Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
TPM3P06753 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TPM3P06753 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
TPM3P06753 NHSL1-204ENST00000427025 7500 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
TPM3P06753 MDH2-203ENST00000432020 1548 ntTSL 2 BASIC15.81■□□□□ 0.12
TPM3P06753 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC15.81■□□□□ 0.12
TPM3P06753 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC15.81■□□□□ 0.12
TPM3P06753 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC15.81■□□□□ 0.12
TPM3P06753 ZNF124-202ENST00000472531 2243 ntTSL 2 BASIC15.81■□□□□ 0.12
TPM3P06753 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
TPM3P06753 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TPM3P06753 FAM90A11P-201ENST00000518378 2218 ntBASIC15.81■□□□□ 0.12
TPM3P06753 PRPF40B-209ENST00000548825 3307 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
TPM3P06753 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC15.81■□□□□ 0.12
TPM3P06753 DUT-210ENST00000559935 569 ntTSL 3 BASIC15.81■□□□□ 0.12
TPM3P06753 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC15.81■□□□□ 0.12
TPM3P06753 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
TPM3P06753 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TPM3P06753 AC004233.3-201ENST00000607794 1269 ntBASIC15.81■□□□□ 0.12
TPM3P06753 AC021016.3-201ENST00000608367 477 ntBASIC15.81■□□□□ 0.12
TPM3P06753 ABBA01031660.1-201ENST00000635219 756 ntBASIC15.81■□□□□ 0.12
TPM3P06753 ALDH7A1-234ENST00000637782 1773 ntAPPRIS ALT1 TSL 5 BASIC15.81■□□□□ 0.12
TPM3P06753 CCBE1-201ENST00000398179 5979 ntTSL 5 BASIC15.81■□□□□ 0.12
TPM3P06753 KIF21B-202ENST00000360529 5389 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TPM3P06753 PPARGC1B-202ENST00000360453 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
TPM3P06753 AC005014.1-201ENST00000432006 2976 ntBASIC15.81■□□□□ 0.12
TPM3P06753 ZNF197-204ENST00000383745 2935 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TPM3P06753 KIAA1191-202ENST00000393725 2700 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TPM3P06753 ENDOV-207ENST00000518907 2418 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TPM3P06753 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TPM3P06753 SERPINH1-205ENST00000525876 2283 ntTSL 2 BASIC15.8■□□□□ 0.12
TPM3P06753 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC15.8■□□□□ 0.12
TPM3P06753 DAB1-207ENST00000420954 1817 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TPM3P06753 SRD5A1-201ENST00000274192 7132 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TPM3P06753 NT5DC4-201ENST00000327581 1767 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TPM3P06753 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TPM3P06753 TBC1D22B-201ENST00000373491 3462 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TPM3P06753 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TPM3P06753 SNX25-201ENST00000264694 3264 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
TPM3P06753 NIPSNAP3A-201ENST00000374767 1633 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TPM3P06753 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TPM3P06753 DPP8-201ENST00000300141 3139 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TPM3P06753 PBXIP1-203ENST00000368465 3144 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
TPM3P06753 NR1H3-201ENST00000395397 1501 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TPM3P06753 ZBED8-201ENST00000408953 2851 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
TPM3P06753 ST8SIA1-203ENST00000396037 9714 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TPM3P06753 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC15.8■□□□□ 0.12
TPM3P06753 DLGAP3-202ENST00000373347 3856 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
TPM3P06753 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TPM3P06753 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TPM3P06753 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TPM3P06753 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TPM3P06753 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TPM3P06753 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TPM3P06753 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
TPM3P06753 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
TPM3P06753 CD8B2-202ENST00000417670 633 ntBASIC15.8■□□□□ 0.12
TPM3P06753 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC15.8■□□□□ 0.12
TPM3P06753 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TPM3P06753 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC15.8■□□□□ 0.12
TPM3P06753 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
TPM3P06753 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC15.8■□□□□ 0.12
TPM3P06753 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC15.8■□□□□ 0.12
TPM3P06753 AQP6-203ENST00000551733 849 ntTSL 3 BASIC15.8■□□□□ 0.12
TPM3P06753 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC15.8■□□□□ 0.12
TPM3P06753 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC15.8■□□□□ 0.12
TPM3P06753 AC132938.4-201ENST00000623835 848 ntBASIC15.8■□□□□ 0.12
TPM3P06753 NEU3-204ENST00000531509 2468 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TPM3P06753 IKBKE-201ENST00000578328 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
TPM3P06753 ZNF774-201ENST00000354377 3202 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TPM3P06753 TUBB8P7-202ENST00000564451 2115 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TPM3P06753 AC134407.3-201ENST00000624035 2139 ntBASIC15.8■□□□□ 0.12
TPM3P06753 SLC25A17-217ENST00000544408 2060 ntTSL 2 BASIC15.8■□□□□ 0.12
TPM3P06753 MYRIP-203ENST00000425621 2981 ntTSL 2 BASIC15.8■□□□□ 0.12
TPM3P06753 TNPO2-218ENST00000592287 2914 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
TPM3P06753 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC15.8■□□□□ 0.12
TPM3P06753 ZNF239-205ENST00000535642 1904 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
TPM3P06753 DRG2-202ENST00000395726 1897 ntTSL 5 BASIC15.8■□□□□ 0.12
TPM3P06753 HPSE-201ENST00000311412 4615 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TPM3P06753 CACNA1C-209ENST00000399603 7377 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
TPM3P06753 CEP131-201ENST00000269392 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
TPM3P06753 ABCA2-202ENST00000341511 8063 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
TPM3P06753 LINC00343-203ENST00000454555 1765 ntTSL 2 BASIC15.8■□□□□ 0.12
TPM3P06753 NRROS-201ENST00000328557 2564 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TPM3P06753 KCNJ5-202ENST00000529694 5940 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TPM3P06753 DSN1-204ENST00000426836 2441 ntAPPRIS P3 TSL 2 BASIC15.79■□□□□ 0.12
TPM3P06753 IKBKB-218ENST00000520835 2403 ntTSL 2 BASIC15.79■□□□□ 0.12
TPM3P06753 DHX30-201ENST00000348968 3994 ntTSL 5 BASIC15.79■□□□□ 0.12
TPM3P06753 PRR3-202ENST00000376560 2254 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TPM3P06753 NCBP1-202ENST00000375147 5178 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TPM3P06753 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
TPM3P06753 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TPM3P06753 LAP3P2-201ENST00000454686 1454 ntBASIC15.79■□□□□ 0.12
TPM3P06753 KCNIP3-202ENST00000360990 2798 ntTSL 5 BASIC15.79■□□□□ 0.12
TPM3P06753 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TPM3P06753 NCDN-201ENST00000356090 3433 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TPM3P06753 OPLAH-204ENST00000618853 4031 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TPM3P06753 CCDC117-201ENST00000249064 3985 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TPM3P06753 INCENP-202ENST00000394818 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
TPM3P06753 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 67.5 ms