Protein–RNA interactions for Protein: Q8TC41

RNF217, Probable E3 ubiquitin-protein ligase RNF217, humanhuman

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF217Q8TC41 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
RNF217Q8TC41 ARID4A-202ENST00000355431 5891 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RNF217Q8TC41 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
RNF217Q8TC41 GPC4-201ENST00000370828 4960 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RNF217Q8TC41 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
RNF217Q8TC41 COL8A1-202ENST00000273342 3029 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
RNF217Q8TC41 TSC22D1-203ENST00000458659 4820 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
RNF217Q8TC41 NUMB-212ENST00000554546 3607 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RNF217Q8TC41 TMEM56-201ENST00000370203 6822 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RNF217Q8TC41 FUT8-204ENST00000394586 3559 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RNF217Q8TC41 RAPGEF4-AS1-202ENST00000435328 4625 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
RNF217Q8TC41 SALL4P5-201ENST00000419001 1760 ntBASIC13.73□□□□□ -0.21
RNF217Q8TC41 RIMS1-201ENST00000264839 7055 ntTSL 5 BASIC13.73□□□□□ -0.21
RNF217Q8TC41 LINC01024-201ENST00000499203 2769 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
RNF217Q8TC41 TRIM40-207ENST00000396581 2086 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
RNF217Q8TC41 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
RNF217Q8TC41 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC13.73□□□□□ -0.21
RNF217Q8TC41 AL391825.1-201ENST00000457671 1364 ntBASIC13.73□□□□□ -0.21
RNF217Q8TC41 NADK-202ENST00000341991 3098 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
RNF217Q8TC41 EPB42-202ENST00000441366 2374 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RNF217Q8TC41 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC13.73□□□□□ -0.21
RNF217Q8TC41 FOXK1-201ENST00000328914 11181 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
RNF217Q8TC41 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
RNF217Q8TC41 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
RNF217Q8TC41 ABCA2-202ENST00000341511 8063 ntAPPRIS P2 TSL 5 BASIC13.73□□□□□ -0.21
RNF217Q8TC41 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RNF217Q8TC41 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RNF217Q8TC41 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
RNF217Q8TC41 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC13.73□□□□□ -0.21
RNF217Q8TC41 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
RNF217Q8TC41 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC13.73□□□□□ -0.21
RNF217Q8TC41 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC13.73□□□□□ -0.21
RNF217Q8TC41 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
RNF217Q8TC41 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC13.73□□□□□ -0.21
RNF217Q8TC41 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC13.73□□□□□ -0.21
RNF217Q8TC41 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC13.73□□□□□ -0.21
RNF217Q8TC41 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC13.73□□□□□ -0.21
RNF217Q8TC41 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC13.73□□□□□ -0.21
RNF217Q8TC41 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC13.73□□□□□ -0.21
RNF217Q8TC41 AC124283.3-201ENST00000570869 594 ntBASIC13.73□□□□□ -0.21
RNF217Q8TC41 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC13.73□□□□□ -0.21
RNF217Q8TC41 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
RNF217Q8TC41 LINC02560-201ENST00000596379 459 ntBASIC13.73□□□□□ -0.21
RNF217Q8TC41 AC008494.3-201ENST00000606615 944 ntBASIC13.73□□□□□ -0.21
RNF217Q8TC41 CU634019.7-201ENST00000624153 1185 ntBASIC13.73□□□□□ -0.21
RNF217Q8TC41 FP236241.2-201ENST00000624906 1185 ntBASIC13.73□□□□□ -0.21
RNF217Q8TC41 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
RNF217Q8TC41 CNOT4-203ENST00000361528 2215 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
RNF217Q8TC41 CMIP-202ENST00000537098 4357 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RNF217Q8TC41 POLD1-210ENST00000599857 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RNF217Q8TC41 BRAP-202ENST00000419234 4026 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RNF217Q8TC41 MCM7-213ENST00000621318 3084 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
RNF217Q8TC41 MYT1-201ENST00000328439 5535 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
RNF217Q8TC41 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RNF217Q8TC41 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RNF217Q8TC41 HNRNPH1-216ENST00000510411 2105 ntTSL 5 BASIC13.73□□□□□ -0.21
RNF217Q8TC41 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
RNF217Q8TC41 TECTB-201ENST00000369422 2713 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RNF217Q8TC41 OTOA-203ENST00000388957 2703 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
RNF217Q8TC41 POLG-202ENST00000442287 4487 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RNF217Q8TC41 ZMYM5-201ENST00000337963 3268 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
RNF217Q8TC41 AC008609.1-202ENST00000501818 2686 ntTSL 2 BASIC13.73□□□□□ -0.21
RNF217Q8TC41 TK2-206ENST00000527800 2687 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
RNF217Q8TC41 ALDH8A1-203ENST00000367845 2383 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
RNF217Q8TC41 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC13.73□□□□□ -0.21
RNF217Q8TC41 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC13.73□□□□□ -0.21
RNF217Q8TC41 LINC00365-201ENST00000413591 2618 ntTSL 3 BASIC13.73□□□□□ -0.21
RNF217Q8TC41 DNAL1-201ENST00000311089 2312 ntTSL 2 BASIC13.73□□□□□ -0.21
RNF217Q8TC41 SCNN1B-202ENST00000343070 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RNF217Q8TC41 CCDC18-203ENST00000401026 4552 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
RNF217Q8TC41 PARP10-205ENST00000525773 3404 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
RNF217Q8TC41 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC13.73□□□□□ -0.21
RNF217Q8TC41 SLC44A3-AS1-215ENST00000634870 5956 ntTSL 5 BASIC13.73□□□□□ -0.21
RNF217Q8TC41 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
RNF217Q8TC41 ASB2-203ENST00000555019 2842 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RNF217Q8TC41 MX1-218ENST00000619682 1980 ntTSL 5 BASIC13.72□□□□□ -0.21
RNF217Q8TC41 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC13.72□□□□□ -0.21
RNF217Q8TC41 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
RNF217Q8TC41 ARSD-202ENST00000381154 5159 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RNF217Q8TC41 TF-201ENST00000402696 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RNF217Q8TC41 CTCFL-204ENST00000422869 2966 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
RNF217Q8TC41 KCNS2-202ENST00000521839 4340 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
RNF217Q8TC41 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
RNF217Q8TC41 FBN3-207ENST00000601739 9086 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RNF217Q8TC41 FHOD1-201ENST00000258201 3990 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RNF217Q8TC41 DLGAP1-203ENST00000400147 5258 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
RNF217Q8TC41 DLGAP1-206ENST00000400155 5257 ntTSL 2 BASIC13.72□□□□□ -0.21
RNF217Q8TC41 UBN1-202ENST00000396658 6336 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RNF217Q8TC41 ATG7-201ENST00000354449 4959 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RNF217Q8TC41 MCFD2-212ENST00000444761 4169 ntTSL 2 BASIC13.72□□□□□ -0.21
RNF217Q8TC41 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RNF217Q8TC41 XIRP1-203ENST00000421646 2596 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
RNF217Q8TC41 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC13.72□□□□□ -0.21
RNF217Q8TC41 METTL13-201ENST00000361735 3327 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RNF217Q8TC41 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
RNF217Q8TC41 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
RNF217Q8TC41 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC13.72□□□□□ -0.21
RNF217Q8TC41 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC13.72□□□□□ -0.21
RNF217Q8TC41 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC13.72□□□□□ -0.21
RNF217Q8TC41 MLF1-209ENST00000482628 1050 ntTSL 5 BASIC13.72□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms