Protein–RNA interactions for Protein: Q9C0D0

PHACTR1, Phosphatase and actin regulator 1, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR1Q9C0D0 MVP-202ENST00000395353 2925 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
PHACTR1Q9C0D0 LIMS1-205ENST00000410093 1526 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PHACTR1Q9C0D0 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
PHACTR1Q9C0D0 DLX1-201ENST00000341900 2130 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
PHACTR1Q9C0D0 FAM212B-AS1-201ENST00000430373 2131 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
PHACTR1Q9C0D0 NFATC2-207ENST00000610033 2740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
PHACTR1Q9C0D0 RS1-201ENST00000379984 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PHACTR1Q9C0D0 LPCAT1-201ENST00000283415 3966 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PHACTR1Q9C0D0 AC018629.1-201ENST00000623381 1736 ntBASIC14.3□□□□□ -0.12
PHACTR1Q9C0D0 CFAP74-209ENST00000493964 5247 ntAPPRIS P5 TSL 5 BASIC14.3□□□□□ -0.12
PHACTR1Q9C0D0 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
PHACTR1Q9C0D0 AL031595.1-201ENST00000623969 4709 ntBASIC14.3□□□□□ -0.12
PHACTR1Q9C0D0 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
PHACTR1Q9C0D0 PPP3CA-202ENST00000394853 3604 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
PHACTR1Q9C0D0 TBC1D8-AS1-201ENST00000610202 2478 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
PHACTR1Q9C0D0 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
PHACTR1Q9C0D0 SMG6-203ENST00000536871 1865 ntTSL 2 BASIC14.3□□□□□ -0.12
PHACTR1Q9C0D0 RDH12-203ENST00000551171 1879 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PHACTR1Q9C0D0 NUB1-201ENST00000413040 3180 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
PHACTR1Q9C0D0 LBX2-201ENST00000341396 886 ntTSL 3 BASIC14.3□□□□□ -0.12
PHACTR1Q9C0D0 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
PHACTR1Q9C0D0 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC14.3□□□□□ -0.12
PHACTR1Q9C0D0 TMEM14DP-201ENST00000422205 345 ntBASIC14.3□□□□□ -0.12
PHACTR1Q9C0D0 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
PHACTR1Q9C0D0 NME2P1-201ENST00000426182 414 ntBASIC14.3□□□□□ -0.12
PHACTR1Q9C0D0 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
PHACTR1Q9C0D0 CHCHD2P2-201ENST00000503744 321 ntBASIC14.3□□□□□ -0.12
PHACTR1Q9C0D0 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
PHACTR1Q9C0D0 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
PHACTR1Q9C0D0 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC14.3□□□□□ -0.12
PHACTR1Q9C0D0 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC14.3□□□□□ -0.12
PHACTR1Q9C0D0 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC14.3□□□□□ -0.12
PHACTR1Q9C0D0 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC14.3□□□□□ -0.12
PHACTR1Q9C0D0 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
PHACTR1Q9C0D0 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC14.3□□□□□ -0.12
PHACTR1Q9C0D0 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC14.3□□□□□ -0.12
PHACTR1Q9C0D0 AC008687.7-202ENST00000637404 953 ntBASIC14.3□□□□□ -0.12
PHACTR1Q9C0D0 PIK3R3-203ENST00000420542 5174 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PHACTR1Q9C0D0 POU2AF1-201ENST00000393067 3295 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PHACTR1Q9C0D0 FANCC-210ENST00000490972 2709 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
PHACTR1Q9C0D0 GJB5-201ENST00000338513 1355 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PHACTR1Q9C0D0 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
PHACTR1Q9C0D0 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
PHACTR1Q9C0D0 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC14.3□□□□□ -0.12
PHACTR1Q9C0D0 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PHACTR1Q9C0D0 MCF2L-204ENST00000375608 3648 ntTSL 5 BASIC14.3□□□□□ -0.12
PHACTR1Q9C0D0 GAPDHS-201ENST00000222286 1489 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PHACTR1Q9C0D0 AAR2-203ENST00000397286 1466 ntTSL 5 BASIC14.3□□□□□ -0.12
PHACTR1Q9C0D0 USP49-201ENST00000373006 3177 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
PHACTR1Q9C0D0 IFT57-201ENST00000264538 3203 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PHACTR1Q9C0D0 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
PHACTR1Q9C0D0 LRRC32-201ENST00000260061 4207 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PHACTR1Q9C0D0 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
PHACTR1Q9C0D0 RNF43-205ENST00000581868 2610 ntTSL 2 BASIC14.29□□□□□ -0.12
PHACTR1Q9C0D0 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
PHACTR1Q9C0D0 MAP7-201ENST00000354570 4152 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
PHACTR1Q9C0D0 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
PHACTR1Q9C0D0 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PHACTR1Q9C0D0 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC14.29□□□□□ -0.12
PHACTR1Q9C0D0 WASHC5-202ENST00000517845 3667 ntTSL 2 BASIC14.29□□□□□ -0.12
PHACTR1Q9C0D0 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PHACTR1Q9C0D0 NUDT2-203ENST00000379158 1075 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
PHACTR1Q9C0D0 AC011742.3-201ENST00000439053 820 ntBASIC14.29□□□□□ -0.12
PHACTR1Q9C0D0 RPL7P3-201ENST00000441388 714 ntBASIC14.29□□□□□ -0.12
PHACTR1Q9C0D0 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC14.29□□□□□ -0.12
PHACTR1Q9C0D0 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC14.29□□□□□ -0.12
PHACTR1Q9C0D0 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC14.29□□□□□ -0.12
PHACTR1Q9C0D0 AC023310.1-201ENST00000554836 735 ntBASIC14.29□□□□□ -0.12
PHACTR1Q9C0D0 ORC6-206ENST00000568364 888 ntTSL 5 BASIC14.29□□□□□ -0.12
PHACTR1Q9C0D0 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC14.29□□□□□ -0.12
PHACTR1Q9C0D0 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC14.29□□□□□ -0.12
PHACTR1Q9C0D0 IGHV3-72-202ENST00000621503 303 ntBASIC14.29□□□□□ -0.12
PHACTR1Q9C0D0 NCF4-201ENST00000248899 1396 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PHACTR1Q9C0D0 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC14.29□□□□□ -0.12
PHACTR1Q9C0D0 RBM10-202ENST00000345781 3108 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
PHACTR1Q9C0D0 SLC37A3-201ENST00000326232 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PHACTR1Q9C0D0 TLE3-211ENST00000557997 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PHACTR1Q9C0D0 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC14.29□□□□□ -0.12
PHACTR1Q9C0D0 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
PHACTR1Q9C0D0 GDPD5-215ENST00000533805 2424 ntTSL 2 BASIC14.29□□□□□ -0.12
PHACTR1Q9C0D0 PTPN5-205ENST00000477854 2826 ntTSL 5 BASIC14.28□□□□□ -0.12
PHACTR1Q9C0D0 CARHSP1-202ENST00000396593 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PHACTR1Q9C0D0 RC3H2-201ENST00000335387 3081 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
PHACTR1Q9C0D0 COL6A2-203ENST00000397763 3101 ntTSL 5 BASIC14.28□□□□□ -0.12
PHACTR1Q9C0D0 NLRP7-207ENST00000590030 3209 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
PHACTR1Q9C0D0 PELP1-201ENST00000301396 3673 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
PHACTR1Q9C0D0 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
PHACTR1Q9C0D0 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PHACTR1Q9C0D0 TET3-201ENST00000305799 5174 ntTSL 5 BASIC14.28□□□□□ -0.12
PHACTR1Q9C0D0 NPTN-201ENST00000345330 2444 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
PHACTR1Q9C0D0 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC14.28□□□□□ -0.12
PHACTR1Q9C0D0 MAP2K3-203ENST00000361818 2034 ntTSL 5 BASIC14.28□□□□□ -0.12
PHACTR1Q9C0D0 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC14.28□□□□□ -0.12
PHACTR1Q9C0D0 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PHACTR1Q9C0D0 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC14.28□□□□□ -0.12
PHACTR1Q9C0D0 YWHAQ-202ENST00000381844 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PHACTR1Q9C0D0 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PHACTR1Q9C0D0 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PHACTR1Q9C0D0 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC14.28□□□□□ -0.12
PHACTR1Q9C0D0 LINC01114-202ENST00000424321 2112 ntTSL 2 BASIC14.28□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms