Protein–RNA interactions for Protein: P78357

CNTNAP1, Contactin-associated protein 1, humanhuman

Predictions only

Length 1,384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP1P78357 TMEM154-202ENST00000504064 878 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CNTNAP1P78357 AC004923.1-201ENST00000527543 776 ntTSL 5 BASIC16.35■□□□□ 0.21
CNTNAP1P78357 AL136298.3-201ENST00000556746 445 ntBASIC16.35■□□□□ 0.21
CNTNAP1P78357 SNX20-205ENST00000610485 557 ntTSL 5 BASIC16.35■□□□□ 0.21
CNTNAP1P78357 MECP2-213ENST00000622433 1071 ntTSL 5 BASIC16.35■□□□□ 0.21
CNTNAP1P78357 MEP1AP1-201ENST00000636082 1097 ntBASIC16.35■□□□□ 0.21
CNTNAP1P78357 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CNTNAP1P78357 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CNTNAP1P78357 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CNTNAP1P78357 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CNTNAP1P78357 GPNMB-203ENST00000409458 1673 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CNTNAP1P78357 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CNTNAP1P78357 INTS4P1-203ENST00000641008 3683 ntBASIC16.35■□□□□ 0.21
CNTNAP1P78357 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CNTNAP1P78357 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC16.35■□□□□ 0.21
CNTNAP1P78357 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CNTNAP1P78357 ZNRF4-201ENST00000222033 1426 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
CNTNAP1P78357 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CNTNAP1P78357 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CNTNAP1P78357 MINDY1-205ENST00000493834 1546 ntTSL 2 BASIC16.34■□□□□ 0.21
CNTNAP1P78357 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
CNTNAP1P78357 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.34■□□□□ 0.21
CNTNAP1P78357 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CNTNAP1P78357 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
CNTNAP1P78357 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CNTNAP1P78357 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CNTNAP1P78357 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC16.34■□□□□ 0.21
CNTNAP1P78357 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CNTNAP1P78357 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CNTNAP1P78357 FAM189A2-202ENST00000303068 2051 ntTSL 2 BASIC16.34■□□□□ 0.21
CNTNAP1P78357 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
CNTNAP1P78357 GTF2A1L-201ENST00000403751 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CNTNAP1P78357 Z82195.2-202ENST00000458525 1646 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CNTNAP1P78357 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CNTNAP1P78357 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC16.34■□□□□ 0.21
CNTNAP1P78357 RNF181-201ENST00000306368 569 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CNTNAP1P78357 HNRNPA3P12-201ENST00000437410 1063 ntBASIC16.34■□□□□ 0.21
CNTNAP1P78357 AL121656.1-201ENST00000440786 482 ntTSL 5 BASIC16.34■□□□□ 0.21
CNTNAP1P78357 C10orf90-207ENST00000480379 1012 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
CNTNAP1P78357 CHIC2-204ENST00000512964 711 ntTSL 5 BASIC16.34■□□□□ 0.21
CNTNAP1P78357 CSRP2-207ENST00000552330 910 ntTSL 3 BASIC16.34■□□□□ 0.21
CNTNAP1P78357 AL139317.2-201ENST00000556998 158 ntBASIC16.34■□□□□ 0.21
CNTNAP1P78357 AC022966.2-201ENST00000587434 367 ntBASIC16.34■□□□□ 0.21
CNTNAP1P78357 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CNTNAP1P78357 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
CNTNAP1P78357 POLR1C-203ENST00000372389 1355 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CNTNAP1P78357 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CNTNAP1P78357 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
CNTNAP1P78357 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC16.34■□□□□ 0.21
CNTNAP1P78357 ATP6V1C1-205ENST00000521514 1484 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CNTNAP1P78357 UBBP4-202ENST00000584755 1459 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CNTNAP1P78357 KCNIP2-203ENST00000348850 2089 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CNTNAP1P78357 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
CNTNAP1P78357 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
CNTNAP1P78357 AP4M1-204ENST00000421755 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CNTNAP1P78357 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC16.33■□□□□ 0.21
CNTNAP1P78357 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
CNTNAP1P78357 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CNTNAP1P78357 LINC02486-201ENST00000604157 3000 ntBASIC16.33■□□□□ 0.21
CNTNAP1P78357 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CNTNAP1P78357 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CNTNAP1P78357 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC16.33■□□□□ 0.21
CNTNAP1P78357 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
CNTNAP1P78357 AC009542.1-201ENST00000412549 1810 ntTSL 2 BASIC16.33■□□□□ 0.2
CNTNAP1P78357 SHISA5-206ENST00000426002 1839 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CNTNAP1P78357 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CNTNAP1P78357 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CNTNAP1P78357 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC16.33■□□□□ 0.2
CNTNAP1P78357 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CNTNAP1P78357 HIGD2A-201ENST00000274787 668 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CNTNAP1P78357 HAX1-201ENST00000328703 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CNTNAP1P78357 AL355482.2-201ENST00000428646 1145 ntTSL 2 BASIC16.33■□□□□ 0.2
CNTNAP1P78357 AL590399.1-204ENST00000430302 781 ntTSL 5 BASIC16.33■□□□□ 0.2
CNTNAP1P78357 LINC01833-204ENST00000444871 581 ntTSL 3 BASIC16.33■□□□□ 0.2
CNTNAP1P78357 AC007279.1-201ENST00000448547 837 ntBASIC16.33■□□□□ 0.2
CNTNAP1P78357 AC233724.9-201ENST00000511694 407 ntBASIC16.33■□□□□ 0.2
CNTNAP1P78357 METTL7AP1-201ENST00000547343 496 ntBASIC16.33■□□□□ 0.2
CNTNAP1P78357 AL139316.1-201ENST00000555643 568 ntTSL 3 BASIC16.33■□□□□ 0.2
CNTNAP1P78357 PCTP-206ENST00000573500 919 ntTSL 3 BASIC16.33■□□□□ 0.2
CNTNAP1P78357 LINC01836-201ENST00000586061 829 ntTSL 3 BASIC16.33■□□□□ 0.2
CNTNAP1P78357 AC048380.1-201ENST00000589818 465 ntTSL 3 BASIC16.33■□□□□ 0.2
CNTNAP1P78357 AC123912.6-201ENST00000612657 315 ntBASIC16.33■□□□□ 0.2
CNTNAP1P78357 SFTPA2-205ENST00000640627 195 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CNTNAP1P78357 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
CNTNAP1P78357 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CNTNAP1P78357 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
CNTNAP1P78357 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CNTNAP1P78357 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC16.33■□□□□ 0.2
CNTNAP1P78357 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
CNTNAP1P78357 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CNTNAP1P78357 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
CNTNAP1P78357 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CNTNAP1P78357 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC16.33■□□□□ 0.2
CNTNAP1P78357 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
CNTNAP1P78357 FMO6P-201ENST00000236166 1620 ntBASIC16.33■□□□□ 0.2
CNTNAP1P78357 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CNTNAP1P78357 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CNTNAP1P78357 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CNTNAP1P78357 HSPA7-201ENST00000445535 1927 ntBASIC16.32■□□□□ 0.2
CNTNAP1P78357 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms