Protein–RNA interactions for Protein: Q9UMS6

SYNPO2, Synaptopodin-2, humanhuman

Predictions only

Length 1,093 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2Q9UMS6 HSPA8-221ENST00000533540 1826 ntTSL 5 BASIC15.91■□□□□ 0.14
SYNPO2Q9UMS6 ERCC4-207ENST00000575156 2073 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SYNPO2Q9UMS6 FAM156A-208ENST00000615092 2098 ntAPPRIS P2 TSL 5 BASIC15.91■□□□□ 0.14
SYNPO2Q9UMS6 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC15.91■□□□□ 0.14
SYNPO2Q9UMS6 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SYNPO2Q9UMS6 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SYNPO2Q9UMS6 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SYNPO2Q9UMS6 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SYNPO2Q9UMS6 ATP6V1C1-205ENST00000521514 1484 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SYNPO2Q9UMS6 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
SYNPO2Q9UMS6 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SYNPO2Q9UMS6 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
SYNPO2Q9UMS6 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC15.91■□□□□ 0.14
SYNPO2Q9UMS6 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SYNPO2Q9UMS6 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
SYNPO2Q9UMS6 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SYNPO2Q9UMS6 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
SYNPO2Q9UMS6 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC15.91■□□□□ 0.14
SYNPO2Q9UMS6 C11orf53-201ENST00000280325 1208 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
SYNPO2Q9UMS6 GEMIN8P4-201ENST00000380526 729 ntBASIC15.91■□□□□ 0.14
SYNPO2Q9UMS6 CHEK2-203ENST00000382565 696 ntTSL 5 BASIC15.91■□□□□ 0.14
SYNPO2Q9UMS6 MRPS12-202ENST00000402029 929 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SYNPO2Q9UMS6 OR7E155P-201ENST00000412208 1014 ntBASIC15.91■□□□□ 0.14
SYNPO2Q9UMS6 IQCF4-202ENST00000422896 745 ntTSL 2 BASIC15.91■□□□□ 0.14
SYNPO2Q9UMS6 HCG27-204ENST00000424675 895 ntTSL 3 BASIC15.91■□□□□ 0.14
SYNPO2Q9UMS6 AC092810.2-201ENST00000431570 362 ntBASIC15.91■□□□□ 0.14
SYNPO2Q9UMS6 AL359979.2-201ENST00000435108 613 ntTSL 3 BASIC15.91■□□□□ 0.14
SYNPO2Q9UMS6 AL157392.3-204ENST00000440878 397 ntTSL 3 BASIC15.91■□□□□ 0.14
SYNPO2Q9UMS6 AL451000.1-201ENST00000451300 1186 ntBASIC15.91■□□□□ 0.14
SYNPO2Q9UMS6 AL355537.2-201ENST00000453367 375 ntTSL 2 BASIC15.91■□□□□ 0.14
SYNPO2Q9UMS6 TP53AIP1-201ENST00000458238 777 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
SYNPO2Q9UMS6 AC092903.1-201ENST00000466506 262 ntBASIC15.91■□□□□ 0.14
SYNPO2Q9UMS6 LINC00301-203ENST00000527161 749 ntTSL 2 BASIC15.91■□□□□ 0.14
SYNPO2Q9UMS6 AP003168.2-201ENST00000531215 471 ntTSL 3 BASIC15.91■□□□□ 0.14
SYNPO2Q9UMS6 AC092862.1-201ENST00000541534 533 ntBASIC15.91■□□□□ 0.14
SYNPO2Q9UMS6 LINC01481-204ENST00000550216 494 ntTSL 2 BASIC15.91■□□□□ 0.14
SYNPO2Q9UMS6 AL139316.1-201ENST00000555643 568 ntTSL 3 BASIC15.91■□□□□ 0.14
SYNPO2Q9UMS6 AC012174.1-201ENST00000562349 714 ntTSL 3 BASIC15.91■□□□□ 0.14
SYNPO2Q9UMS6 JPT2-214ENST00000569765 782 ntTSL 2 BASIC15.91■□□□□ 0.14
SYNPO2Q9UMS6 RN7SL134P-201ENST00000579756 303 ntBASIC15.91■□□□□ 0.14
SYNPO2Q9UMS6 C19orf53-202ENST00000588234 873 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SYNPO2Q9UMS6 FAAP24-203ENST00000589646 836 ntTSL 3 BASIC15.91■□□□□ 0.14
SYNPO2Q9UMS6 AC005357.2-202ENST00000590507 1060 ntBASIC15.91■□□□□ 0.14
SYNPO2Q9UMS6 ZNF586-204ENST00000598183 603 ntTSL 5 BASIC15.91■□□□□ 0.14
SYNPO2Q9UMS6 LINC01002-234ENST00000633808 848 ntTSL 5 BASIC15.91■□□□□ 0.14
SYNPO2Q9UMS6 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SYNPO2Q9UMS6 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SYNPO2Q9UMS6 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SYNPO2Q9UMS6 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SYNPO2Q9UMS6 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SYNPO2Q9UMS6 AP3M2-202ENST00000396926 3545 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SYNPO2Q9UMS6 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC15.91■□□□□ 0.14
SYNPO2Q9UMS6 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC15.91■□□□□ 0.14
SYNPO2Q9UMS6 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC15.91■□□□□ 0.14
SYNPO2Q9UMS6 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
SYNPO2Q9UMS6 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SYNPO2Q9UMS6 FSTL4-207ENST00000621681 2660 ntTSL 5 BASIC15.91■□□□□ 0.14
SYNPO2Q9UMS6 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SYNPO2Q9UMS6 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SYNPO2Q9UMS6 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC15.9■□□□□ 0.14
SYNPO2Q9UMS6 AP002414.2-201ENST00000591780 3365 ntBASIC15.9■□□□□ 0.14
SYNPO2Q9UMS6 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SYNPO2Q9UMS6 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC15.9■□□□□ 0.14
SYNPO2Q9UMS6 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SYNPO2Q9UMS6 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
SYNPO2Q9UMS6 DANT2-201ENST00000430756 2079 ntTSL 3 BASIC15.9■□□□□ 0.14
SYNPO2Q9UMS6 MRPS9-201ENST00000258455 1500 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SYNPO2Q9UMS6 PCK2-208ENST00000559250 1804 ntTSL 5 BASIC15.9■□□□□ 0.14
SYNPO2Q9UMS6 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SYNPO2Q9UMS6 TNNT3-201ENST00000278317 1210 ntAPPRIS P3 TSL 5 BASIC15.9■□□□□ 0.14
SYNPO2Q9UMS6 CALML6-201ENST00000307786 1101 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
SYNPO2Q9UMS6 SH3BGRL3-202ENST00000319041 768 ntTSL 2 BASIC15.9■□□□□ 0.14
SYNPO2Q9UMS6 DHRS7C-201ENST00000330255 1006 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
SYNPO2Q9UMS6 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
SYNPO2Q9UMS6 SIRPB3P-201ENST00000340424 1216 ntBASIC15.9■□□□□ 0.14
SYNPO2Q9UMS6 APOD-201ENST00000343267 1130 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
SYNPO2Q9UMS6 RHOC-205ENST00000369636 786 ntTSL 2 BASIC15.9■□□□□ 0.14
SYNPO2Q9UMS6 RHOC-207ENST00000369638 1028 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
SYNPO2Q9UMS6 TNNT3-207ENST00000381589 1060 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
SYNPO2Q9UMS6 LRRC3-AS1-201ENST00000426578 784 ntTSL 3 BASIC15.9■□□□□ 0.14
SYNPO2Q9UMS6 EMP1-203ENST00000431267 1039 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SYNPO2Q9UMS6 AC019118.1-201ENST00000454530 435 ntTSL 3 BASIC15.9■□□□□ 0.14
SYNPO2Q9UMS6 AC063952.3-201ENST00000467756 308 ntBASIC15.9■□□□□ 0.14
SYNPO2Q9UMS6 RN7SL147P-201ENST00000487345 298 ntBASIC15.9■□□□□ 0.14
SYNPO2Q9UMS6 AC106047.2-201ENST00000511723 743 ntBASIC15.9■□□□□ 0.14
SYNPO2Q9UMS6 UBR5-AS1-202ENST00000520820 800 ntTSL 2 BASIC15.9■□□□□ 0.14
SYNPO2Q9UMS6 PTK2-225ENST00000520892 571 ntTSL 4 BASIC15.9■□□□□ 0.14
SYNPO2Q9UMS6 DNAJB13-203ENST00000537753 912 ntTSL 3 BASIC15.9■□□□□ 0.14
SYNPO2Q9UMS6 ORAOV1-209ENST00000538554 1000 ntTSL 2 BASIC15.9■□□□□ 0.14
SYNPO2Q9UMS6 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SYNPO2Q9UMS6 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SYNPO2Q9UMS6 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SYNPO2Q9UMS6 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SYNPO2Q9UMS6 LINC01922-202ENST00000567168 1704 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SYNPO2Q9UMS6 MAP2K3-214ENST00000613338 2029 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SYNPO2Q9UMS6 C12orf76-207ENST00000549724 1302 ntTSL 5 BASIC15.9■□□□□ 0.14
SYNPO2Q9UMS6 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SYNPO2Q9UMS6 SRP9-201ENST00000304786 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SYNPO2Q9UMS6 FAM168A-202ENST00000356467 1767 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SYNPO2Q9UMS6 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms