Protein–RNA interactions for Protein: Q9BQI6

SLF1, SMC5-SMC6 complex localization factor protein 1, humanhuman

Predictions only

Length 1,058 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLF1Q9BQI6 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
SLF1Q9BQI6 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC16.31■□□□□ 0.2
SLF1Q9BQI6 DUT-208ENST00000559540 1441 ntTSL 2 BASIC16.31■□□□□ 0.2
SLF1Q9BQI6 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
SLF1Q9BQI6 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
SLF1Q9BQI6 PON3-201ENST00000265627 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SLF1Q9BQI6 CXCL12-205ENST00000395794 1052 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SLF1Q9BQI6 PPM1N-201ENST00000396735 895 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SLF1Q9BQI6 LIF-202ENST00000403987 592 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SLF1Q9BQI6 LY6G6E-227ENST00000409239 776 ntAPPRIS ALT2 TSL 4 BASIC16.31■□□□□ 0.2
SLF1Q9BQI6 NUPL2-202ENST00000410002 680 ntTSL 2 BASIC16.31■□□□□ 0.2
SLF1Q9BQI6 LINC01868-201ENST00000414965 562 ntTSL 4 BASIC16.31■□□□□ 0.2
SLF1Q9BQI6 FLJ37035-201ENST00000419400 446 ntTSL 3 BASIC16.31■□□□□ 0.2
SLF1Q9BQI6 VEGFB-202ENST00000426086 979 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SLF1Q9BQI6 AL008733.1-201ENST00000440516 469 ntTSL 3 BASIC16.31■□□□□ 0.2
SLF1Q9BQI6 RPL35P9-201ENST00000446059 350 ntBASIC16.31■□□□□ 0.2
SLF1Q9BQI6 PPM1N-208ENST00000456399 618 ntTSL 3 BASIC16.31■□□□□ 0.2
SLF1Q9BQI6 LINC00634-202ENST00000505157 222 ntBASIC16.31■□□□□ 0.2
SLF1Q9BQI6 TMEM202-AS1-201ENST00000562573 723 ntTSL 3 BASIC16.31■□□□□ 0.2
SLF1Q9BQI6 NPTN-204ENST00000562924 1094 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SLF1Q9BQI6 AC011444.1-201ENST00000587836 639 ntTSL 3 BASIC16.31■□□□□ 0.2
SLF1Q9BQI6 AC023421.2-201ENST00000589510 313 ntTSL 5 BASIC16.31■□□□□ 0.2
SLF1Q9BQI6 HPX-213ENST00000615166 826 ntTSL 5 BASIC16.31■□□□□ 0.2
SLF1Q9BQI6 AC114296.1-204ENST00000637197 1173 ntAPPRIS P5 TSL 5 BASIC16.31■□□□□ 0.2
SLF1Q9BQI6 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
SLF1Q9BQI6 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SLF1Q9BQI6 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SLF1Q9BQI6 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SLF1Q9BQI6 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SLF1Q9BQI6 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC16.31■□□□□ 0.2
SLF1Q9BQI6 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC16.31■□□□□ 0.2
SLF1Q9BQI6 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
SLF1Q9BQI6 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC16.31■□□□□ 0.2
SLF1Q9BQI6 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SLF1Q9BQI6 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
SLF1Q9BQI6 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SLF1Q9BQI6 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC16.31■□□□□ 0.2
SLF1Q9BQI6 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
SLF1Q9BQI6 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC16.31■□□□□ 0.2
SLF1Q9BQI6 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC16.31■□□□□ 0.2
SLF1Q9BQI6 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SLF1Q9BQI6 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC16.3■□□□□ 0.2
SLF1Q9BQI6 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SLF1Q9BQI6 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SLF1Q9BQI6 IQCJ-201ENST00000397832 1460 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
SLF1Q9BQI6 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
SLF1Q9BQI6 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SLF1Q9BQI6 SRC-202ENST00000373558 4304 ntTSL 5 BASIC16.3■□□□□ 0.2
SLF1Q9BQI6 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SLF1Q9BQI6 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
SLF1Q9BQI6 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SLF1Q9BQI6 RHOG-201ENST00000351018 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SLF1Q9BQI6 TUBB8P4-201ENST00000511806 1324 ntBASIC16.3■□□□□ 0.2
SLF1Q9BQI6 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SLF1Q9BQI6 POLR2L-201ENST00000322028 892 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SLF1Q9BQI6 HNRNPA1-201ENST00000330752 1294 ntTSL 5 BASIC16.3■□□□□ 0.2
SLF1Q9BQI6 MAGOH-202ENST00000371470 756 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SLF1Q9BQI6 IGHV1-3-201ENST00000390595 395 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
SLF1Q9BQI6 CHTF8-202ENST00000398235 1073 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
SLF1Q9BQI6 AL390778.2-201ENST00000420883 886 ntTSL 3 BASIC16.3■□□□□ 0.2
SLF1Q9BQI6 APOPT1-209ENST00000492189 513 ntTSL 3 BASIC16.3■□□□□ 0.2
SLF1Q9BQI6 ALG1L6P-201ENST00000515248 758 ntBASIC16.3■□□□□ 0.2
SLF1Q9BQI6 AC011921.1-201ENST00000559739 557 ntTSL 4 BASIC16.3■□□□□ 0.2
SLF1Q9BQI6 AL359091.4-201ENST00000610052 409 ntBASIC16.3■□□□□ 0.2
SLF1Q9BQI6 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC16.3■□□□□ 0.2
SLF1Q9BQI6 ST5-261ENST00000626808 1071 ntTSL 5 BASIC16.3■□□□□ 0.2
SLF1Q9BQI6 C1orf232-202ENST00000635463 466 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
SLF1Q9BQI6 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC16.3■□□□□ 0.2
SLF1Q9BQI6 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
SLF1Q9BQI6 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SLF1Q9BQI6 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SLF1Q9BQI6 AC107918.4-201ENST00000641966 3141 ntBASIC16.3■□□□□ 0.2
SLF1Q9BQI6 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SLF1Q9BQI6 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
SLF1Q9BQI6 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SLF1Q9BQI6 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SLF1Q9BQI6 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
SLF1Q9BQI6 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
SLF1Q9BQI6 NCF4-202ENST00000397147 1641 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SLF1Q9BQI6 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SLF1Q9BQI6 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC16.3■□□□□ 0.2
SLF1Q9BQI6 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC16.29■□□□□ 0.2
SLF1Q9BQI6 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
SLF1Q9BQI6 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC16.29■□□□□ 0.2
SLF1Q9BQI6 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SLF1Q9BQI6 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLF1Q9BQI6 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC16.29■□□□□ 0.2
SLF1Q9BQI6 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC16.29■□□□□ 0.2
SLF1Q9BQI6 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
SLF1Q9BQI6 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLF1Q9BQI6 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SLF1Q9BQI6 CEP250-201ENST00000397524 1419 ntTSL 5 BASIC16.29■□□□□ 0.2
SLF1Q9BQI6 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
SLF1Q9BQI6 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
SLF1Q9BQI6 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLF1Q9BQI6 MSANTD2P1-201ENST00000445341 1368 ntBASIC16.29■□□□□ 0.2
SLF1Q9BQI6 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLF1Q9BQI6 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLF1Q9BQI6 PDXDC2P-206ENST00000534700 1315 ntBASIC16.29■□□□□ 0.2
SLF1Q9BQI6 TSPAN3-205ENST00000558745 1340 ntTSL 5 BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 85.6 ms