Protein–RNA interactions for Protein: Q99504

EYA3, Eyes absent homolog 3, humanhuman

Predictions only

Length 573 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EYA3Q99504 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
EYA3Q99504 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
EYA3Q99504 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
EYA3Q99504 SUMO4-201ENST00000326669 1066 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
EYA3Q99504 CRHR1-205ENST00000352855 1146 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
EYA3Q99504 AC106827.1-201ENST00000366454 431 ntBASIC16.85■□□□□ 0.29
EYA3Q99504 HLA-DMA-202ENST00000395303 1007 ntBASIC16.85■□□□□ 0.29
EYA3Q99504 HNRNPA1P21-201ENST00000424115 961 ntBASIC16.85■□□□□ 0.29
EYA3Q99504 AC007279.1-201ENST00000448547 837 ntBASIC16.85■□□□□ 0.29
EYA3Q99504 AC117945.1-201ENST00000451375 463 ntTSL 3 BASIC16.85■□□□□ 0.29
EYA3Q99504 AC092612.1-201ENST00000514501 998 ntBASIC16.85■□□□□ 0.29
EYA3Q99504 AP003351.1-201ENST00000522743 668 ntTSL 3 BASIC16.85■□□□□ 0.29
EYA3Q99504 RMDN1-218ENST00000523911 950 ntTSL 2 BASIC16.85■□□□□ 0.29
EYA3Q99504 AC079949.1-201ENST00000541419 505 ntTSL 3 BASIC16.85■□□□□ 0.29
EYA3Q99504 Metazoa_SRP.128-201ENST00000620543 314 ntBASIC16.85■□□□□ 0.29
EYA3Q99504 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
EYA3Q99504 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
EYA3Q99504 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
EYA3Q99504 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
EYA3Q99504 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
EYA3Q99504 CNMD-203ENST00000448904 1444 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
EYA3Q99504 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
EYA3Q99504 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
EYA3Q99504 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC16.85■□□□□ 0.29
EYA3Q99504 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
EYA3Q99504 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
EYA3Q99504 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
EYA3Q99504 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
EYA3Q99504 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
EYA3Q99504 PHTF2-204ENST00000415251 1738 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
EYA3Q99504 KCTD6-205ENST00000490264 1759 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
EYA3Q99504 HEXA-206ENST00000566304 1795 ntTSL 2 BASIC16.84■□□□□ 0.29
EYA3Q99504 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
EYA3Q99504 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC16.84■□□□□ 0.29
EYA3Q99504 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
EYA3Q99504 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC16.84■□□□□ 0.29
EYA3Q99504 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
EYA3Q99504 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
EYA3Q99504 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
EYA3Q99504 C17orf80-202ENST00000268942 3449 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
EYA3Q99504 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
EYA3Q99504 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
EYA3Q99504 SFMBT2-202ENST00000379711 692 ntTSL 5 BASIC16.84■□□□□ 0.29
EYA3Q99504 MPV17-207ENST00000403262 665 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
EYA3Q99504 LINC01983-201ENST00000413586 574 ntTSL 2 BASIC16.84■□□□□ 0.29
EYA3Q99504 AC103563.1-201ENST00000429316 123 ntBASIC16.84■□□□□ 0.29
EYA3Q99504 CDCA4P4-201ENST00000435216 680 ntBASIC16.84■□□□□ 0.29
EYA3Q99504 AC015818.1-201ENST00000451011 244 ntBASIC16.84■□□□□ 0.29
EYA3Q99504 EXTL3-AS1-203ENST00000520023 780 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
EYA3Q99504 PRSS55-203ENST00000522210 1005 ntTSL 2 BASIC16.84■□□□□ 0.29
EYA3Q99504 AF111169.2-201ENST00000553758 721 ntTSL 3 BASIC16.84■□□□□ 0.29
EYA3Q99504 AL139316.1-201ENST00000555643 568 ntTSL 3 BASIC16.84■□□□□ 0.29
EYA3Q99504 ANAPC11-221ENST00000584314 559 ntTSL 2 BASIC16.84■□□□□ 0.29
EYA3Q99504 AC026120.2-201ENST00000617239 309 ntBASIC16.84■□□□□ 0.29
EYA3Q99504 MECP2-213ENST00000622433 1071 ntTSL 5 BASIC16.84■□□□□ 0.29
EYA3Q99504 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC16.84■□□□□ 0.29
EYA3Q99504 AC020931.1-201ENST00000589622 1346 ntBASIC16.84■□□□□ 0.29
EYA3Q99504 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
EYA3Q99504 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC16.84■□□□□ 0.29
EYA3Q99504 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
EYA3Q99504 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC16.84■□□□□ 0.29
EYA3Q99504 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
EYA3Q99504 LHFPL1-201ENST00000371968 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
EYA3Q99504 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC16.84■□□□□ 0.29
EYA3Q99504 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
EYA3Q99504 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC16.84■□□□□ 0.29
EYA3Q99504 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
EYA3Q99504 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC16.84■□□□□ 0.29
EYA3Q99504 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
EYA3Q99504 AL513477.1-201ENST00000602865 2407 ntBASIC16.84■□□□□ 0.29
EYA3Q99504 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
EYA3Q99504 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
EYA3Q99504 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC16.83■□□□□ 0.29
EYA3Q99504 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
EYA3Q99504 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
EYA3Q99504 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
EYA3Q99504 TNNT1-202ENST00000356783 934 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
EYA3Q99504 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
EYA3Q99504 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
EYA3Q99504 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
EYA3Q99504 FGGY-204ENST00000371218 2052 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
EYA3Q99504 POLR1C-203ENST00000372389 1355 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
EYA3Q99504 AL137244.1-201ENST00000422931 865 ntBASIC16.83■□□□□ 0.28
EYA3Q99504 AL355482.2-201ENST00000428646 1145 ntTSL 2 BASIC16.83■□□□□ 0.28
EYA3Q99504 RPL15-208ENST00000435882 1063 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
EYA3Q99504 ERP29-202ENST00000455836 1333 ntTSL 2 BASIC16.83■□□□□ 0.28
EYA3Q99504 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
EYA3Q99504 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
EYA3Q99504 C11orf58-207ENST00000525684 575 ntTSL 2 BASIC16.83■□□□□ 0.28
EYA3Q99504 C11orf58-209ENST00000528634 776 ntTSL 5 BASIC16.83■□□□□ 0.28
EYA3Q99504 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC16.83■□□□□ 0.28
EYA3Q99504 DAO-208ENST00000551281 1345 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
EYA3Q99504 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC16.83■□□□□ 0.28
EYA3Q99504 AC009055.1-201ENST00000562656 781 ntTSL 3 BASIC16.83■□□□□ 0.28
EYA3Q99504 MIAT_exon5_3.1-201ENST00000613656 377 ntBASIC16.83■□□□□ 0.28
EYA3Q99504 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC16.83■□□□□ 0.28
EYA3Q99504 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC16.83■□□□□ 0.28
EYA3Q99504 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC16.83■□□□□ 0.28
EYA3Q99504 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
EYA3Q99504 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms