Protein–RNA interactions for Protein: Q9Y5F0

PCDHB13, Protocadherin beta-13, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13Q9Y5F0 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC15.82■□□□□ 0.12
PCDHB13Q9Y5F0 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PCDHB13Q9Y5F0 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PCDHB13Q9Y5F0 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PCDHB13Q9Y5F0 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PCDHB13Q9Y5F0 AC092053.3-201ENST00000641308 4975 ntBASIC15.82■□□□□ 0.12
PCDHB13Q9Y5F0 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
PCDHB13Q9Y5F0 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
PCDHB13Q9Y5F0 PIGF-202ENST00000306465 1061 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PCDHB13Q9Y5F0 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PCDHB13Q9Y5F0 JTB-202ENST00000356648 1040 ntTSL 2 BASIC15.82■□□□□ 0.12
PCDHB13Q9Y5F0 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC15.82■□□□□ 0.12
PCDHB13Q9Y5F0 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
PCDHB13Q9Y5F0 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
PCDHB13Q9Y5F0 PYM1-202ENST00000398213 1073 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
PCDHB13Q9Y5F0 AL513475.2-201ENST00000402316 392 ntBASIC15.82■□□□□ 0.12
PCDHB13Q9Y5F0 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC15.82■□□□□ 0.12
PCDHB13Q9Y5F0 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
PCDHB13Q9Y5F0 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC15.82■□□□□ 0.12
PCDHB13Q9Y5F0 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PCDHB13Q9Y5F0 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC15.82■□□□□ 0.12
PCDHB13Q9Y5F0 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC15.82■□□□□ 0.12
PCDHB13Q9Y5F0 OARD1-204ENST00000464633 717 ntTSL 2 BASIC15.82■□□□□ 0.12
PCDHB13Q9Y5F0 AC125604.1-201ENST00000496255 707 ntBASIC15.82■□□□□ 0.12
PCDHB13Q9Y5F0 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
PCDHB13Q9Y5F0 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC15.82■□□□□ 0.12
PCDHB13Q9Y5F0 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PCDHB13Q9Y5F0 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC15.82■□□□□ 0.12
PCDHB13Q9Y5F0 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC15.82■□□□□ 0.12
PCDHB13Q9Y5F0 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
PCDHB13Q9Y5F0 ONECUT1-202ENST00000560699 996 ntTSL 3 BASIC15.82■□□□□ 0.12
PCDHB13Q9Y5F0 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC15.82■□□□□ 0.12
PCDHB13Q9Y5F0 AL451050.2-201ENST00000606967 682 ntBASIC15.82■□□□□ 0.12
PCDHB13Q9Y5F0 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
PCDHB13Q9Y5F0 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC15.82■□□□□ 0.12
PCDHB13Q9Y5F0 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PCDHB13Q9Y5F0 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
PCDHB13Q9Y5F0 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PCDHB13Q9Y5F0 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC15.82■□□□□ 0.12
PCDHB13Q9Y5F0 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC15.82■□□□□ 0.12
PCDHB13Q9Y5F0 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PCDHB13Q9Y5F0 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PCDHB13Q9Y5F0 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PCDHB13Q9Y5F0 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PCDHB13Q9Y5F0 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
PCDHB13Q9Y5F0 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PCDHB13Q9Y5F0 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PCDHB13Q9Y5F0 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC15.82■□□□□ 0.12
PCDHB13Q9Y5F0 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC15.82■□□□□ 0.12
PCDHB13Q9Y5F0 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
PCDHB13Q9Y5F0 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
PCDHB13Q9Y5F0 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
PCDHB13Q9Y5F0 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC15.82■□□□□ 0.12
PCDHB13Q9Y5F0 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PCDHB13Q9Y5F0 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
PCDHB13Q9Y5F0 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
PCDHB13Q9Y5F0 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PCDHB13Q9Y5F0 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PCDHB13Q9Y5F0 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC15.81■□□□□ 0.12
PCDHB13Q9Y5F0 AC135068.1-201ENST00000332663 1084 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
PCDHB13Q9Y5F0 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PCDHB13Q9Y5F0 USP9YP14-201ENST00000430663 563 ntBASIC15.81■□□□□ 0.12
PCDHB13Q9Y5F0 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC15.81■□□□□ 0.12
PCDHB13Q9Y5F0 RNFT1P2-201ENST00000443064 757 ntBASIC15.81■□□□□ 0.12
PCDHB13Q9Y5F0 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PCDHB13Q9Y5F0 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
PCDHB13Q9Y5F0 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
PCDHB13Q9Y5F0 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC15.81■□□□□ 0.12
PCDHB13Q9Y5F0 AC091804.1-201ENST00000486888 567 ntBASIC15.81■□□□□ 0.12
PCDHB13Q9Y5F0 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PCDHB13Q9Y5F0 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC15.81■□□□□ 0.12
PCDHB13Q9Y5F0 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PCDHB13Q9Y5F0 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PCDHB13Q9Y5F0 EMC4-209ENST00000559421 497 ntTSL 2 BASIC15.81■□□□□ 0.12
PCDHB13Q9Y5F0 AC009269.2-201ENST00000559892 474 ntBASIC15.81■□□□□ 0.12
PCDHB13Q9Y5F0 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC15.81■□□□□ 0.12
PCDHB13Q9Y5F0 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC15.81■□□□□ 0.12
PCDHB13Q9Y5F0 AC064807.4-201ENST00000607201 407 ntBASIC15.81■□□□□ 0.12
PCDHB13Q9Y5F0 AC138649.2-201ENST00000615886 705 ntBASIC15.81■□□□□ 0.12
PCDHB13Q9Y5F0 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PCDHB13Q9Y5F0 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PCDHB13Q9Y5F0 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PCDHB13Q9Y5F0 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PCDHB13Q9Y5F0 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
PCDHB13Q9Y5F0 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PCDHB13Q9Y5F0 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PCDHB13Q9Y5F0 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC15.8■□□□□ 0.12
PCDHB13Q9Y5F0 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
PCDHB13Q9Y5F0 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PCDHB13Q9Y5F0 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
PCDHB13Q9Y5F0 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PCDHB13Q9Y5F0 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PCDHB13Q9Y5F0 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PCDHB13Q9Y5F0 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PCDHB13Q9Y5F0 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
PCDHB13Q9Y5F0 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC15.8■□□□□ 0.12
PCDHB13Q9Y5F0 AC093915.1-201ENST00000605740 1543 ntBASIC15.8■□□□□ 0.12
PCDHB13Q9Y5F0 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC15.8■□□□□ 0.12
PCDHB13Q9Y5F0 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PCDHB13Q9Y5F0 AP000941.1-201ENST00000530198 1388 ntTSL 3 BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 83.1 ms