RNA–Protein interactions for RNA: ENST00000449606.5

EARS2-201, Transcript of glutamyl-tRNA synthetase 2, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EARS2, Length 3,961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EARS2-201ENST00000449606 NISCHQ9Y2I1 1504 aa20.95■□□□□ 0.94
EARS2-201ENST00000449606 SHROOM4Q9ULL8 1493 aa18.3■□□□□ 0.52
EARS2-201ENST00000449606 SUPT5HO00267 1087 aaKnown RBP18.05■□□□□ 0.48
EARS2-201ENST00000449606 DCAF8L2P0C7V8 631 aa17.97■□□□□ 0.47
EARS2-201ENST00000449606 ZCCHC6Q5VYS8 1495 aaKnown RBP17.68■□□□□ 0.42
EARS2-201ENST00000449606 CCDC180Q9P1Z9 1646 aa17.6■□□□□ 0.41
EARS2-201ENST00000449606 CHIC1Q5VXU3 224 aa17.36■□□□□ 0.37
EARS2-201ENST00000449606 MYO15BQ96JP2 1530 aa17.14■□□□□ 0.33
EARS2-201ENST00000449606 PCGF6Q9BYE7 350 aa17.07■□□□□ 0.32
EARS2-201ENST00000449606 DCAF1Q9Y4B6 1507 aa17.04■□□□□ 0.32
EARS2-201ENST00000449606 LOC105371045A0A1W2PR82 267 aa16.96■□□□□ 0.31
EARS2-201ENST00000449606 HRCP23327 699 aa16.96■□□□□ 0.3
EARS2-201ENST00000449606 SCRIBQ14160 1630 aa16.77■□□□□ 0.28
EARS2-201ENST00000449606 TRIM41Q8WV44 630 aa16.76■□□□□ 0.27
EARS2-201ENST00000449606 FAM9AQ8IZU1 332 aaPredicted RBP16.74■□□□□ 0.27
EARS2-201ENST00000449606 ABCC9O60706 1549 aa16.74■□□□□ 0.27
EARS2-201ENST00000449606 EHMT2Q96KQ7 1210 aa16.71■□□□□ 0.27
EARS2-201ENST00000449606 PPARGC1BQ86YN6 1023 aaKnown RBP16.68■□□□□ 0.26
EARS2-201ENST00000449606 RSF1Q96T23 1441 aaPredicted RBP16.67■□□□□ 0.26
EARS2-201ENST00000449606 TRIM26Q12899 539 aaPredicted RBP16.62■□□□□ 0.25
EARS2-201ENST00000449606 RB1CC1Q8TDY2 1594 aa16.45■□□□□ 0.22
EARS2-201ENST00000449606 CECR2Q9BXF3 1484 aa16.42■□□□□ 0.22
EARS2-201ENST00000449606 NACADO15069 1562 aa16.4■□□□□ 0.22
EARS2-201ENST00000449606 MROH2BQ7Z745 1585 aa16.32■□□□□ 0.2
EARS2-201ENST00000449606 ZEB1P37275 1124 aaPredicted RBP16.32■□□□□ 0.2
EARS2-201ENST00000449606 PABPN1Q86U42 306 aaKnown RBP eCLIP16.2■□□□□ 0.18
EARS2-201ENST00000449606 WIZO95785 1651 aa16.2■□□□□ 0.18
EARS2-201ENST00000449606 TTBK1Q5TCY1 1321 aaPredicted RBP16.17■□□□□ 0.18
EARS2-201ENST00000449606 BAZ1AQ9NRL2 1556 aaPredicted RBP16.11■□□□□ 0.17
EARS2-201ENST00000449606 CCER1Q8TC90 406 aaPredicted RBP16.07■□□□□ 0.16
EARS2-201ENST00000449606 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.04■□□□□ 0.16
EARS2-201ENST00000449606 UBTFP17480 764 aaKnown RBP16.04■□□□□ 0.16
EARS2-201ENST00000449606 CCDC88BA6NC98 1476 aa15.96■□□□□ 0.15
EARS2-201ENST00000449606 ABCC8Q09428 1581 aa15.96■□□□□ 0.14
EARS2-201ENST00000449606 TOP2AP11388 1531 aaKnown RBP15.94■□□□□ 0.14
EARS2-201ENST00000449606 CSRNP3Q8WYN3 585 aa15.91■□□□□ 0.14
EARS2-201ENST00000449606 SMARCA4P51532 1647 aa15.91■□□□□ 0.14
EARS2-201ENST00000449606 SOGA1O94964 1423 aa15.88■□□□□ 0.13
EARS2-201ENST00000449606 PELP1Q8IZL8 1130 aaKnown RBP15.86■□□□□ 0.13
EARS2-201ENST00000449606 CEP162Q5TB80 1403 aa15.85■□□□□ 0.13
EARS2-201ENST00000449606 SMARCA2P51531 1590 aa15.83■□□□□ 0.13
EARS2-201ENST00000449606 RANGAP1P46060 587 aaPredicted RBP15.83■□□□□ 0.12
EARS2-201ENST00000449606 EIF4G1Q04637 1599 aaKnown RBP15.8■□□□□ 0.12
EARS2-201ENST00000449606 TNIKQ9UKE5 1360 aa15.79■□□□□ 0.12
EARS2-201ENST00000449606 APLP2Q06481 763 aa15.77■□□□□ 0.11
EARS2-201ENST00000449606 EEA1Q15075 1411 aa15.76■□□□□ 0.11
EARS2-201ENST00000449606 RUSC2Q8N2Y8 1516 aa15.75■□□□□ 0.11
EARS2-201ENST00000449606 WRNQ14191 1432 aaPredicted RBP eCLIP15.75■□□□□ 0.11
EARS2-201ENST00000449606 HNRNPUL2Q1KMD3 747 aaKnown RBP15.71■□□□□ 0.11
EARS2-201ENST00000449606 GOLGA3Q08378 1498 aa15.7■□□□□ 0.1
EARS2-201ENST00000449606 DIEXFQ68CQ4 756 aaKnown RBP15.7■□□□□ 0.1
EARS2-201ENST00000449606 UNC13AQ9UPW8 1703 aa15.68■□□□□ 0.1
EARS2-201ENST00000449606 SCAF1Q9H7N4 1312 aaKnown RBP15.65■□□□□ 0.1
EARS2-201ENST00000449606 BAZ1BQ9UIG0 1483 aaKnown RBP15.62■□□□□ 0.09
EARS2-201ENST00000449606 BICRAQ9NZM4 1560 aa15.6■□□□□ 0.09
EARS2-201ENST00000449606 CENPBP07199 599 aaPredicted RBP15.6■□□□□ 0.09
EARS2-201ENST00000449606 CLIP1P30622 1438 aa15.59■□□□□ 0.09
EARS2-201ENST00000449606 CEP164Q9UPV0 1460 aa15.59■□□□□ 0.09
EARS2-201ENST00000449606 ATAD2BQ9ULI0 1458 aa15.57■□□□□ 0.08
EARS2-201ENST00000449606 ACIN1Q9UKV3 1341 aaKnown RBP15.54■□□□□ 0.08
EARS2-201ENST00000449606 MYT1Q01538 1121 aa15.53■□□□□ 0.08
EARS2-201ENST00000449606 ZNF316A6NFI3 1004 aaPredicted RBP15.52■□□□□ 0.08
EARS2-201ENST00000449606 NEUROD1Q13562 356 aa15.51■□□□□ 0.07
EARS2-201ENST00000449606 SYNJ1O43426 1573 aa15.51■□□□□ 0.07
EARS2-201ENST00000449606 YTHDC1Q96MU7 727 aaKnown RBP15.49■□□□□ 0.07
EARS2-201ENST00000449606 PEG3Q9GZU2 1588 aa15.47■□□□□ 0.07
EARS2-201ENST00000449606 RAPGEF2Q9Y4G8 1499 aa15.46■□□□□ 0.07
EARS2-201ENST00000449606 VPS8Q8N3P4 1428 aa15.45■□□□□ 0.06
EARS2-201ENST00000449606 GTF3C3Q9Y5Q9 886 aa15.43■□□□□ 0.06
EARS2-201ENST00000449606 KIF21BO75037 1637 aa15.4■□□□□ 0.06
EARS2-201ENST00000449606 ITGAEP38570 1179 aa15.35■□□□□ 0.05
EARS2-201ENST00000449606 MIER1Q8N108 512 aa15.31■□□□□ 0.04
EARS2-201ENST00000449606 KIF27Q86VH2 1401 aa15.29■□□□□ 0.04
EARS2-201ENST00000449606 KANK4Q5T7N3 995 aaPredicted RBP15.28■□□□□ 0.04
EARS2-201ENST00000449606 TOP2BQ02880 1626 aa15.28■□□□□ 0.04
EARS2-201ENST00000449606 ATP1B4Q9UN42 357 aaPredicted RBP15.26■□□□□ 0.03
EARS2-201ENST00000449606 NCAPD3P42695 1498 aa15.22■□□□□ 0.03
EARS2-201ENST00000449606 PRXQ9BXM0 1461 aa15.21■□□□□ 0.03
EARS2-201ENST00000449606 CUX1P39880 1505 aa15.18■□□□□ 0.02
EARS2-201ENST00000449606 ERICH3Q5RHP9 1530 aa15.17■□□□□ 0.02
EARS2-201ENST00000449606 ARAP1Q96P48 1450 aa15.17■□□□□ 0.02
EARS2-201ENST00000449606 P3H3Q8IVL6 736 aa15.16■□□□□ 0.02
EARS2-201ENST00000449606 HMGXB3Q12766 1538 aa15.14■□□□□ 0.01
EARS2-201ENST00000449606 BIVM-ERCC5R4GMW8 1640 aa15.14■□□□□ 0.01
EARS2-201ENST00000449606 CUX2O14529 1486 aa15.14■□□□□ 0.01
EARS2-201ENST00000449606 CLSPNQ9HAW4 1339 aa15.13■□□□□ 0.01
EARS2-201ENST00000449606 DHX57Q6P158 1386 aaKnown RBP15.13■□□□□ 0.01
EARS2-201ENST00000449606 FAM50AQ14320 339 aaKnown RBP15.13■□□□□ 0.01
EARS2-201ENST00000449606 CFTRP13569 1480 aa15.12■□□□□ 0.01
EARS2-201ENST00000449606 CCNB3Q8WWL7 1395 aa15.11■□□□□ 0.01
EARS2-201ENST00000449606 CARMIL1Q5VZK9 1371 aa15.08■□□□□ 0
EARS2-201ENST00000449606 ARHGAP35Q9NRY4 1499 aa15.06■□□□□ 0
EARS2-201ENST00000449606 IGF1RP08069 1367 aa15.06■□□□□ 0
EARS2-201ENST00000449606 CADPSQ9ULU8 1353 aa15.05■□□□□ 0
EARS2-201ENST00000449606 RRBP1Q9P2E9 1410 aaKnown RBP15.02■□□□□ -0
EARS2-201ENST00000449606 RAB3GAP2Q9H2M9 1393 aa14.98□□□□□ -0.01
EARS2-201ENST00000449606 FGD5Q6ZNL6 1462 aa14.98□□□□□ -0.01
EARS2-201ENST00000449606 FHAD1B1AJZ9 1412 aa14.93□□□□□ -0.02
EARS2-201ENST00000449606 SIN3AQ96ST3 1273 aa14.92□□□□□ -0.02
EARS2-201ENST00000449606 SETD5Q9C0A6 1442 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms