
APPP05067 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
APPP05067 API5-208ENST00000531273 1868 ntTSL 2 BASIC16.88■□□□□ 0.29
APPP05067 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
APPP05067 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC16.88■□□□□ 0.29
APPP05067 ACOX1-201ENST00000293217 7514 ntAPPRIS P5 TSL 1 (best) BASIC16.88■□□□□ 0.29
APPP05067 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
APPP05067 AGAP10P-201ENST00000454844 2418 ntBASIC16.88■□□□□ 0.29
APPP05067 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC16.88■□□□□ 0.29
APPP05067 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
APPP05067 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
APPP05067 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
APPP05067 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
APPP05067 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC16.88■□□□□ 0.29
APPP05067 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC16.88■□□□□ 0.29
APPP05067 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
APPP05067 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
APPP05067 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
APPP05067 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
APPP05067 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
APPP05067 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
APPP05067 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
APPP05067 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC16.87■□□□□ 0.29
APPP05067 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
APPP05067 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
APPP05067 ELAVL1-201ENST00000407627 6015 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
APPP05067 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
APPP05067 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
APPP05067 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
APPP05067 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
APPP05067 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
APPP05067 UFM1-202ENST00000379649 846 ntTSL 4 BASIC16.87■□□□□ 0.29
APPP05067 AP000356.3-201ENST00000382243 753 ntBASIC16.87■□□□□ 0.29
APPP05067 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC16.87■□□□□ 0.29
APPP05067 TIMP1-205ENST00000456754 1095 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
APPP05067 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC16.87■□□□□ 0.29
APPP05067 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC16.87■□□□□ 0.29
APPP05067 AC019193.1-201ENST00000506678 823 ntBASIC16.87■□□□□ 0.29
APPP05067 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
APPP05067 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
APPP05067 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
APPP05067 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC16.87■□□□□ 0.29
APPP05067 PRKXP1-201ENST00000561423 1122 ntBASIC16.87■□□□□ 0.29
APPP05067 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC16.87■□□□□ 0.29
APPP05067 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC16.87■□□□□ 0.29
APPP05067 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC16.87■□□□□ 0.29
APPP05067 AC016629.1-201ENST00000596579 586 ntBASIC16.87■□□□□ 0.29
APPP05067 AC103810.10-201ENST00000606504 343 ntBASIC16.87■□□□□ 0.29
APPP05067 AC051619.9-201ENST00000623237 597 ntBASIC16.87■□□□□ 0.29
APPP05067 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC16.87■□□□□ 0.29
APPP05067 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
APPP05067 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
APPP05067 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
APPP05067 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
APPP05067 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
APPP05067 TCF12-201ENST00000267811 6061 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
APPP05067 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
APPP05067 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms