Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 LINC01019-201ENST00000505443 3199 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
NKX2-1P43699 RRBP1-206ENST00000455029 2485 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
NKX2-1P43699 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
NKX2-1P43699 KCNT1-213ENST00000630792 3606 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
NKX2-1P43699 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC11.56□□□□□ -0.56
NKX2-1P43699 KANK4-201ENST00000317477 2080 ntTSL 2 BASIC11.56□□□□□ -0.56
NKX2-1P43699 ESYT1-202ENST00000394048 4388 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
NKX2-1P43699 BAK1-203ENST00000442998 2212 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
NKX2-1P43699 OPRL1-202ENST00000349451 3369 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
NKX2-1P43699 FRMD6-203ENST00000395718 4828 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
NKX2-1P43699 CDK11B-203ENST00000341832 2998 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
NKX2-1P43699 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC11.56□□□□□ -0.56
NKX2-1P43699 ELN-211ENST00000414324 3139 ntAPPRIS ALT2 TSL 2 BASIC11.56□□□□□ -0.56
NKX2-1P43699 LILRB1-203ENST00000396317 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
NKX2-1P43699 FAM189A2-204ENST00000455972 2107 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
NKX2-1P43699 SPTBN2-210ENST00000611817 2890 ntTSL 2 BASIC11.56□□□□□ -0.56
NKX2-1P43699 CDH11-201ENST00000268603 6857 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
NKX2-1P43699 NFATC1-204ENST00000397790 3453 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
NKX2-1P43699 C10orf105-202ENST00000441508 4836 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
NKX2-1P43699 DNMT1-201ENST00000340748 5408 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
NKX2-1P43699 RTL10-201ENST00000328554 6619 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
NKX2-1P43699 CACNA1C-209ENST00000399603 7377 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
NKX2-1P43699 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
NKX2-1P43699 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
NKX2-1P43699 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
NKX2-1P43699 LRRN2-201ENST00000367175 5036 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
NKX2-1P43699 STXBP1-202ENST00000373302 3967 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
NKX2-1P43699 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC11.56□□□□□ -0.56
NKX2-1P43699 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
NKX2-1P43699 WDR6-201ENST00000395474 4401 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
NKX2-1P43699 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
NKX2-1P43699 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC11.56□□□□□ -0.56
NKX2-1P43699 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC11.56□□□□□ -0.56
NKX2-1P43699 HNRNPA1P40-201ENST00000426371 1278 ntBASIC11.56□□□□□ -0.56
NKX2-1P43699 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
NKX2-1P43699 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC11.56□□□□□ -0.56
NKX2-1P43699 CICP12-201ENST00000455801 843 ntBASIC11.56□□□□□ -0.56
NKX2-1P43699 AL390066.1-201ENST00000456414 2302 ntTSL 2 BASIC11.56□□□□□ -0.56
NKX2-1P43699 CYMP-203ENST00000474680 1263 ntBASIC11.56□□□□□ -0.56
NKX2-1P43699 HNRNPA1P13-201ENST00000510646 963 ntBASIC11.56□□□□□ -0.56
NKX2-1P43699 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC11.56□□□□□ -0.56
NKX2-1P43699 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC11.56□□□□□ -0.56
NKX2-1P43699 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
NKX2-1P43699 AL512310.5-201ENST00000551999 515 ntBASIC11.56□□□□□ -0.56
NKX2-1P43699 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
NKX2-1P43699 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC11.56□□□□□ -0.56
NKX2-1P43699 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC11.56□□□□□ -0.56
NKX2-1P43699 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC11.56□□□□□ -0.56
NKX2-1P43699 RN7SL48P-201ENST00000579283 293 ntBASIC11.56□□□□□ -0.56
NKX2-1P43699 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC11.56□□□□□ -0.56
