Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 MIR4539-201ENST00000579784 60 ntBASIC15.07■□□□□ 0
HTTP42858 AP001180.4-201ENST00000584167 823 ntTSL 3 BASIC15.07■□□□□ 0
HTTP42858 MECP2-226ENST00000640414 897 ntTSL 5 BASIC15.07■□□□□ 0
HTTP42858 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC15.07■□□□□ 0
HTTP42858 SKAP1-208ENST00000584924 1477 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
HTTP42858 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC15.07■□□□□ 0
HTTP42858 ENSA-208ENST00000369014 2085 ntAPPRIS P4 TSL 1 (best) BASIC15.07■□□□□ 0
HTTP42858 AC012358.2-201ENST00000430010 1434 ntBASIC15.07■□□□□ 0
HTTP42858 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC15.07■□□□□ 0
HTTP42858 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
HTTP42858 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
HTTP42858 CCNB2-201ENST00000288207 1556 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
HTTP42858 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
HTTP42858 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
HTTP42858 CAPG-204ENST00000409724 1151 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
HTTP42858 CXXC1P1-202ENST00000489409 1212 ntBASIC15.07■□□□□ 0
HTTP42858 GIMD1-201ENST00000507153 654 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
HTTP42858 AC005154.1-202ENST00000578293 999 ntTSL 5 BASIC15.07■□□□□ 0
HTTP42858 AC108002.3-201ENST00000612629 503 ntTSL 2 BASIC15.07■□□□□ 0
HTTP42858 AC091905.3-201ENST00000624959 234 ntBASIC15.07■□□□□ 0
HTTP42858 ENO3-201ENST00000323997 1521 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
HTTP42858 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC15.07■□□□□ 0
HTTP42858 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
HTTP42858 HTR4-203ENST00000377888 2962 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
HTTP42858 CREBRF-203ENST00000520420 1660 ntTSL 1 (best) BASIC15.07■□□□□ 0
HTTP42858 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC15.07■□□□□ 0
HTTP42858 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
HTTP42858 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
HTTP42858 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
HTTP42858 SLC25A18-202ENST00000399813 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
HTTP42858 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC15.06■□□□□ 0
HTTP42858 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
HTTP42858 CETP-201ENST00000200676 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
HTTP42858 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
HTTP42858 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
HTTP42858 CTLA4-203ENST00000427473 969 ntTSL 5 BASIC15.06■□□□□ 0
HTTP42858 AQP7-207ENST00000447660 998 ntTSL 2 BASIC15.06■□□□□ 0
HTTP42858 FDPS-206ENST00000467076 1178 ntAPPRIS ALT1 TSL 3 BASIC15.06■□□□□ 0
HTTP42858 SAA2-206ENST00000530400 323 ntTSL 3 BASIC15.06■□□□□ 0
HTTP42858 AC093072.1-201ENST00000589196 602 ntTSL 4 BASIC15.06■□□□□ 0
HTTP42858 AL117379.1-201ENST00000619319 677 ntBASIC15.06■□□□□ 0
HTTP42858 AL354704.1-201ENST00000629369 1966 ntTSL 1 (best) BASIC15.06■□□□□ 0
HTTP42858 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
HTTP42858 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC15.06■□□□□ 0
HTTP42858 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
HTTP42858 CDK20-209ENST00000605159 1860 ntTSL 1 (best) BASIC15.06■□□□□ 0
HTTP42858 AC024475.2-201ENST00000312173 879 ntBASIC15.06■□□□□ 0
HTTP42858 LAMTOR2-203ENST00000368305 655 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
HTTP42858 SUSD3-201ENST00000375469 1114 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
HTTP42858 SERF2-204ENST00000402131 586 ntTSL 2 BASIC15.06■□□□□ 0
HTTP42858 RPP30-203ENST00000413330 1004 ntTSL 5 BASIC15.06■□□□□ 0
HTTP42858 AC005822.1-201ENST00000414124 1034 ntBASIC15.06■□□□□ 0
HTTP42858 AL358876.2-201ENST00000424689 477 ntTSL 3 BASIC15.06■□□□□ 0
HTTP42858 NR1I3-210ENST00000437437 973 ntTSL 1 (best) BASIC15.06■□□□□ 0
HTTP42858 AL136360.2-201ENST00000502636 581 ntTSL 4 BASIC15.06■□□□□ 0
HTTP42858 AC067942.2-201ENST00000506227 1268 ntBASIC15.06■□□□□ 0
HTTP42858 IL32-230ENST00000551122 733 ntAPPRIS ALT2 TSL 3 BASIC15.06■□□□□ 0
HTTP42858 AC244097.1-201ENST00000621631 1216 ntBASIC15.06■□□□□ 0
HTTP42858 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
HTTP42858 AC111188.1-201ENST00000525758 1833 ntTSL 1 (best) BASIC15.06■□□□□ 0
HTTP42858 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
HTTP42858 CPPED1-203ENST00000433677 1993 ntTSL 1 (best) BASIC15.06■□□□□ 0
HTTP42858 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC15.06■□□□□ 0
HTTP42858 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
HTTP42858 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC15.06■□□□□ 0
HTTP42858 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
HTTP42858 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
HTTP42858 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
HTTP42858 CDIP1-201ENST00000399599 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
HTTP42858 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
HTTP42858 KIR2DL1-201ENST00000291633 1203 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
HTTP42858 FCRLA-202ENST00000294796 766 ntTSL 1 (best) BASIC15.06■□□□□ 0
HTTP42858 CLDN10-AS1-201ENST00000416909 895 ntTSL 1 (best) BASIC15.06■□□□□ 0
HTTP42858 AL049792.1-201ENST00000424708 1262 ntBASIC15.06■□□□□ 0
HTTP42858 NDFIP2-AS1-201ENST00000457171 431 ntTSL 3 BASIC15.06■□□□□ 0
HTTP42858 RN7SL148P-201ENST00000467120 279 ntBASIC15.06■□□□□ 0
HTTP42858 AL589666.1-201ENST00000503906 835 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
HTTP42858 HNRNPA1P4-201ENST00000509706 756 ntBASIC15.06■□□□□ 0
HTTP42858 SNRPD2-203ENST00000585392 379 ntTSL 3 BASIC15.06■□□□□ 0
HTTP42858 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
HTTP42858 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC15.05■□□□□ 0
HTTP42858 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
HTTP42858 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
HTTP42858 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC15.05■□□□□ 0
HTTP42858 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
HTTP42858 TMEM78-201ENST00000323223 2175 ntAPPRIS P1 BASIC15.05■□□□□ 0
HTTP42858 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC15.05■□□□□ 0
HTTP42858 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ 0
HTTP42858 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
HTTP42858 AC015656.1-201ENST00000624209 3578 ntBASIC15.05■□□□□ 0
HTTP42858 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
HTTP42858 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
HTTP42858 CICP24-201ENST00000605464 2705 ntBASIC15.05■□□□□ 0
HTTP42858 PPP4R1L-201ENST00000244070 1474 ntTSL 1 (best) BASIC15.05■□□□□ 0
HTTP42858 LIPC-204ENST00000433326 1484 ntTSL 2 BASIC15.05■□□□□ 0
HTTP42858 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC15.05■□□□□ 0
HTTP42858 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC15.05■□□□□ 0
HTTP42858 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ 0
HTTP42858 RN7SKP255-201ENST00000363442 313 ntBASIC15.05■□□□□ -0
HTTP42858 RN7SKP203-201ENST00000363618 332 ntBASIC15.05■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms