Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC14.19□□□□□ -0.14
PCDHGC4Q9Y5F7 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC14.19□□□□□ -0.14
PCDHGC4Q9Y5F7 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC14.19□□□□□ -0.14
PCDHGC4Q9Y5F7 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC14.19□□□□□ -0.14
PCDHGC4Q9Y5F7 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC14.18□□□□□ -0.14
PCDHGC4Q9Y5F7 UBE2V1-224ENST00000625172 2297 ntTSL 4 BASIC14.18□□□□□ -0.14
PCDHGC4Q9Y5F7 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
PCDHGC4Q9Y5F7 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PCDHGC4Q9Y5F7 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PCDHGC4Q9Y5F7 TUBB4AP1-201ENST00000450755 1325 ntBASIC14.18□□□□□ -0.14
PCDHGC4Q9Y5F7 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PCDHGC4Q9Y5F7 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC14.18□□□□□ -0.14
PCDHGC4Q9Y5F7 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC14.18□□□□□ -0.14
PCDHGC4Q9Y5F7 GPNMB-203ENST00000409458 1673 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
PCDHGC4Q9Y5F7 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC14.18□□□□□ -0.14
PCDHGC4Q9Y5F7 GFPT2-201ENST00000253778 3093 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PCDHGC4Q9Y5F7 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
PCDHGC4Q9Y5F7 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PCDHGC4Q9Y5F7 CST5-201ENST00000304710 756 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PCDHGC4Q9Y5F7 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC14.18□□□□□ -0.14
PCDHGC4Q9Y5F7 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PCDHGC4Q9Y5F7 GULP1-204ENST00000409637 1242 ntTSL 2 BASIC14.18□□□□□ -0.14
PCDHGC4Q9Y5F7 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC14.18□□□□□ -0.14
PCDHGC4Q9Y5F7 FLJ37035-201ENST00000419400 446 ntTSL 3 BASIC14.18□□□□□ -0.14
PCDHGC4Q9Y5F7 AL513211.1-201ENST00000429053 483 ntTSL 3 BASIC14.18□□□□□ -0.14
PCDHGC4Q9Y5F7 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC14.18□□□□□ -0.14
PCDHGC4Q9Y5F7 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC14.18□□□□□ -0.14
PCDHGC4Q9Y5F7 SEC61B-203ENST00000498603 587 ntTSL 3 BASIC14.18□□□□□ -0.14
PCDHGC4Q9Y5F7 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC14.18□□□□□ -0.14
PCDHGC4Q9Y5F7 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
PCDHGC4Q9Y5F7 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC14.18□□□□□ -0.14
PCDHGC4Q9Y5F7 RHOQP1-201ENST00000555758 579 ntBASIC14.18□□□□□ -0.14
PCDHGC4Q9Y5F7 RN7SL665P-201ENST00000578793 300 ntBASIC14.18□□□□□ -0.14
PCDHGC4Q9Y5F7 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
PCDHGC4Q9Y5F7 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC14.18□□□□□ -0.14
PCDHGC4Q9Y5F7 AC084346.2-201ENST00000607097 949 ntBASIC14.18□□□□□ -0.14
PCDHGC4Q9Y5F7 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC14.18□□□□□ -0.14
PCDHGC4Q9Y5F7 AC006213.4-201ENST00000616184 634 ntBASIC14.18□□□□□ -0.14
PCDHGC4Q9Y5F7 AP001002.2-201ENST00000625137 386 ntBASIC14.18□□□□□ -0.14
PCDHGC4Q9Y5F7 AL121956.4-201ENST00000629925 581 ntTSL 5 BASIC14.18□□□□□ -0.14
PCDHGC4Q9Y5F7 MEX3B-202ENST00000558133 4333 ntBASIC14.18□□□□□ -0.14
PCDHGC4Q9Y5F7 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
PCDHGC4Q9Y5F7 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
PCDHGC4Q9Y5F7 MSRA-201ENST00000317173 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PCDHGC4Q9Y5F7 TMEM145-203ENST00000598766 2011 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
PCDHGC4Q9Y5F7 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
PCDHGC4Q9Y5F7 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
PCDHGC4Q9Y5F7 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
PCDHGC4Q9Y5F7 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PCDHGC4Q9Y5F7 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC14.18□□□□□ -0.14
PCDHGC4Q9Y5F7 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
PCDHGC4Q9Y5F7 PSKH1-201ENST00000291041 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PCDHGC4Q9Y5F7 AC089987.1-201ENST00000551654 2209 ntBASIC14.18□□□□□ -0.14
PCDHGC4Q9Y5F7 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC14.18□□□□□ -0.14
PCDHGC4Q9Y5F7 CETP-203ENST00000566128 1733 ntTSL 5 BASIC14.18□□□□□ -0.14
PCDHGC4Q9Y5F7 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
PCDHGC4Q9Y5F7 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC14.18□□□□□ -0.14
PCDHGC4Q9Y5F7 AC004554.1-201ENST00000422830 1468 ntBASIC14.18□□□□□ -0.14
PCDHGC4Q9Y5F7 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PCDHGC4Q9Y5F7 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
PCDHGC4Q9Y5F7 CAMKV-201ENST00000296471 2913 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
PCDHGC4Q9Y5F7 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PCDHGC4Q9Y5F7 AC092053.3-201ENST00000641308 4975 ntBASIC14.17□□□□□ -0.14
PCDHGC4Q9Y5F7 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PCDHGC4Q9Y5F7 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
PCDHGC4Q9Y5F7 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
PCDHGC4Q9Y5F7 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
PCDHGC4Q9Y5F7 TEKT4P2-202ENST00000559466 1312 ntBASIC14.17□□□□□ -0.14
PCDHGC4Q9Y5F7 BEND3P1-201ENST00000421591 1944 ntBASIC14.17□□□□□ -0.14
PCDHGC4Q9Y5F7 SLC47A1-206ENST00000571335 1415 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
PCDHGC4Q9Y5F7 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PCDHGC4Q9Y5F7 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PCDHGC4Q9Y5F7 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
PCDHGC4Q9Y5F7 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
PCDHGC4Q9Y5F7 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
PCDHGC4Q9Y5F7 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PCDHGC4Q9Y5F7 AC006372.4-201ENST00000624122 1543 ntBASIC14.17□□□□□ -0.14
PCDHGC4Q9Y5F7 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
PCDHGC4Q9Y5F7 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
PCDHGC4Q9Y5F7 FMO6P-201ENST00000236166 1620 ntBASIC14.17□□□□□ -0.14
PCDHGC4Q9Y5F7 GOT2-202ENST00000434819 1615 ntTSL 2 BASIC14.17□□□□□ -0.14
PCDHGC4Q9Y5F7 CNBP-203ENST00000446936 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PCDHGC4Q9Y5F7 CNBP-204ENST00000451728 1641 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
PCDHGC4Q9Y5F7 C19orf33-201ENST00000301246 467 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
PCDHGC4Q9Y5F7 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PCDHGC4Q9Y5F7 AC091046.1-201ENST00000331871 207 ntBASIC14.17□□□□□ -0.14
PCDHGC4Q9Y5F7 FAM163B-201ENST00000356873 1131 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PCDHGC4Q9Y5F7 TCEA3-201ENST00000374601 1197 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
PCDHGC4Q9Y5F7 NPPA-202ENST00000376480 855 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
PCDHGC4Q9Y5F7 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC14.17□□□□□ -0.14
PCDHGC4Q9Y5F7 PPP1R2P4-201ENST00000424051 595 ntBASIC14.17□□□□□ -0.14
PCDHGC4Q9Y5F7 AC108462.1-201ENST00000457467 850 ntTSL 3 BASIC14.17□□□□□ -0.14
PCDHGC4Q9Y5F7 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
PCDHGC4Q9Y5F7 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC14.17□□□□□ -0.14
PCDHGC4Q9Y5F7 AC022182.2-201ENST00000525556 859 ntTSL 2 BASIC14.17□□□□□ -0.14
PCDHGC4Q9Y5F7 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
PCDHGC4Q9Y5F7 SERGEF-208ENST00000528200 1264 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
PCDHGC4Q9Y5F7 NEU3-205ENST00000531619 582 ntTSL 5 BASIC14.17□□□□□ -0.14
PCDHGC4Q9Y5F7 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
PCDHGC4Q9Y5F7 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC14.17□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 74.6 ms