NKX2-1P43699 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
NKX2-1P43699 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC11.56□□□□□ -0.56
NKX2-1P43699 C5orf56-206ENST00000612967 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
NKX2-1P43699 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC11.56□□□□□ -0.56
NKX2-1P43699 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC11.56□□□□□ -0.56
NKX2-1P43699 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
NKX2-1P43699 AHI1-205ENST00000457866 5549 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
NKX2-1P43699 CCDC14-220ENST00000488653 4156 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
NKX2-1P43699 SPECC1-206ENST00000395530 8133 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
NKX2-1P43699 DNAJC3-202ENST00000602402 5591 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
NKX2-1P43699 HEXA-206ENST00000566304 1795 ntTSL 2 BASIC11.56□□□□□ -0.56
NKX2-1P43699 USE1-206ENST00000595101 1776 ntTSL 2 BASIC11.56□□□□□ -0.56
NKX2-1P43699 CHD4-211ENST00000544484 6554 ntTSL 2 BASIC11.56□□□□□ -0.56
NKX2-1P43699 NIPSNAP3A-201ENST00000374767 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
NKX2-1P43699 IL10-202ENST00000423557 1630 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
NKX2-1P43699 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC11.56□□□□□ -0.56
NKX2-1P43699 SLC39A6-204ENST00000590986 3003 ntAPPRIS P3 TSL 5 BASIC11.56□□□□□ -0.56
NKX2-1P43699 LAP3P2-201ENST00000454686 1454 ntBASIC11.56□□□□□ -0.56
NKX2-1P43699 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
NKX2-1P43699 GABPB1-201ENST00000220429 2726 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
NKX2-1P43699 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
NKX2-1P43699 PCDHA4-202ENST00000512229 4163 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
NKX2-1P43699 GPC4-201ENST00000370828 4960 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
NKX2-1P43699 RNF111-201ENST00000348370 5913 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
NKX2-1P43699 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC11.56□□□□□ -0.56
NKX2-1P43699 TMEM229B-207ENST00000557006 3941 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
NKX2-1P43699 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
NKX2-1P43699 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
NKX2-1P43699 ADARB1-214ENST00000629643 4583 ntTSL 5 BASIC11.55□□□□□ -0.56
NKX2-1P43699 PSMD12-201ENST00000356126 4406 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
NKX2-1P43699 LRRC15-201ENST00000347624 5883 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
NKX2-1P43699 NRP1-202ENST00000374816 2804 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
NKX2-1P43699 HDLBP-214ENST00000427183 6238 ntTSL 2 BASIC11.55□□□□□ -0.56
NKX2-1P43699 PAX2-203ENST00000370296 4140 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
NKX2-1P43699 PAX2-205ENST00000428433 4126 ntTSL 5 BASIC11.55□□□□□ -0.56
NKX2-1P43699 MYRIP-204ENST00000444716 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
NKX2-1P43699 ATP6V0A1-206ENST00000585525 2679 ntTSL 2 BASIC11.55□□□□□ -0.56
NKX2-1P43699 CATSPERE-203ENST00000366534 3333 ntAPPRIS ALT2 TSL 2 BASIC11.55□□□□□ -0.56
NKX2-1P43699 FBN1-201ENST00000316623 11756 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
NKX2-1P43699 ARID4A-206ENST00000431317 5783 ntTSL 5 BASIC11.55□□□□□ -0.56
NKX2-1P43699 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
NKX2-1P43699 GLP2R-204ENST00000574745 1882 ntTSL 2 BASIC11.55□□□□□ -0.56
NKX2-1P43699 TASP1-201ENST00000337743 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
NKX2-1P43699 AOC1-204ENST00000467291 2857 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
NKX2-1P43699 DPAGT1-217ENST00000639704 1719 ntTSL 5 BASIC11.55□□□□□ -0.56
NKX2-1P43699 PNPLA6-204ENST00000545201 4502 ntTSL 2 BASIC11.55□□□□□ -0.56
NKX2-1P43699 ARHGAP21-217ENST00000612832 5514 ntTSL 5 BASIC11.55□□□□□ -0.56
NKX2-1P43699 PCDHGB1-201ENST00000523390 4590 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
NKX2-1P43699 AC090114.2-201ENST00000608477 7054 ntBASIC11.55□□□□□ -0.56
NKX2-1P43699 NPTN-201ENST00000345330 2444 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms