Protein–RNA interactions for Protein: P04406

GAPDH, Glyceraldehyde-3-phosphate dehydrogenase, humanhuman

Known RBP Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDHP04406 MDM1-203ENST00000393543 2718 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
GAPDHP04406 DMTN-220ENST00000523266 2735 ntTSL 5 BASIC11.82□□□□□ -0.52
GAPDHP04406 AOC1-204ENST00000467291 2857 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
GAPDHP04406 IL11RA-208ENST00000555003 3008 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
GAPDHP04406 FOXM1-210ENST00000627656 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
GAPDHP04406 SLC46A1-208ENST00000618626 5363 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
GAPDHP04406 GCOM1-214ENST00000587652 2329 ntAPPRIS ALT2 TSL 2 BASIC11.82□□□□□ -0.52
GAPDHP04406 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
GAPDHP04406 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC11.82□□□□□ -0.52
GAPDHP04406 GLRX3-202ENST00000368644 3827 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
GAPDHP04406 AC064801.2-201ENST00000625052 1303 ntBASIC11.82□□□□□ -0.52
GAPDHP04406 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
GAPDHP04406 ABCD1P2-201ENST00000429313 1601 ntBASIC11.82□□□□□ -0.52
GAPDHP04406 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
GAPDHP04406 GHET1-201ENST00000627071 1906 ntBASIC11.82□□□□□ -0.52
GAPDHP04406 AMT-239ENST00000636865 1914 ntTSL 5 BASIC11.82□□□□□ -0.52
GAPDHP04406 AC115284.2-201ENST00000624646 2054 ntBASIC11.82□□□□□ -0.52
GAPDHP04406 YWHAQ-202ENST00000381844 2216 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
GAPDHP04406 SLC43A3-214ENST00000529554 2207 ntAPPRIS P3 TSL 2 BASIC11.82□□□□□ -0.52
GAPDHP04406 FSTL4-207ENST00000621681 2660 ntTSL 5 BASIC11.82□□□□□ -0.52
GAPDHP04406 TMEM41A-203ENST00000421852 2827 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
GAPDHP04406 EPB41L1-202ENST00000338074 6266 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
GAPDHP04406 NUTM2E-202ENST00000602967 3623 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
GAPDHP04406 CDC20B-203ENST00000381375 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
GAPDHP04406 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
GAPDHP04406 AC244394.1-201ENST00000435000 1665 ntBASIC11.81□□□□□ -0.52
GAPDHP04406 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
GAPDHP04406 VAMP2-201ENST00000316509 2153 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
GAPDHP04406 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
GAPDHP04406 PPP1R11-205ENST00000376772 1731 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
GAPDHP04406 THBS2-201ENST00000366787 5811 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
GAPDHP04406 SERBP1-204ENST00000370995 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
GAPDHP04406 SMIM12-206ENST00000521580 3454 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
GAPDHP04406 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
GAPDHP04406 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
GAPDHP04406 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC11.81□□□□□ -0.52
GAPDHP04406 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC11.81□□□□□ -0.52
GAPDHP04406 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC11.81□□□□□ -0.52
GAPDHP04406 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
GAPDHP04406 AC003958.1-201ENST00000435883 421 ntBASIC11.81□□□□□ -0.52
GAPDHP04406 BNIP3P42-201ENST00000454982 569 ntBASIC11.81□□□□□ -0.52
GAPDHP04406 TUBB8P8-201ENST00000458717 1058 ntBASIC11.81□□□□□ -0.52
GAPDHP04406 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC11.81□□□□□ -0.52
GAPDHP04406 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC11.81□□□□□ -0.52
GAPDHP04406 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
GAPDHP04406 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC11.81□□□□□ -0.52
GAPDHP04406 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC11.81□□□□□ -0.52
GAPDHP04406 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
GAPDHP04406 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
GAPDHP04406 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC11.81□□□□□ -0.52
GAPDHP04406 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC11.81□□□□□ -0.52
GAPDHP04406 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC11.81□□□□□ -0.52
GAPDHP04406 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
GAPDHP04406 DRG2-220ENST00000583355 891 ntTSL 3 BASIC11.81□□□□□ -0.52
GAPDHP04406 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC11.81□□□□□ -0.52
GAPDHP04406 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC11.81□□□□□ -0.52
GAPDHP04406 KLK3-207ENST00000595952 969 ntTSL 3 BASIC11.81□□□□□ -0.52
GAPDHP04406 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC11.81□□□□□ -0.52
GAPDHP04406 BNIP3P29-201ENST00000598302 571 ntBASIC11.81□□□□□ -0.52
GAPDHP04406 AC011447.5-201ENST00000616168 564 ntBASIC11.81□□□□□ -0.52
GAPDHP04406 AC009542.2-202ENST00000619004 1067 ntBASIC11.81□□□□□ -0.52
GAPDHP04406 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
GAPDHP04406 NHEJ1-201ENST00000356853 2094 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
GAPDHP04406 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
GAPDHP04406 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
GAPDHP04406 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC11.81□□□□□ -0.52
GAPDHP04406 SKA3-202ENST00000314759 2919 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
GAPDHP04406 CHD5-201ENST00000262450 9646 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
GAPDHP04406 ARMC7-201ENST00000245543 2126 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
GAPDHP04406 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
GAPDHP04406 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
GAPDHP04406 AL008718.2-201ENST00000609206 1313 ntBASIC11.81□□□□□ -0.52
GAPDHP04406 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
GAPDHP04406 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
GAPDHP04406 NXF1-201ENST00000294172 2346 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
GAPDHP04406 DYNC1I1-202ENST00000359388 2843 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
GAPDHP04406 STRA6-222ENST00000616000 2843 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
GAPDHP04406 LYN-204ENST00000520220 5808 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
GAPDHP04406 PCID2-205ENST00000375477 1654 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
GAPDHP04406 NCSTN-202ENST00000368063 3031 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
GAPDHP04406 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC11.81□□□□□ -0.52
GAPDHP04406 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC11.81□□□□□ -0.52
GAPDHP04406 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC11.81□□□□□ -0.52
GAPDHP04406 CELF2-216ENST00000637215 2724 ntTSL 5 BASIC11.8□□□□□ -0.52
GAPDHP04406 CDK20-209ENST00000605159 1860 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
GAPDHP04406 EIF3CL-201ENST00000380876 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
GAPDHP04406 UGGT2-201ENST00000376712 2240 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
GAPDHP04406 TCF12-201ENST00000267811 6061 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
GAPDHP04406 APBA2-212ENST00000561069 3138 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
GAPDHP04406 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
GAPDHP04406 CTCFL-208ENST00000432255 2955 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
GAPDHP04406 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
GAPDHP04406 PRPF38A-201ENST00000257181 5274 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
GAPDHP04406 LILRB1-203ENST00000396317 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
GAPDHP04406 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
GAPDHP04406 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
GAPDHP04406 ZFAND3-201ENST00000287218 3366 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
GAPDHP04406 RAPGEF4-AS1-202ENST00000435328 4625 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
GAPDHP04406 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC11.8□□□□□ -0.52
GAPDHP04406 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms