Protein–RNA interactions for Protein: P31025

LCN1, Lipocalin-1, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCN1P31025 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
LCN1P31025 RNA5SP359-201ENST00000364838 113 ntBASIC13.07□□□□□ -0.32
LCN1P31025 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LCN1P31025 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
LCN1P31025 AC006987.1-201ENST00000413610 527 ntBASIC13.07□□□□□ -0.32
LCN1P31025 BX679664.3-201ENST00000414070 555 ntBASIC13.07□□□□□ -0.32
LCN1P31025 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
LCN1P31025 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC13.07□□□□□ -0.32
LCN1P31025 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
LCN1P31025 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC13.07□□□□□ -0.32
LCN1P31025 DUX4L50-201ENST00000455245 715 ntBASIC13.07□□□□□ -0.32
LCN1P31025 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LCN1P31025 AKR7A2P1-201ENST00000460134 915 ntBASIC13.07□□□□□ -0.32
LCN1P31025 AC113935.1-201ENST00000471722 555 ntBASIC13.07□□□□□ -0.32
LCN1P31025 POU5F1P2-201ENST00000521750 823 ntBASIC13.07□□□□□ -0.32
LCN1P31025 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC13.07□□□□□ -0.32
LCN1P31025 AC090857.1-201ENST00000527400 390 ntBASIC13.07□□□□□ -0.32
LCN1P31025 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC13.07□□□□□ -0.32
LCN1P31025 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
LCN1P31025 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
LCN1P31025 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC13.07□□□□□ -0.32
LCN1P31025 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC13.07□□□□□ -0.32
LCN1P31025 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC13.07□□□□□ -0.32
LCN1P31025 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
LCN1P31025 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
LCN1P31025 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC13.07□□□□□ -0.32
LCN1P31025 ALAS1-204ENST00000469224 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LCN1P31025 YPEL4-201ENST00000300022 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LCN1P31025 SRGAP3-201ENST00000360413 8415 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
LCN1P31025 FRMPD2B-201ENST00000431305 1347 ntBASIC13.07□□□□□ -0.32
LCN1P31025 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
LCN1P31025 ARMCX2-201ENST00000328766 2762 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LCN1P31025 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC13.07□□□□□ -0.32
LCN1P31025 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC13.07□□□□□ -0.32
LCN1P31025 ZNF843-202ENST00000564218 3816 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
LCN1P31025 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC13.07□□□□□ -0.32
LCN1P31025 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC13.07□□□□□ -0.32
LCN1P31025 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC13.07□□□□□ -0.32
LCN1P31025 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LCN1P31025 AL139158.3-201ENST00000641212 1562 ntBASIC13.07□□□□□ -0.32
LCN1P31025 TGFBR3-201ENST00000212355 6465 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
LCN1P31025 POU2F2-202ENST00000389341 6901 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
LCN1P31025 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LCN1P31025 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
LCN1P31025 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LCN1P31025 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
LCN1P31025 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LCN1P31025 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LCN1P31025 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
LCN1P31025 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
LCN1P31025 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LCN1P31025 MAP7-202ENST00000432797 4375 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
LCN1P31025 UBE3A-228ENST00000638155 9131 ntAPPRIS P3 TSL 5 BASIC13.06□□□□□ -0.32
LCN1P31025 PRDM16-201ENST00000270722 8690 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
LCN1P31025 SYDE1-201ENST00000342784 3264 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
LCN1P31025 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
LCN1P31025 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LCN1P31025 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LCN1P31025 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
LCN1P31025 PPP2R5E-201ENST00000337537 6659 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
LCN1P31025 UBFD1-207ENST00000567212 4727 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
LCN1P31025 C19orf33-201ENST00000301246 467 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
LCN1P31025 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
LCN1P31025 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
LCN1P31025 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
LCN1P31025 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
LCN1P31025 MIR1247-201ENST00000408206 136 ntBASIC13.06□□□□□ -0.32
LCN1P31025 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
LCN1P31025 GPAA1P2-201ENST00000417923 928 ntBASIC13.06□□□□□ -0.32
LCN1P31025 AC006335.1-201ENST00000445200 547 ntBASIC13.06□□□□□ -0.32
LCN1P31025 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC13.06□□□□□ -0.32
LCN1P31025 AC116345.2-201ENST00000512837 523 ntBASIC13.06□□□□□ -0.32
LCN1P31025 RERG-205ENST00000537647 935 ntTSL 2 BASIC13.06□□□□□ -0.32
LCN1P31025 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
LCN1P31025 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC13.06□□□□□ -0.32
LCN1P31025 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
LCN1P31025 PCDHGA3-201ENST00000253812 4771 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
LCN1P31025 SGTB-201ENST00000381007 5469 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LCN1P31025 USP3-204ENST00000540797 5474 ntTSL 2 BASIC13.06□□□□□ -0.32
LCN1P31025 KLHL34-201ENST00000379499 3641 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
LCN1P31025 SLC4A5-201ENST00000346834 6233 ntAPPRIS P4 TSL 5 BASIC13.06□□□□□ -0.32
LCN1P31025 CX3CL1-204ENST00000565912 5796 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
LCN1P31025 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
LCN1P31025 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LCN1P31025 CD99L2-205ENST00000437787 3493 ntTSL 2 BASIC13.06□□□□□ -0.32
LCN1P31025 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
LCN1P31025 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC13.06□□□□□ -0.32
LCN1P31025 BRD7P5-201ENST00000299197 1822 ntBASIC13.06□□□□□ -0.32
LCN1P31025 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC13.06□□□□□ -0.32
LCN1P31025 FAM98A-201ENST00000238823 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LCN1P31025 CAND2-204ENST00000456430 4573 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LCN1P31025 ASAP1-201ENST00000357668 6344 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
LCN1P31025 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
LCN1P31025 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
LCN1P31025 AC020907.1-201ENST00000616460 1350 ntBASIC13.06□□□□□ -0.32
LCN1P31025 AC083964.2-201ENST00000623988 2396 ntBASIC13.06□□□□□ -0.32
LCN1P31025 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
LCN1P31025 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
LCN1P31025 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
LCN1P31025 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms