Protein–RNA interactions for Protein: P43354

NR4A2, Nuclear receptor subfamily 4 group A member 2, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A2P43354 HMGCL-203ENST00000374490 1600 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
NR4A2P43354 DCAF8-201ENST00000326837 3972 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
NR4A2P43354 SIRT2-201ENST00000249396 2070 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
NR4A2P43354 NHEJ1-201ENST00000356853 2094 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
NR4A2P43354 SIRT2-204ENST00000392081 2062 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
NR4A2P43354 AHI1-201ENST00000265602 4335 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
NR4A2P43354 MEGF11-201ENST00000288745 5707 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
NR4A2P43354 ARL13B-210ENST00000535334 3906 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
NR4A2P43354 ARAP1-202ENST00000359373 5767 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.35
NR4A2P43354 WDR60-202ENST00000407559 3769 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
NR4A2P43354 AC073335.2-201ENST00000610177 3441 ntBASIC12.9□□□□□ -0.35
NR4A2P43354 SAP30BP-225ENST00000584667 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
NR4A2P43354 BDH1-203ENST00000392379 3546 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
NR4A2P43354 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
NR4A2P43354 AL138709.1-201ENST00000614840 1693 ntBASIC12.89□□□□□ -0.35
NR4A2P43354 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
NR4A2P43354 CYP4F11-205ENST00000620614 2908 ntTSL 5 BASIC12.89□□□□□ -0.35
NR4A2P43354 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
NR4A2P43354 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC12.89□□□□□ -0.35
NR4A2P43354 NCOR2-208ENST00000429285 8475 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
NR4A2P43354 LAMB2-201ENST00000305544 5643 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
NR4A2P43354 NAGK-202ENST00000418807 2343 ntTSL 5 BASIC12.89□□□□□ -0.35
NR4A2P43354 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
NR4A2P43354 ALDH1L1-202ENST00000393431 2797 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
NR4A2P43354 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
NR4A2P43354 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
NR4A2P43354 DOK4-210ENST00000566936 2851 ntTSL 3 BASIC12.89□□□□□ -0.35
NR4A2P43354 TMEM147-AS1-205ENST00000590717 3300 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
NR4A2P43354 EPN2-202ENST00000347697 4664 ntAPPRIS ALT1 TSL 5 BASIC12.89□□□□□ -0.35
NR4A2P43354 DYNC1LI1-201ENST00000273130 2504 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
NR4A2P43354 CACNA1G-230ENST00000514717 6699 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
NR4A2P43354 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
NR4A2P43354 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC12.89□□□□□ -0.35
NR4A2P43354 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC12.89□□□□□ -0.35
NR4A2P43354 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC12.89□□□□□ -0.35
NR4A2P43354 TMEM100-201ENST00000424486 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
NR4A2P43354 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
NR4A2P43354 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
NR4A2P43354 AC092117.1-201ENST00000621230 3250 ntBASIC12.89□□□□□ -0.35
NR4A2P43354 TSC22D1-203ENST00000458659 4820 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
NR4A2P43354 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
NR4A2P43354 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
NR4A2P43354 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
NR4A2P43354 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC12.89□□□□□ -0.35
NR4A2P43354 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC12.89□□□□□ -0.35
NR4A2P43354 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC12.89□□□□□ -0.35
NR4A2P43354 BCYRN1-201ENST00000418539 200 ntBASIC12.89□□□□□ -0.35
NR4A2P43354 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
NR4A2P43354 NUS1P3-201ENST00000423502 862 ntBASIC12.89□□□□□ -0.35
NR4A2P43354 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC12.89□□□□□ -0.35
NR4A2P43354 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
NR4A2P43354 AC114812.1-204ENST00000449669 728 ntBASIC12.89□□□□□ -0.35
NR4A2P43354 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
NR4A2P43354 RNA5SP486-201ENST00000515961 83 ntBASIC12.89□□□□□ -0.35
NR4A2P43354 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC12.89□□□□□ -0.35
NR4A2P43354 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
NR4A2P43354 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC12.89□□□□□ -0.35
NR4A2P43354 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC12.89□□□□□ -0.35
NR4A2P43354 HERPUD1-204ENST00000439977 2946 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
NR4A2P43354 OCRL-201ENST00000357121 5138 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
NR4A2P43354 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC12.89□□□□□ -0.35
NR4A2P43354 PCMTD1-208ENST00000544451 3697 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
NR4A2P43354 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
NR4A2P43354 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
NR4A2P43354 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC12.89□□□□□ -0.35
NR4A2P43354 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC12.89□□□□□ -0.35
NR4A2P43354 FAM78A-203ENST00000372271 3966 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
NR4A2P43354 VAMP1-201ENST00000361716 3449 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
NR4A2P43354 SLC13A4-201ENST00000354042 2897 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
NR4A2P43354 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
NR4A2P43354 FOXN3-219ENST00000615335 2421 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
NR4A2P43354 KLF7-204ENST00000423015 1788 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
NR4A2P43354 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
NR4A2P43354 ZNF384-201ENST00000319770 3266 ntTSL 2 BASIC12.89□□□□□ -0.35
NR4A2P43354 PCDHGA3-201ENST00000253812 4771 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
NR4A2P43354 CCT3-211ENST00000472765 1858 ntTSL 2 BASIC12.89□□□□□ -0.35
NR4A2P43354 MRPL17-201ENST00000288937 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
NR4A2P43354 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
NR4A2P43354 ADAM32-206ENST00000519315 2168 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
NR4A2P43354 NEU3-201ENST00000294064 6728 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
NR4A2P43354 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
NR4A2P43354 AGAP6-202ENST00000412531 2372 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
NR4A2P43354 OSTM1-AS1-202ENST00000441184 3334 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
NR4A2P43354 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
NR4A2P43354 AOC3-201ENST00000308423 4026 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
NR4A2P43354 DSN1-201ENST00000373734 1915 ntTSL 2 BASIC12.88□□□□□ -0.35
NR4A2P43354 AL583810.2-201ENST00000556430 3254 ntBASIC12.88□□□□□ -0.35
NR4A2P43354 RAPGEF4-AS1-202ENST00000435328 4625 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
NR4A2P43354 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC12.88□□□□□ -0.35
NR4A2P43354 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
NR4A2P43354 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
NR4A2P43354 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
NR4A2P43354 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC12.88□□□□□ -0.35
NR4A2P43354 LINC00638-201ENST00000555578 2518 ntBASIC12.88□□□□□ -0.35
NR4A2P43354 STAT3-203ENST00000404395 2633 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
NR4A2P43354 KCNJ11-201ENST00000339994 2801 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
NR4A2P43354 DYNC1I1-202ENST00000359388 2843 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
NR4A2P43354 NCSTN-201ENST00000294785 2936 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
NR4A2P43354 LINC01993-201ENST00000374945 2934 ntTSL 2 BASIC12.88□□□□□ -0.35
NR4A2P43354 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms