Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC14.89□□□□□ -0.03
CD248Q9HCU0 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
CD248Q9HCU0 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC14.89□□□□□ -0.03
CD248Q9HCU0 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
CD248Q9HCU0 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
CD248Q9HCU0 AL157813.1-201ENST00000612996 587 ntBASIC14.89□□□□□ -0.03
CD248Q9HCU0 NAP1L6-202ENST00000641404 1222 ntBASIC14.89□□□□□ -0.03
CD248Q9HCU0 GDPD5-215ENST00000533805 2424 ntTSL 2 BASIC14.89□□□□□ -0.03
CD248Q9HCU0 AC144522.1-201ENST00000625111 1658 ntBASIC14.89□□□□□ -0.03
CD248Q9HCU0 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC14.89□□□□□ -0.03
CD248Q9HCU0 COL16A1-202ENST00000373668 3643 ntTSL 2 BASIC14.89□□□□□ -0.03
CD248Q9HCU0 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CD248Q9HCU0 KIAA0930-201ENST00000251993 2723 ntTSL 2 BASIC14.89□□□□□ -0.03
CD248Q9HCU0 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
CD248Q9HCU0 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CD248Q9HCU0 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC14.89□□□□□ -0.03
CD248Q9HCU0 SEMA3F-201ENST00000002829 3802 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
CD248Q9HCU0 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CD248Q9HCU0 DLGAP3-201ENST00000235180 3587 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
CD248Q9HCU0 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CD248Q9HCU0 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CD248Q9HCU0 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC14.89□□□□□ -0.03
CD248Q9HCU0 AC092978.1-202ENST00000637590 1327 ntBASIC14.89□□□□□ -0.03
CD248Q9HCU0 PTCHD3-201ENST00000438700 2529 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CD248Q9HCU0 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CD248Q9HCU0 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
CD248Q9HCU0 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CD248Q9HCU0 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CD248Q9HCU0 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CD248Q9HCU0 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC14.88□□□□□ -0.03
CD248Q9HCU0 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC14.88□□□□□ -0.03
CD248Q9HCU0 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CD248Q9HCU0 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CD248Q9HCU0 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC14.88□□□□□ -0.03
CD248Q9HCU0 MTSS1-201ENST00000325064 2777 ntTSL 2 BASIC14.88□□□□□ -0.03
CD248Q9HCU0 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC14.88□□□□□ -0.03
CD248Q9HCU0 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
CD248Q9HCU0 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CD248Q9HCU0 BAK1-203ENST00000442998 2212 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CD248Q9HCU0 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
CD248Q9HCU0 MEG3-213ENST00000455531 4867 ntTSL 2 BASIC14.88□□□□□ -0.03
CD248Q9HCU0 SLC35A4-203ENST00000612662 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CD248Q9HCU0 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CD248Q9HCU0 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC14.88□□□□□ -0.03
CD248Q9HCU0 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CD248Q9HCU0 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC14.88□□□□□ -0.03
CD248Q9HCU0 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
CD248Q9HCU0 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CD248Q9HCU0 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CD248Q9HCU0 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CD248Q9HCU0 AC239868.1-201ENST00000369385 493 ntBASIC14.88□□□□□ -0.03
CD248Q9HCU0 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC14.88□□□□□ -0.03
CD248Q9HCU0 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CD248Q9HCU0 LBH-202ENST00000401506 485 ntTSL 3 BASIC14.88□□□□□ -0.03
CD248Q9HCU0 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
CD248Q9HCU0 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC14.88□□□□□ -0.03
CD248Q9HCU0 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC14.88□□□□□ -0.03
CD248Q9HCU0 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CD248Q9HCU0 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC14.88□□□□□ -0.03
CD248Q9HCU0 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC14.88□□□□□ -0.03
CD248Q9HCU0 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC14.88□□□□□ -0.03
CD248Q9HCU0 CD22-209ENST00000594250 2107 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CD248Q9HCU0 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
CD248Q9HCU0 AC012044.1-201ENST00000603431 297 ntBASIC14.88□□□□□ -0.03
CD248Q9HCU0 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC14.88□□□□□ -0.03
CD248Q9HCU0 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC14.88□□□□□ -0.03
CD248Q9HCU0 TRMT2B-206ENST00000545398 3106 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
CD248Q9HCU0 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
CD248Q9HCU0 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CD248Q9HCU0 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
CD248Q9HCU0 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CD248Q9HCU0 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC14.88□□□□□ -0.03
CD248Q9HCU0 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CD248Q9HCU0 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CD248Q9HCU0 AC011700.1-201ENST00000610409 2627 ntBASIC14.88□□□□□ -0.03
CD248Q9HCU0 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC14.88□□□□□ -0.03
CD248Q9HCU0 AC006480.2-201ENST00000609770 1337 ntBASIC14.88□□□□□ -0.03
CD248Q9HCU0 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
CD248Q9HCU0 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
CD248Q9HCU0 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC14.88□□□□□ -0.03
CD248Q9HCU0 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CD248Q9HCU0 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CD248Q9HCU0 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CD248Q9HCU0 NTNG1-206ENST00000370071 3149 ntTSL 5 BASIC14.88□□□□□ -0.03
CD248Q9HCU0 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CD248Q9HCU0 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
CD248Q9HCU0 PI4KB-203ENST00000368874 3934 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CD248Q9HCU0 TUBGCP5-208ENST00000620435 3342 ntTSL 2 BASIC14.87□□□□□ -0.03
CD248Q9HCU0 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CD248Q9HCU0 MBP-208ENST00000397866 2145 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CD248Q9HCU0 MARK2-205ENST00000408948 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CD248Q9HCU0 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
CD248Q9HCU0 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC14.87□□□□□ -0.03
CD248Q9HCU0 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CD248Q9HCU0 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC14.87□□□□□ -0.03
CD248Q9HCU0 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC14.87□□□□□ -0.03
CD248Q9HCU0 SF1-209ENST00000433274 2317 ntTSL 2 BASIC14.87□□□□□ -0.03
CD248Q9HCU0 NPNT-211ENST00000506666 2187 ntTSL 2 BASIC14.87□□□□□ -0.03
CD248Q9HCU0 C8B-201ENST00000371237 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CD248Q9HCU0 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC14.87□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms