Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 TXNDC9-201ENST00000264255 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
HMG20BQ9P0W2 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
HMG20BQ9P0W2 FGD4-203ENST00000472289 1629 ntTSL 2 BASIC17.02■□□□□ 0.31
HMG20BQ9P0W2 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC17.02■□□□□ 0.31
HMG20BQ9P0W2 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
HMG20BQ9P0W2 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC17.02■□□□□ 0.31
HMG20BQ9P0W2 CNTNAP3P2-201ENST00000617175 3861 ntBASIC17.02■□□□□ 0.31
HMG20BQ9P0W2 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
HMG20BQ9P0W2 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
HMG20BQ9P0W2 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
HMG20BQ9P0W2 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.31
HMG20BQ9P0W2 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
HMG20BQ9P0W2 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
HMG20BQ9P0W2 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
HMG20BQ9P0W2 INSC-205ENST00000525218 1576 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
HMG20BQ9P0W2 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
HMG20BQ9P0W2 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
HMG20BQ9P0W2 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
HMG20BQ9P0W2 RPL18A-205ENST00000600147 1391 ntTSL 5 BASIC17.02■□□□□ 0.31
HMG20BQ9P0W2 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HMG20BQ9P0W2 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
HMG20BQ9P0W2 PHB-210ENST00000511832 1509 ntTSL 2 BASIC17.01■□□□□ 0.31
HMG20BQ9P0W2 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HMG20BQ9P0W2 C12orf65-204ENST00000429587 1326 ntAPPRIS P2 TSL 2 BASIC17.01■□□□□ 0.31
HMG20BQ9P0W2 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC17.01■□□□□ 0.31
HMG20BQ9P0W2 PPARG-205ENST00000397010 2017 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HMG20BQ9P0W2 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC17.01■□□□□ 0.31
HMG20BQ9P0W2 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
HMG20BQ9P0W2 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HMG20BQ9P0W2 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC17.01■□□□□ 0.31
HMG20BQ9P0W2 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
HMG20BQ9P0W2 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HMG20BQ9P0W2 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC17.01■□□□□ 0.31
HMG20BQ9P0W2 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HMG20BQ9P0W2 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HMG20BQ9P0W2 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
HMG20BQ9P0W2 BCL2L11-202ENST00000337565 720 ntTSL 5 BASIC17.01■□□□□ 0.31
HMG20BQ9P0W2 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HMG20BQ9P0W2 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HMG20BQ9P0W2 CRIP3-202ENST00000372569 962 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HMG20BQ9P0W2 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
HMG20BQ9P0W2 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
HMG20BQ9P0W2 OR52M2P-201ENST00000414298 959 ntBASIC17.01■□□□□ 0.31
HMG20BQ9P0W2 CSAG1-204ENST00000452779 627 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
HMG20BQ9P0W2 STK24P1-201ENST00000455035 1291 ntBASIC17.01■□□□□ 0.31
HMG20BQ9P0W2 RPP40-203ENST00000464646 1042 ntTSL 5 BASIC17.01■□□□□ 0.31
HMG20BQ9P0W2 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC17.01■□□□□ 0.31
HMG20BQ9P0W2 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC17.01■□□□□ 0.31
HMG20BQ9P0W2 AC026310.2-201ENST00000546353 728 ntTSL 4 BASIC17.01■□□□□ 0.31
HMG20BQ9P0W2 AC020659.1-202ENST00000564432 531 ntTSL 5 BASIC17.01■□□□□ 0.31
HMG20BQ9P0W2 AC006435.2-201ENST00000574290 846 ntTSL 5 BASIC17.01■□□□□ 0.31
HMG20BQ9P0W2 AC132825.4-202ENST00000578792 434 ntBASIC17.01■□□□□ 0.31
HMG20BQ9P0W2 STAT5A-208ENST00000587646 1022 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
HMG20BQ9P0W2 HIST1H2BE-201ENST00000614097 497 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
HMG20BQ9P0W2 AP001065.2-201ENST00000617205 644 ntBASIC17.01■□□□□ 0.31
HMG20BQ9P0W2 RPL13A-213ENST00000621674 1098 ntTSL 5 BASIC17.01■□□□□ 0.31
HMG20BQ9P0W2 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC17.01■□□□□ 0.31
HMG20BQ9P0W2 HEXA-206ENST00000566304 1795 ntTSL 2 BASIC17.01■□□□□ 0.31
HMG20BQ9P0W2 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
HMG20BQ9P0W2 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC17.01■□□□□ 0.31
HMG20BQ9P0W2 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC17.01■□□□□ 0.31
HMG20BQ9P0W2 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC17.01■□□□□ 0.31
HMG20BQ9P0W2 ANXA5-202ENST00000501272 1363 ntTSL 5 BASIC17.01■□□□□ 0.31
HMG20BQ9P0W2 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC17.01■□□□□ 0.31
HMG20BQ9P0W2 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
HMG20BQ9P0W2 SS18-201ENST00000269137 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
HMG20BQ9P0W2 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC17■□□□□ 0.31
HMG20BQ9P0W2 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC17■□□□□ 0.31
HMG20BQ9P0W2 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
HMG20BQ9P0W2 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HMG20BQ9P0W2 TUBB4AP1-201ENST00000450755 1325 ntBASIC17■□□□□ 0.31
HMG20BQ9P0W2 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC17■□□□□ 0.31
HMG20BQ9P0W2 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC17■□□□□ 0.31
HMG20BQ9P0W2 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
HMG20BQ9P0W2 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC17■□□□□ 0.31
HMG20BQ9P0W2 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
HMG20BQ9P0W2 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC17■□□□□ 0.31
HMG20BQ9P0W2 IL23A-201ENST00000228534 1046 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HMG20BQ9P0W2 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HMG20BQ9P0W2 APOA1-202ENST00000359492 932 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
HMG20BQ9P0W2 IGHV3-49-201ENST00000390625 439 ntAPPRIS P1 BASIC17■□□□□ 0.31
HMG20BQ9P0W2 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC17■□□□□ 0.31
HMG20BQ9P0W2 AC092638.2-201ENST00000441105 947 ntBASIC17■□□□□ 0.31
HMG20BQ9P0W2 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC17■□□□□ 0.31
HMG20BQ9P0W2 HINT1-205ENST00000508488 703 ntTSL 2 BASIC17■□□□□ 0.31
HMG20BQ9P0W2 RNA5SP406-201ENST00000516106 112 ntBASIC17■□□□□ 0.31
HMG20BQ9P0W2 IGHV3-37-201ENST00000518544 340 ntBASIC17■□□□□ 0.31
HMG20BQ9P0W2 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC17■□□□□ 0.31
HMG20BQ9P0W2 DBP-202ENST00000593500 712 ntTSL 2 BASIC17■□□□□ 0.31
HMG20BQ9P0W2 HELLS-212ENST00000630929 400 ntTSL 5 BASIC17■□□□□ 0.31
HMG20BQ9P0W2 NIN-202ENST00000324330 4364 ntTSL 5 BASIC17■□□□□ 0.31
HMG20BQ9P0W2 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
HMG20BQ9P0W2 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
HMG20BQ9P0W2 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC17■□□□□ 0.31
HMG20BQ9P0W2 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC17■□□□□ 0.31
HMG20BQ9P0W2 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC17■□□□□ 0.31
HMG20BQ9P0W2 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC17■□□□□ 0.31
HMG20BQ9P0W2 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HMG20BQ9P0W2 CHCHD7-202ENST00000355315 1535 ntTSL 2 BASIC17■□□□□ 0.31
HMG20BQ9P0W2 CICP4-201ENST00000447359 2812 ntBASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 62.8 ms