Protein–RNA interactions for Protein: P12838

DEFA4, Neutrophil defensin 4, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA4P12838 ADAMTSL2-203ENST00000393061 4270 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
DEFA4P12838 C1S-202ENST00000360817 2635 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
DEFA4P12838 TBC1D3E-201ENST00000621587 2076 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
DEFA4P12838 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
DEFA4P12838 AC006001.1-201ENST00000325130 474 ntBASIC11.52□□□□□ -0.57
DEFA4P12838 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
DEFA4P12838 GRAP-202ENST00000395635 834 ntTSL 2 BASIC11.52□□□□□ -0.57
DEFA4P12838 HNRNPA1P27-201ENST00000412087 955 ntBASIC11.52□□□□□ -0.57
DEFA4P12838 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
DEFA4P12838 HIST1H2BPS3-201ENST00000419683 341 ntBASIC11.52□□□□□ -0.57
DEFA4P12838 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
DEFA4P12838 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
DEFA4P12838 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
DEFA4P12838 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
DEFA4P12838 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC11.52□□□□□ -0.57
DEFA4P12838 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC11.52□□□□□ -0.57
DEFA4P12838 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC11.52□□□□□ -0.57
DEFA4P12838 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC11.52□□□□□ -0.57
DEFA4P12838 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC11.52□□□□□ -0.57
DEFA4P12838 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC11.52□□□□□ -0.57
DEFA4P12838 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC11.52□□□□□ -0.57
DEFA4P12838 PPY2P-201ENST00000582808 702 ntBASIC11.52□□□□□ -0.57
DEFA4P12838 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
DEFA4P12838 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC11.52□□□□□ -0.57
DEFA4P12838 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC11.52□□□□□ -0.57
DEFA4P12838 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
DEFA4P12838 CACNA1C-219ENST00000399649 6529 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
DEFA4P12838 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC11.52□□□□□ -0.57
DEFA4P12838 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC11.52□□□□□ -0.57
DEFA4P12838 BDH1-202ENST00000392378 3455 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
DEFA4P12838 EPN2-205ENST00000395626 2863 ntTSL 2 BASIC11.52□□□□□ -0.57
DEFA4P12838 NEK4-202ENST00000383721 2576 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
DEFA4P12838 CR383656.2-201ENST00000548656 2254 ntBASIC11.52□□□□□ -0.57
DEFA4P12838 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.57
DEFA4P12838 KRT8P28-201ENST00000433288 1390 ntBASIC11.52□□□□□ -0.57
DEFA4P12838 USP40-201ENST00000251722 5692 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
DEFA4P12838 GULP1-207ENST00000409843 2643 ntAPPRIS ALT1 TSL 2 BASIC11.52□□□□□ -0.57
DEFA4P12838 BIRC2-208ENST00000532672 2617 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
DEFA4P12838 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC11.52□□□□□ -0.57
DEFA4P12838 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC11.52□□□□□ -0.57
DEFA4P12838 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
DEFA4P12838 CYTH1-215ENST00000591455 3286 ntAPPRIS P3 TSL 2 BASIC11.52□□□□□ -0.57
DEFA4P12838 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
DEFA4P12838 SNRK-201ENST00000296088 5183 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
DEFA4P12838 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.57
DEFA4P12838 DCST2-202ENST00000368424 2392 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
DEFA4P12838 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC11.52□□□□□ -0.57
DEFA4P12838 CCDC117-201ENST00000249064 3985 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
DEFA4P12838 PPARGC1B-202ENST00000360453 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
DEFA4P12838 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC11.51□□□□□ -0.57
DEFA4P12838 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
DEFA4P12838 KDM7A-201ENST00000397560 9272 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
DEFA4P12838 UBE2F-223ENST00000612130 2135 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
DEFA4P12838 TFR2-205ENST00000462107 3131 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
DEFA4P12838 GUCY1B3-205ENST00000505764 2456 ntTSL 2 BASIC11.51□□□□□ -0.57
DEFA4P12838 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC11.51□□□□□ -0.57
DEFA4P12838 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
DEFA4P12838 TSC22D3-204ENST00000372384 2199 ntTSL 2 BASIC11.51□□□□□ -0.57
DEFA4P12838 TBL1X-203ENST00000407597 5596 ntTSL 2 BASIC11.51□□□□□ -0.57
DEFA4P12838 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC11.51□□□□□ -0.57
DEFA4P12838 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC11.51□□□□□ -0.57
DEFA4P12838 PCCB-210ENST00000471595 6090 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
DEFA4P12838 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
DEFA4P12838 C17orf51-201ENST00000391411 7914 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
DEFA4P12838 AP002761.4-201ENST00000565433 3361 ntBASIC11.51□□□□□ -0.57
DEFA4P12838 DNAJC3-202ENST00000602402 5591 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
DEFA4P12838 FREM3-201ENST00000329798 6729 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
DEFA4P12838 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
DEFA4P12838 GZMB-202ENST00000382540 816 ntTSL 5 BASIC11.51□□□□□ -0.57
DEFA4P12838 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC11.51□□□□□ -0.57
DEFA4P12838 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
DEFA4P12838 KLF2P4-201ENST00000451959 1225 ntBASIC11.51□□□□□ -0.57
DEFA4P12838 CICP12-201ENST00000455801 843 ntBASIC11.51□□□□□ -0.57
DEFA4P12838 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC11.51□□□□□ -0.57
DEFA4P12838 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
DEFA4P12838 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC11.51□□□□□ -0.57
DEFA4P12838 AC073413.1-201ENST00000603927 732 ntBASIC11.51□□□□□ -0.57
DEFA4P12838 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC11.51□□□□□ -0.57
DEFA4P12838 ARAP3-207ENST00000626478 4928 ntTSL 5 BASIC11.51□□□□□ -0.57
DEFA4P12838 BHLHE40-AS1-204ENST00000620618 2355 ntTSL 2 BASIC11.51□□□□□ -0.57
DEFA4P12838 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
DEFA4P12838 SFMBT2-201ENST00000361972 7922 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
DEFA4P12838 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
DEFA4P12838 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
DEFA4P12838 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC11.51□□□□□ -0.57
DEFA4P12838 SHC1P1-201ENST00000425230 1745 ntBASIC11.51□□□□□ -0.57
DEFA4P12838 ARAF-201ENST00000290277 2504 ntAPPRIS ALT1 TSL 1 (best) BASIC11.51□□□□□ -0.57
DEFA4P12838 TMOD1-201ENST00000259365 3343 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
DEFA4P12838 TRPM4-201ENST00000252826 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
DEFA4P12838 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC11.51□□□□□ -0.57
DEFA4P12838 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
DEFA4P12838 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
DEFA4P12838 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
DEFA4P12838 GOLGA6L10-209ENST00000621197 4160 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
DEFA4P12838 ABI2-213ENST00000424558 2240 ntTSL 2 BASIC11.51□□□□□ -0.57
DEFA4P12838 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
DEFA4P12838 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
DEFA4P12838 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
DEFA4P12838 EIF3C-201ENST00000331666 3145 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
DEFA4P12838 C1QTNF1-203ENST00000354124 2714 ntAPPRIS P1 TSL 4 BASIC11.51□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms