Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 AF274856.1-202ENST00000509345 871 ntTSL 4 BASIC20.18■□□□□ 0.82
SHANK2Q9UPX8 AP001094.3-201ENST00000580491 616 ntTSL 2 BASIC20.18■□□□□ 0.82
SHANK2Q9UPX8 KRTAP10-4-202ENST00000616689 597 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
SHANK2Q9UPX8 ALDOA-229ENST00000636698 420 ntTSL 3 BASIC20.18■□□□□ 0.82
SHANK2Q9UPX8 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SHANK2Q9UPX8 C22orf42-201ENST00000382097 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SHANK2Q9UPX8 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
SHANK2Q9UPX8 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC20.17■□□□□ 0.82
SHANK2Q9UPX8 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
SHANK2Q9UPX8 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
SHANK2Q9UPX8 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC20.17■□□□□ 0.82
SHANK2Q9UPX8 AL359845.1-201ENST00000458202 1648 ntBASIC20.17■□□□□ 0.82
SHANK2Q9UPX8 TRAIP-201ENST00000331456 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SHANK2Q9UPX8 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
SHANK2Q9UPX8 CCDC178-201ENST00000300227 3087 ntAPPRIS P3 TSL 2 BASIC20.17■□□□□ 0.82
SHANK2Q9UPX8 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
SHANK2Q9UPX8 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC20.17■□□□□ 0.82
SHANK2Q9UPX8 HIST2H2BE-201ENST00000369155 2194 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
SHANK2Q9UPX8 APEX1-201ENST00000216714 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SHANK2Q9UPX8 DRD2-204ENST00000538967 1493 ntAPPRIS ALT1 TSL 5 BASIC20.17■□□□□ 0.82
SHANK2Q9UPX8 ARR3-201ENST00000307959 1292 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
SHANK2Q9UPX8 AIFM1-203ENST00000346424 1200 ntTSL 2 BASIC20.17■□□□□ 0.82
SHANK2Q9UPX8 TXLNGY-202ENST00000407724 1000 ntTSL 3 BASIC20.17■□□□□ 0.82
SHANK2Q9UPX8 AC114781.1-201ENST00000450559 1028 ntBASIC20.17■□□□□ 0.82
SHANK2Q9UPX8 AC026412.1-206ENST00000502273 206 ntBASIC20.17■□□□□ 0.82
SHANK2Q9UPX8 AC114812.4-201ENST00000506676 757 ntBASIC20.17■□□□□ 0.82
SHANK2Q9UPX8 EEF1DP7-201ENST00000580496 513 ntBASIC20.17■□□□□ 0.82
SHANK2Q9UPX8 OR5L1-201ENST00000625203 1110 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
SHANK2Q9UPX8 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
SHANK2Q9UPX8 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SHANK2Q9UPX8 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC20.17■□□□□ 0.82
SHANK2Q9UPX8 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SHANK2Q9UPX8 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SHANK2Q9UPX8 SEC13-209ENST00000397117 1603 ntTSL 5 BASIC20.16■□□□□ 0.82
SHANK2Q9UPX8 AC099063.4-201ENST00000641099 1602 ntBASIC20.16■□□□□ 0.82
SHANK2Q9UPX8 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SHANK2Q9UPX8 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
SHANK2Q9UPX8 ZNF33A-205ENST00000469037 1530 ntTSL 5 BASIC20.16■□□□□ 0.82
SHANK2Q9UPX8 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
SHANK2Q9UPX8 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SHANK2Q9UPX8 FGF21-202ENST00000593756 1312 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SHANK2Q9UPX8 ALDOA-213ENST00000564595 1663 ntTSL 2 BASIC20.16■□□□□ 0.82
SHANK2Q9UPX8 TMUB2-205ENST00000587172 1598 ntTSL 2 BASIC20.16■□□□□ 0.82
SHANK2Q9UPX8 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC20.16■□□□□ 0.82
SHANK2Q9UPX8 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
SHANK2Q9UPX8 IL18BP-201ENST00000260049 1354 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
SHANK2Q9UPX8 CHRNA2-207ENST00000520933 2497 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
SHANK2Q9UPX8 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC20.16■□□□□ 0.82
SHANK2Q9UPX8 ALG6-202ENST00000371108 3371 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
SHANK2Q9UPX8 ATXN3-201ENST00000340660 1205 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SHANK2Q9UPX8 WFDC2-203ENST00000342873 818 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SHANK2Q9UPX8 PMF1-203ENST00000368279 1019 ntTSL 2 BASIC20.16■□□□□ 0.82
SHANK2Q9UPX8 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
SHANK2Q9UPX8 RBMXP1-201ENST00000408004 1191 ntBASIC20.16■□□□□ 0.82
SHANK2Q9UPX8 DNM1P46-202ENST00000415963 882 ntBASIC20.16■□□□□ 0.82
SHANK2Q9UPX8 AC006328.1-201ENST00000437571 379 ntBASIC20.16■□□□□ 0.82
SHANK2Q9UPX8 AL162377.1-202ENST00000456688 1181 ntTSL 2 BASIC20.16■□□□□ 0.82
SHANK2Q9UPX8 BICD1P1-201ENST00000457832 1222 ntBASIC20.16■□□□□ 0.82
SHANK2Q9UPX8 TPT1P6-201ENST00000458298 514 ntBASIC20.16■□□□□ 0.82
SHANK2Q9UPX8 CTB-178M22.2-201ENST00000519795 503 ntTSL 4 BASIC20.16■□□□□ 0.82
SHANK2Q9UPX8 C12orf73-204ENST00000546819 582 ntTSL 4 BASIC20.16■□□□□ 0.82
SHANK2Q9UPX8 AC009041.4-201ENST00000620075 638 ntBASIC20.16■□□□□ 0.82
SHANK2Q9UPX8 AC005609.5-201ENST00000624712 1053 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SHANK2Q9UPX8 GTF3A-209ENST00000640289 1098 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
SHANK2Q9UPX8 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SHANK2Q9UPX8 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SHANK2Q9UPX8 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SHANK2Q9UPX8 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
SHANK2Q9UPX8 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC20.16■□□□□ 0.82
SHANK2Q9UPX8 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SHANK2Q9UPX8 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
SHANK2Q9UPX8 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC20.15■□□□□ 0.82
SHANK2Q9UPX8 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
SHANK2Q9UPX8 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC20.15■□□□□ 0.82
SHANK2Q9UPX8 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SHANK2Q9UPX8 AC008038.1-201ENST00000634247 1314 ntBASIC20.15■□□□□ 0.82
SHANK2Q9UPX8 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
SHANK2Q9UPX8 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SHANK2Q9UPX8 TMPRSS4-213ENST00000522824 2052 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
SHANK2Q9UPX8 AC009093.1-201ENST00000566070 2099 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SHANK2Q9UPX8 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
SHANK2Q9UPX8 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SHANK2Q9UPX8 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC20.15■□□□□ 0.82
SHANK2Q9UPX8 ZNF595-203ENST00000608255 1999 ntTSL 2 BASIC20.15■□□□□ 0.82
SHANK2Q9UPX8 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SHANK2Q9UPX8 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SHANK2Q9UPX8 GAST-201ENST00000329402 470 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SHANK2Q9UPX8 OR2W3-201ENST00000360358 945 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
SHANK2Q9UPX8 CMTM5-204ENST00000382809 378 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SHANK2Q9UPX8 AL359092.2-201ENST00000423330 585 ntBASIC20.15■□□□□ 0.82
SHANK2Q9UPX8 KCNMA1-AS1-201ENST00000426234 863 ntTSL 5 BASIC20.15■□□□□ 0.82
SHANK2Q9UPX8 KCNK15-AS1-202ENST00000427303 528 ntTSL 5 BASIC20.15■□□□□ 0.82
SHANK2Q9UPX8 KRT19P4-201ENST00000443208 943 ntBASIC20.15■□□□□ 0.82
SHANK2Q9UPX8 TGFA-206ENST00000445399 812 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SHANK2Q9UPX8 ZFP1-207ENST00000567481 493 ntTSL 4 BASIC20.15■□□□□ 0.82
SHANK2Q9UPX8 AC091807.1-201ENST00000418838 1544 ntBASIC20.15■□□□□ 0.82
SHANK2Q9UPX8 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SHANK2Q9UPX8 SEPT10-208ENST00000437928 1782 ntTSL 5 BASIC20.15■□□□□ 0.82
SHANK2Q9UPX8 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
SHANK2Q9UPX8 MANEA-AS1-201ENST00000564541 2268 ntBASIC20.15■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms