Protein–RNA interactions for Protein: Q9UBC3

DNMT3B, DNA (cytosine-5)-methyltransferase 3B, humanhuman

Known RBP Predictions only

Length 853 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3BQ9UBC3 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
DNMT3BQ9UBC3 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
DNMT3BQ9UBC3 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
DNMT3BQ9UBC3 USP28-214ENST00000545540 3431 ntTSL 2 BASIC14.53□□□□□ -0.08
DNMT3BQ9UBC3 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC14.53□□□□□ -0.08
DNMT3BQ9UBC3 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
DNMT3BQ9UBC3 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
DNMT3BQ9UBC3 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
DNMT3BQ9UBC3 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC14.52□□□□□ -0.08
DNMT3BQ9UBC3 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
DNMT3BQ9UBC3 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
DNMT3BQ9UBC3 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
DNMT3BQ9UBC3 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC14.52□□□□□ -0.08
DNMT3BQ9UBC3 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.08
DNMT3BQ9UBC3 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
DNMT3BQ9UBC3 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
DNMT3BQ9UBC3 TMEM56-RWDD3-202ENST00000604534 1491 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
DNMT3BQ9UBC3 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
DNMT3BQ9UBC3 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
DNMT3BQ9UBC3 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
DNMT3BQ9UBC3 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
DNMT3BQ9UBC3 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC14.52□□□□□ -0.08
DNMT3BQ9UBC3 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
DNMT3BQ9UBC3 HIST1H2BK-201ENST00000356950 381 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
DNMT3BQ9UBC3 RHOC-205ENST00000369636 786 ntTSL 2 BASIC14.52□□□□□ -0.09
DNMT3BQ9UBC3 RHOC-207ENST00000369638 1028 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
DNMT3BQ9UBC3 LST1-204ENST00000376086 554 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
DNMT3BQ9UBC3 EFNA4-203ENST00000427683 1052 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
DNMT3BQ9UBC3 AL157392.3-204ENST00000440878 397 ntTSL 3 BASIC14.52□□□□□ -0.09
DNMT3BQ9UBC3 CU639417.1-201ENST00000464664 460 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
DNMT3BQ9UBC3 RN7SL128P-201ENST00000467883 305 ntBASIC14.52□□□□□ -0.09
DNMT3BQ9UBC3 AL928742.1-201ENST00000497397 548 ntTSL 4 BASIC14.52□□□□□ -0.09
DNMT3BQ9UBC3 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
DNMT3BQ9UBC3 UBR5-AS1-202ENST00000520820 800 ntTSL 2 BASIC14.52□□□□□ -0.09
DNMT3BQ9UBC3 AC105219.2-201ENST00000527908 299 ntTSL 4 BASIC14.52□□□□□ -0.09
DNMT3BQ9UBC3 AC087203.1-201ENST00000532111 1181 ntBASIC14.52□□□□□ -0.09
DNMT3BQ9UBC3 F11R-204ENST00000537746 1245 ntTSL 2 BASIC14.52□□□□□ -0.09
DNMT3BQ9UBC3 AC009779.3-204ENST00000549424 367 ntTSL 3 BASIC14.52□□□□□ -0.09
DNMT3BQ9UBC3 BID-209ENST00000551952 700 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
DNMT3BQ9UBC3 AC015712.5-201ENST00000558568 564 ntTSL 2 BASIC14.52□□□□□ -0.09
DNMT3BQ9UBC3 SMAD7-208ENST00000591805 1152 ntTSL 2 BASIC14.52□□□□□ -0.09
DNMT3BQ9UBC3 H2BFS-201ENST00000599962 460 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
DNMT3BQ9UBC3 PSMA6-215ENST00000622405 978 ntTSL 2 BASIC14.52□□□□□ -0.09
DNMT3BQ9UBC3 AC126755.5-201ENST00000622756 267 ntBASIC14.52□□□□□ -0.09
DNMT3BQ9UBC3 PSMA6-217ENST00000628955 364 ntTSL 5 BASIC14.52□□□□□ -0.09
DNMT3BQ9UBC3 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
DNMT3BQ9UBC3 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
DNMT3BQ9UBC3 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC14.52□□□□□ -0.09
DNMT3BQ9UBC3 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
DNMT3BQ9UBC3 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC14.52□□□□□ -0.09
DNMT3BQ9UBC3 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
DNMT3BQ9UBC3 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
DNMT3BQ9UBC3 DSTN-203ENST00000474024 1853 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
DNMT3BQ9UBC3 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC14.52□□□□□ -0.09
DNMT3BQ9UBC3 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC14.52□□□□□ -0.09
DNMT3BQ9UBC3 GOLGA8VP-201ENST00000559009 1798 ntBASIC14.52□□□□□ -0.09
DNMT3BQ9UBC3 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC14.52□□□□□ -0.09
DNMT3BQ9UBC3 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC14.52□□□□□ -0.09
DNMT3BQ9UBC3 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC14.52□□□□□ -0.09
DNMT3BQ9UBC3 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
DNMT3BQ9UBC3 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
DNMT3BQ9UBC3 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC14.51□□□□□ -0.09
DNMT3BQ9UBC3 ZFP1-201ENST00000332307 1502 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
DNMT3BQ9UBC3 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
DNMT3BQ9UBC3 TCAM1P-207ENST00000485295 1537 ntBASIC14.51□□□□□ -0.09
DNMT3BQ9UBC3 SPAAR-203ENST00000636776 1538 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
DNMT3BQ9UBC3 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
DNMT3BQ9UBC3 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
DNMT3BQ9UBC3 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
DNMT3BQ9UBC3 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC14.51□□□□□ -0.09
DNMT3BQ9UBC3 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
DNMT3BQ9UBC3 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
DNMT3BQ9UBC3 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
DNMT3BQ9UBC3 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
DNMT3BQ9UBC3 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
DNMT3BQ9UBC3 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
DNMT3BQ9UBC3 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
DNMT3BQ9UBC3 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
DNMT3BQ9UBC3 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC14.51□□□□□ -0.09
DNMT3BQ9UBC3 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC14.51□□□□□ -0.09
DNMT3BQ9UBC3 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC14.51□□□□□ -0.09
DNMT3BQ9UBC3 MRPL33-201ENST00000296102 518 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
DNMT3BQ9UBC3 HMGCLL1-203ENST00000370850 1171 ntTSL 2 BASIC14.51□□□□□ -0.09
DNMT3BQ9UBC3 MRPL33-202ENST00000379666 404 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
DNMT3BQ9UBC3 GEMIN8P4-201ENST00000380526 729 ntBASIC14.51□□□□□ -0.09
DNMT3BQ9UBC3 AL161733.1-201ENST00000421067 462 ntTSL 3 BASIC14.51□□□□□ -0.09
DNMT3BQ9UBC3 AL080243.1-201ENST00000423293 1060 ntBASIC14.51□□□□□ -0.09
DNMT3BQ9UBC3 HNRNPA1P2-207ENST00000432375 960 ntBASIC14.51□□□□□ -0.09
DNMT3BQ9UBC3 DLEU2-205ENST00000443587 705 ntTSL 5 BASIC14.51□□□□□ -0.09
DNMT3BQ9UBC3 RN7SL351P-201ENST00000469306 248 ntBASIC14.51□□□□□ -0.09
DNMT3BQ9UBC3 NAV2-AS2-201ENST00000533767 782 ntTSL 2 BASIC14.51□□□□□ -0.09
DNMT3BQ9UBC3 ANAPC15-217ENST00000545944 704 ntAPPRIS P3 TSL 3 BASIC14.51□□□□□ -0.09
DNMT3BQ9UBC3 HNRNPA1P5-201ENST00000558213 966 ntBASIC14.51□□□□□ -0.09
DNMT3BQ9UBC3 AL132801.1-201ENST00000559675 567 ntTSL 4 BASIC14.51□□□□□ -0.09
DNMT3BQ9UBC3 LINC02252-201ENST00000565706 487 ntTSL 3 BASIC14.51□□□□□ -0.09
DNMT3BQ9UBC3 MBP-238ENST00000580402 915 ntTSL 5 BASIC14.51□□□□□ -0.09
DNMT3BQ9UBC3 KXD1-211ENST00000599319 707 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
DNMT3BQ9UBC3 AC008982.2-201ENST00000600473 493 ntTSL 5 BASIC14.51□□□□□ -0.09
DNMT3BQ9UBC3 AC005274.1-201ENST00000623460 802 ntBASIC14.51□□□□□ -0.09
DNMT3BQ9UBC3 ADAMTS9-AS1-216ENST00000626280 882 ntTSL 5 BASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 113.2 ms