Protein–RNA interactions for Protein: Q8NEP7

KLHDC9, Kelch domain-containing protein 9, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC9Q8NEP7 PRKACA-208ENST00000589994 1127 ntTSL 2 BASIC15.15■□□□□ 0.02
KLHDC9Q8NEP7 ECSIT-211ENST00000592312 1286 ntTSL 5 BASIC15.15■□□□□ 0.02
KLHDC9Q8NEP7 AC003070.1-201ENST00000592389 457 ntTSL 2 BASIC15.15■□□□□ 0.02
KLHDC9Q8NEP7 AC092073.1-202ENST00000606020 653 ntTSL 3 BASIC15.15■□□□□ 0.02
KLHDC9Q8NEP7 HIST1H3E-201ENST00000614911 462 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
KLHDC9Q8NEP7 BX322562.1-201ENST00000617004 561 ntBASIC15.15■□□□□ 0.02
KLHDC9Q8NEP7 SFTPA2-205ENST00000640627 195 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
KLHDC9Q8NEP7 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
KLHDC9Q8NEP7 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
KLHDC9Q8NEP7 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC15.15■□□□□ 0.02
KLHDC9Q8NEP7 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
KLHDC9Q8NEP7 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
KLHDC9Q8NEP7 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
KLHDC9Q8NEP7 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
KLHDC9Q8NEP7 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
KLHDC9Q8NEP7 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC15.15■□□□□ 0.02
KLHDC9Q8NEP7 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
KLHDC9Q8NEP7 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
KLHDC9Q8NEP7 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
KLHDC9Q8NEP7 INTS4P1-203ENST00000641008 3683 ntBASIC15.14■□□□□ 0.01
KLHDC9Q8NEP7 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
KLHDC9Q8NEP7 AK6-202ENST00000380822 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
KLHDC9Q8NEP7 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
KLHDC9Q8NEP7 LINC02433-202ENST00000507108 1395 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
KLHDC9Q8NEP7 MPZL3-204ENST00000527472 1381 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
KLHDC9Q8NEP7 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
KLHDC9Q8NEP7 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC15.14■□□□□ 0.01
KLHDC9Q8NEP7 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
KLHDC9Q8NEP7 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC15.14■□□□□ 0.01
KLHDC9Q8NEP7 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
KLHDC9Q8NEP7 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
KLHDC9Q8NEP7 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
KLHDC9Q8NEP7 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
KLHDC9Q8NEP7 TMEM60-201ENST00000257663 1023 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
KLHDC9Q8NEP7 IL1F10-201ENST00000341010 1013 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
KLHDC9Q8NEP7 BCL2L11-203ENST00000357757 947 ntTSL 5 BASIC15.14■□□□□ 0.01
KLHDC9Q8NEP7 MYL4-202ENST00000393450 855 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
KLHDC9Q8NEP7 FAM197Y6-201ENST00000420524 766 ntBASIC15.14■□□□□ 0.01
KLHDC9Q8NEP7 KCNK15-AS1-202ENST00000427303 528 ntTSL 5 BASIC15.14■□□□□ 0.01
KLHDC9Q8NEP7 MKNK1-205ENST00000428112 1270 ntAPPRIS P3 TSL 2 BASIC15.14■□□□□ 0.01
KLHDC9Q8NEP7 HNF1A-AS1-201ENST00000433033 612 ntTSL 3 BASIC15.14■□□□□ 0.01
KLHDC9Q8NEP7 LAMTOR4-202ENST00000441173 730 ntTSL 2 BASIC15.14■□□□□ 0.01
KLHDC9Q8NEP7 SNRPD2P2-201ENST00000473818 333 ntBASIC15.14■□□□□ 0.01
KLHDC9Q8NEP7 AP000640.1-201ENST00000525337 879 ntTSL 2 BASIC15.14■□□□□ 0.01
KLHDC9Q8NEP7 ACER3-205ENST00000526597 1269 ntTSL 2 BASIC15.14■□□□□ 0.01
KLHDC9Q8NEP7 FXYD6-208ENST00000529335 708 ntTSL 3 BASIC15.14■□□□□ 0.01
KLHDC9Q8NEP7 RN7SL162P-201ENST00000579233 292 ntBASIC15.14■□□□□ 0.01
KLHDC9Q8NEP7 AL353997.6-201ENST00000583394 621 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
KLHDC9Q8NEP7 ZNF175-204ENST00000596504 580 ntTSL 2 BASIC15.14■□□□□ 0.01
KLHDC9Q8NEP7 AC021146.12-201ENST00000608365 477 ntTSL 2 BASIC15.14■□□□□ 0.01
KLHDC9Q8NEP7 AC106782.5-201ENST00000616011 337 ntBASIC15.14■□□□□ 0.01
KLHDC9Q8NEP7 AL353658.2-201ENST00000629794 519 ntTSL 5 BASIC15.14■□□□□ 0.01
KLHDC9Q8NEP7 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
KLHDC9Q8NEP7 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
KLHDC9Q8NEP7 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
KLHDC9Q8NEP7 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
KLHDC9Q8NEP7 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
KLHDC9Q8NEP7 CA2-201ENST00000285379 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
KLHDC9Q8NEP7 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC15.14■□□□□ 0.01
KLHDC9Q8NEP7 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
KLHDC9Q8NEP7 NRG1-211ENST00000520502 1330 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
KLHDC9Q8NEP7 SLC39A6-204ENST00000590986 3003 ntAPPRIS P3 TSL 5 BASIC15.14■□□□□ 0.01
KLHDC9Q8NEP7 LINC02486-201ENST00000604157 3000 ntBASIC15.14■□□□□ 0.01
KLHDC9Q8NEP7 MORN4-201ENST00000307450 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
KLHDC9Q8NEP7 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC15.14■□□□□ 0.01
KLHDC9Q8NEP7 CLUAP1-201ENST00000341633 1643 ntTSL 5 BASIC15.14■□□□□ 0.01
KLHDC9Q8NEP7 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
KLHDC9Q8NEP7 TUBAL3-201ENST00000380419 1798 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
KLHDC9Q8NEP7 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
KLHDC9Q8NEP7 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
KLHDC9Q8NEP7 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
KLHDC9Q8NEP7 SERHL2-201ENST00000327678 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
KLHDC9Q8NEP7 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
KLHDC9Q8NEP7 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC15.13■□□□□ 0.01
KLHDC9Q8NEP7 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
KLHDC9Q8NEP7 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC15.13■□□□□ 0.01
KLHDC9Q8NEP7 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
KLHDC9Q8NEP7 RNF181-201ENST00000306368 569 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
KLHDC9Q8NEP7 ARR3-201ENST00000307959 1292 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
KLHDC9Q8NEP7 SNX15-201ENST00000352068 771 ntTSL 5 BASIC15.13■□□□□ 0.01
KLHDC9Q8NEP7 RPLP1-202ENST00000357790 445 ntTSL 2 BASIC15.13■□□□□ 0.01
KLHDC9Q8NEP7 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
KLHDC9Q8NEP7 FOLR1-204ENST00000393681 1061 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
KLHDC9Q8NEP7 SERF2-204ENST00000402131 586 ntTSL 2 BASIC15.13■□□□□ 0.01
KLHDC9Q8NEP7 PPP1R7-205ENST00000404405 1009 ntTSL 3 BASIC15.13■□□□□ 0.01
KLHDC9Q8NEP7 PPIL3-205ENST00000409449 756 ntTSL 5 BASIC15.13■□□□□ 0.01
KLHDC9Q8NEP7 RNF181-203ENST00000441634 844 ntAPPRIS ALT1 TSL 2 BASIC15.13■□□□□ 0.01
KLHDC9Q8NEP7 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
KLHDC9Q8NEP7 KIAA1191-210ENST00000510164 1243 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
KLHDC9Q8NEP7 ISL1-203ENST00000511384 981 ntTSL 5 BASIC15.13■□□□□ 0.01
KLHDC9Q8NEP7 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC15.13■□□□□ 0.01
KLHDC9Q8NEP7 AP003043.1-201ENST00000527804 547 ntTSL 4 BASIC15.13■□□□□ 0.01
KLHDC9Q8NEP7 SAA2-206ENST00000530400 323 ntTSL 3 BASIC15.13■□□□□ 0.01
KLHDC9Q8NEP7 SLC13A2-205ENST00000545060 1276 ntTSL 5 BASIC15.13■□□□□ 0.01
KLHDC9Q8NEP7 TRAPPC2L-212ENST00000567312 499 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
KLHDC9Q8NEP7 CARHSP1-208ENST00000567554 598 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
KLHDC9Q8NEP7 LINC01996-201ENST00000573270 1273 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
KLHDC9Q8NEP7 SHBG-217ENST00000576478 639 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
KLHDC9Q8NEP7 AC007431.1-201ENST00000578662 1412 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
KLHDC9Q8NEP7 AC006986.1-201ENST00000612764 241 ntBASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 76.7 ms