Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 AP000911.2-201ENST00000534330 502 ntBASIC14.17□□□□□ -0.14
KDELR3O43731 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
KDELR3O43731 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC14.17□□□□□ -0.14
KDELR3O43731 MIR3940-201ENST00000579148 102 ntBASIC14.17□□□□□ -0.14
KDELR3O43731 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC14.17□□□□□ -0.14
KDELR3O43731 AC073352.2-201ENST00000609385 439 ntBASIC14.17□□□□□ -0.14
KDELR3O43731 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
KDELR3O43731 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
KDELR3O43731 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
KDELR3O43731 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
KDELR3O43731 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
KDELR3O43731 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
KDELR3O43731 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC14.17□□□□□ -0.14
KDELR3O43731 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC14.17□□□□□ -0.14
KDELR3O43731 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
KDELR3O43731 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
KDELR3O43731 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
KDELR3O43731 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
KDELR3O43731 LILRB2-202ENST00000391746 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
KDELR3O43731 HSPA6-201ENST00000309758 2371 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
KDELR3O43731 TMEM9-203ENST00000367333 1564 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
KDELR3O43731 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
KDELR3O43731 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
KDELR3O43731 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
KDELR3O43731 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
KDELR3O43731 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
KDELR3O43731 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
KDELR3O43731 SNAPC2-206ENST00000597584 1413 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
KDELR3O43731 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
KDELR3O43731 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
KDELR3O43731 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC14.16□□□□□ -0.14
KDELR3O43731 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
KDELR3O43731 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
KDELR3O43731 ANKDD1A-202ENST00000395720 1518 ntTSL 5 BASIC14.16□□□□□ -0.14
KDELR3O43731 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
KDELR3O43731 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
KDELR3O43731 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
KDELR3O43731 ABCF3-201ENST00000292808 2453 ntAPPRIS ALT1 TSL 2 BASIC14.16□□□□□ -0.14
KDELR3O43731 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
KDELR3O43731 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
KDELR3O43731 LY86-201ENST00000230568 559 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
KDELR3O43731 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
KDELR3O43731 MED11-201ENST00000293777 833 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
KDELR3O43731 AURKB-201ENST00000316199 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
KDELR3O43731 TMSB4X-202ENST00000380635 767 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
KDELR3O43731 Z69890.1-201ENST00000382990 339 ntBASIC14.16□□□□□ -0.14
KDELR3O43731 GGCT-203ENST00000409144 836 ntTSL 2 BASIC14.16□□□□□ -0.14
KDELR3O43731 RN7SKP109-201ENST00000410592 316 ntBASIC14.16□□□□□ -0.14
KDELR3O43731 HIST2H2BA-201ENST00000412169 381 ntBASIC14.16□□□□□ -0.14
KDELR3O43731 OR52M2P-201ENST00000414298 959 ntBASIC14.16□□□□□ -0.14
KDELR3O43731 LTF-202ENST00000417439 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
KDELR3O43731 AC069218.1-201ENST00000435269 762 ntBASIC14.16□□□□□ -0.14
KDELR3O43731 AL365295.1-203ENST00000435322 566 ntTSL 4 BASIC14.16□□□□□ -0.14
KDELR3O43731 AL663074.1-201ENST00000436642 299 ntTSL 3 BASIC14.16□□□□□ -0.14
KDELR3O43731 CSNK1G2P1-201ENST00000442675 955 ntBASIC14.16□□□□□ -0.14
KDELR3O43731 AL512330.1-201ENST00000456701 349 ntTSL 3 BASIC14.16□□□□□ -0.14
KDELR3O43731 RAMP3-203ENST00000496212 543 ntAPPRIS ALT2 TSL 4 BASIC14.16□□□□□ -0.14
KDELR3O43731 ADM-203ENST00000525063 867 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
KDELR3O43731 NEU3-207ENST00000534628 746 ntTSL 2 BASIC14.16□□□□□ -0.14
KDELR3O43731 ANAPC15-204ENST00000535234 848 ntAPPRIS P3 TSL 2 BASIC14.16□□□□□ -0.14
KDELR3O43731 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
KDELR3O43731 LINC02176-201ENST00000569104 598 ntTSL 4 BASIC14.16□□□□□ -0.14
KDELR3O43731 JPT2-214ENST00000569765 782 ntTSL 2 BASIC14.16□□□□□ -0.14
KDELR3O43731 AC007952.4-201ENST00000573866 637 ntBASIC14.16□□□□□ -0.14
KDELR3O43731 MIR3180-2-201ENST00000581748 88 ntBASIC14.16□□□□□ -0.14
KDELR3O43731 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC14.16□□□□□ -0.14
KDELR3O43731 ZNF530-203ENST00000597864 634 ntTSL 2 BASIC14.16□□□□□ -0.14
KDELR3O43731 AC008982.2-201ENST00000600473 493 ntTSL 5 BASIC14.16□□□□□ -0.14
KDELR3O43731 AL356740.1-201ENST00000602192 1297 ntBASIC14.16□□□□□ -0.14
KDELR3O43731 AC087045.2-201ENST00000606279 1003 ntBASIC14.16□□□□□ -0.14
KDELR3O43731 AL009176.1-201ENST00000607876 650 ntBASIC14.16□□□□□ -0.14
KDELR3O43731 MIR6842-201ENST00000612539 65 ntBASIC14.16□□□□□ -0.14
KDELR3O43731 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
KDELR3O43731 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
KDELR3O43731 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
KDELR3O43731 MORN4-201ENST00000307450 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
KDELR3O43731 GGA1-201ENST00000325180 2528 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
KDELR3O43731 RNF123-203ENST00000433785 1555 ntTSL 5 BASIC14.16□□□□□ -0.14
KDELR3O43731 ERICH1-206ENST00000522706 1551 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
KDELR3O43731 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC14.16□□□□□ -0.14
KDELR3O43731 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC14.16□□□□□ -0.14
KDELR3O43731 AC020917.4-201ENST00000623994 1999 ntBASIC14.16□□□□□ -0.14
KDELR3O43731 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
KDELR3O43731 CWC27-201ENST00000381070 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
KDELR3O43731 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
KDELR3O43731 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC14.16□□□□□ -0.14
KDELR3O43731 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC14.16□□□□□ -0.14
KDELR3O43731 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC14.16□□□□□ -0.14
KDELR3O43731 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC14.16□□□□□ -0.14
KDELR3O43731 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC14.16□□□□□ -0.14
KDELR3O43731 RELL1-201ENST00000314117 1326 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
KDELR3O43731 C12orf65-204ENST00000429587 1326 ntAPPRIS P2 TSL 2 BASIC14.15□□□□□ -0.14
KDELR3O43731 CNBP-205ENST00000500450 1516 ntTSL 2 BASIC14.15□□□□□ -0.14
KDELR3O43731 ABCD1P2-201ENST00000429313 1601 ntBASIC14.15□□□□□ -0.14
KDELR3O43731 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
KDELR3O43731 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC14.15□□□□□ -0.14
KDELR3O43731 CCNE2-201ENST00000308108 2724 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
KDELR3O43731 AC020763.3-201ENST00000625095 2904 ntBASIC14.15□□□□□ -0.14
KDELR3O43731 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC14.15□□□□□ -0.14
KDELR3O43731 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms