Protein–RNA interactions for Protein: Q8NHG7

SVIP, Small VCP/p97-interacting protein, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SVIPQ8NHG7 CD9-201ENST00000009180 1169 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
SVIPQ8NHG7 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC8.29□□□□□ -1.08
SVIPQ8NHG7 EIF3I-202ENST00000373586 1458 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
SVIPQ8NHG7 FAM227B-212ENST00000561064 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
SVIPQ8NHG7 AF131216.4-201ENST00000638924 1588 ntBASIC8.29□□□□□ -1.08
SVIPQ8NHG7 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC8.29□□□□□ -1.08
SVIPQ8NHG7 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
SVIPQ8NHG7 LRRFIP2-203ENST00000396428 1791 ntTSL 2 BASIC8.29□□□□□ -1.08
SVIPQ8NHG7 PDE9A-211ENST00000398232 1885 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
SVIPQ8NHG7 SCNN1B-208ENST00000568923 1852 ntTSL 3 BASIC8.29□□□□□ -1.08
SVIPQ8NHG7 LUC7L2-201ENST00000263545 2287 ntTSL 5 BASIC8.29□□□□□ -1.08
SVIPQ8NHG7 PPT1-203ENST00000433473 2267 ntAPPRIS ALT1 TSL 1 (best) BASIC8.29□□□□□ -1.08
SVIPQ8NHG7 AC097662.1-201ENST00000439598 2568 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
SVIPQ8NHG7 SRC-201ENST00000358208 3851 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
SVIPQ8NHG7 MEGF10-201ENST00000274473 7594 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
SVIPQ8NHG7 ARID1B-210ENST00000635849 5830 ntAPPRIS ALT2 TSL 5 BASIC8.29□□□□□ -1.08
SVIPQ8NHG7 CD163L1-201ENST00000313599 4615 ntAPPRIS P3 TSL 1 (best) BASIC8.29□□□□□ -1.08
SVIPQ8NHG7 SFXN5-201ENST00000272433 4140 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
SVIPQ8NHG7 CCR1-201ENST00000296140 2731 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
SVIPQ8NHG7 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
SVIPQ8NHG7 LINC01209-201ENST00000451289 2400 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
SVIPQ8NHG7 B3GALT5-204ENST00000398714 2341 ntTSL 5 BASIC8.29□□□□□ -1.08
SVIPQ8NHG7 AC008498.2-201ENST00000624033 2322 ntBASIC8.29□□□□□ -1.08
SVIPQ8NHG7 STAG3L4-202ENST00000416602 2143 ntTSL 2 BASIC8.29□□□□□ -1.08
SVIPQ8NHG7 KIZ-213ENST00000620891 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
SVIPQ8NHG7 AC067931.2-201ENST00000623655 2003 ntBASIC8.29□□□□□ -1.08
SVIPQ8NHG7 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC8.29□□□□□ -1.08
SVIPQ8NHG7 DNAJC6-202ENST00000371069 5365 ntAPPRIS P4 TSL 1 (best) BASIC8.29□□□□□ -1.08
SVIPQ8NHG7 ASPH-203ENST00000379454 5268 ntAPPRIS P3 TSL 1 (best) BASIC8.29□□□□□ -1.08
SVIPQ8NHG7 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
SVIPQ8NHG7 NAV2-213ENST00000533917 5084 ntTSL 2 BASIC8.29□□□□□ -1.08
SVIPQ8NHG7 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
SVIPQ8NHG7 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
SVIPQ8NHG7 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
SVIPQ8NHG7 RBM4-206ENST00000483858 1548 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
SVIPQ8NHG7 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC8.29□□□□□ -1.08
SVIPQ8NHG7 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC8.29□□□□□ -1.08
SVIPQ8NHG7 SLC30A9-201ENST00000264451 6218 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
SVIPQ8NHG7 FGFR1OP2-202ENST00000327214 2790 ntAPPRIS P1 TSL 2 BASIC8.28□□□□□ -1.08
SVIPQ8NHG7 LINC02338-201ENST00000615202 2753 ntTSL 2 BASIC8.28□□□□□ -1.08
SVIPQ8NHG7 FAM19A2-201ENST00000416284 4128 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
SVIPQ8NHG7 GIMAP5-201ENST00000358647 2291 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
SVIPQ8NHG7 CACNB4-206ENST00000439467 2159 ntTSL 5 BASIC8.28□□□□□ -1.08
SVIPQ8NHG7 AL512662.2-201ENST00000453174 1963 ntTSL 2 BASIC8.28□□□□□ -1.08
SVIPQ8NHG7 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC8.28□□□□□ -1.08
SVIPQ8NHG7 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
SVIPQ8NHG7 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
SVIPQ8NHG7 CLTCL1-202ENST00000427926 5513 ntAPPRIS P3 TSL 1 (best) BASIC8.28□□□□□ -1.08
SVIPQ8NHG7 KLLN-201ENST00000445946 4277 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
SVIPQ8NHG7 AL109918.1-201ENST00000602367 3039 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
SVIPQ8NHG7 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
SVIPQ8NHG7 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
SVIPQ8NHG7 CLP1-203ENST00000529430 1778 ntTSL 5 BASIC8.28□□□□□ -1.08
SVIPQ8NHG7 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC8.28□□□□□ -1.08
SVIPQ8NHG7 EARS2-201ENST00000449606 3961 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
SVIPQ8NHG7 PAK6-201ENST00000260404 3865 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
SVIPQ8NHG7 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
SVIPQ8NHG7 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
SVIPQ8NHG7 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC8.28□□□□□ -1.08
SVIPQ8NHG7 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC8.28□□□□□ -1.08
SVIPQ8NHG7 ITGA10-201ENST00000369304 5269 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
SVIPQ8NHG7 TET1P1-201ENST00000426627 2301 ntBASIC8.28□□□□□ -1.08
SVIPQ8NHG7 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC8.28□□□□□ -1.08
SVIPQ8NHG7 KIF2C-201ENST00000372217 2955 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
SVIPQ8NHG7 APTX-204ENST00000379817 2106 ntAPPRIS ALT2 TSL 1 (best) BASIC8.28□□□□□ -1.08
SVIPQ8NHG7 AL391822.1-201ENST00000452580 562 ntBASIC8.28□□□□□ -1.08
SVIPQ8NHG7 AP000926.3-201ENST00000497201 299 ntBASIC8.28□□□□□ -1.08
SVIPQ8NHG7 HNRNPA1P12-201ENST00000515379 961 ntBASIC8.28□□□□□ -1.08
SVIPQ8NHG7 AZIN1-AS1-211ENST00000520455 480 ntTSL 3 BASIC8.28□□□□□ -1.08
SVIPQ8NHG7 STX17-AS1-201ENST00000529965 548 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
SVIPQ8NHG7 LINC02457-201ENST00000552992 596 ntTSL 4 BASIC8.28□□□□□ -1.08
SVIPQ8NHG7 LINC00907-207ENST00000591381 1291 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
SVIPQ8NHG7 AC099777.1-201ENST00000603779 1070 ntBASIC8.28□□□□□ -1.08
SVIPQ8NHG7 AC008626.1-201ENST00000604384 255 ntBASIC8.28□□□□□ -1.08
SVIPQ8NHG7 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC8.28□□□□□ -1.08
SVIPQ8NHG7 Metazoa_SRP.174-201ENST00000619127 283 ntBASIC8.28□□□□□ -1.08
SVIPQ8NHG7 DEF8-201ENST00000268676 3725 ntTSL 2 BASIC8.28□□□□□ -1.08
SVIPQ8NHG7 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
SVIPQ8NHG7 TFIP11-202ENST00000407148 2789 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
SVIPQ8NHG7 NAT10-205ENST00000531159 3436 ntAPPRIS ALT2 TSL 2 BASIC8.28□□□□□ -1.08
SVIPQ8NHG7 BTN2A3P-204ENST00000466808 2559 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
SVIPQ8NHG7 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
SVIPQ8NHG7 CACNA2D4-202ENST00000382722 5475 ntAPPRIS P2 TSL 1 (best) BASIC8.28□□□□□ -1.08
SVIPQ8NHG7 NEK4-207ENST00000535191 2452 ntTSL 2 BASIC8.28□□□□□ -1.08
SVIPQ8NHG7 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC8.28□□□□□ -1.08
SVIPQ8NHG7 PTPN7-201ENST00000309017 3765 ntAPPRIS P4 TSL 1 (best) BASIC8.28□□□□□ -1.08
SVIPQ8NHG7 UTY-201ENST00000329134 4325 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
SVIPQ8NHG7 TRAF3IP2-202ENST00000359831 2264 ntAPPRIS ALT1 TSL 2 BASIC8.28□□□□□ -1.08
SVIPQ8NHG7 GPN1-210ENST00000515877 1646 ntTSL 5 BASIC8.28□□□□□ -1.08
SVIPQ8NHG7 EI24-204ENST00000527235 1625 ntTSL 5 BASIC8.28□□□□□ -1.08
SVIPQ8NHG7 AP001180.1-201ENST00000562202 3566 ntTSL 2 BASIC8.28□□□□□ -1.08
SVIPQ8NHG7 EAF1-201ENST00000396842 4690 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
SVIPQ8NHG7 TMPRSS4-AS1-204ENST00000636151 3397 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
SVIPQ8NHG7 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
SVIPQ8NHG7 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
SVIPQ8NHG7 CTAGE14P-201ENST00000397819 2403 ntBASIC8.28□□□□□ -1.08
SVIPQ8NHG7 MRAS-201ENST00000289104 4538 ntAPPRIS P1 TSL 2 BASIC8.28□□□□□ -1.08
SVIPQ8NHG7 AC026765.2-201ENST00000551875 1330 ntTSL 2 BASIC8.28□□□□□ -1.08
SVIPQ8NHG7 ODF2-201ENST00000351030 3899 ntAPPRIS ALT1 TSL 2 BASIC8.28□□□□□ -1.08
SVIPQ8NHG7 MAPK10-280ENST00000641166 2684 ntAPPRIS ALT1 BASIC8.27□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 58.4 ms