Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 ELN-211ENST00000414324 3139 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
RSPO3Q9BXY4 VILL-201ENST00000283713 2970 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RSPO3Q9BXY4 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
RSPO3Q9BXY4 LRRC32-201ENST00000260061 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RSPO3Q9BXY4 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RSPO3Q9BXY4 PRAM1-201ENST00000423345 2667 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RSPO3Q9BXY4 MAP7D2-201ENST00000379643 3918 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
RSPO3Q9BXY4 C9orf170-201ENST00000623052 3239 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
RSPO3Q9BXY4 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
RSPO3Q9BXY4 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RSPO3Q9BXY4 NCF4-202ENST00000397147 1641 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
RSPO3Q9BXY4 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RSPO3Q9BXY4 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
RSPO3Q9BXY4 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RSPO3Q9BXY4 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC12.82□□□□□ -0.36
RSPO3Q9BXY4 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RSPO3Q9BXY4 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
RSPO3Q9BXY4 SLC16A6P1-201ENST00000413214 1059 ntBASIC12.82□□□□□ -0.36
RSPO3Q9BXY4 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC12.82□□□□□ -0.36
RSPO3Q9BXY4 OARD1-212ENST00000482515 832 ntTSL 2 BASIC12.82□□□□□ -0.36
RSPO3Q9BXY4 AC106794.1-201ENST00000506935 792 ntBASIC12.82□□□□□ -0.36
RSPO3Q9BXY4 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
RSPO3Q9BXY4 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC12.82□□□□□ -0.36
RSPO3Q9BXY4 KLF17P1-201ENST00000547105 1126 ntBASIC12.82□□□□□ -0.36
RSPO3Q9BXY4 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC12.82□□□□□ -0.36
RSPO3Q9BXY4 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC12.82□□□□□ -0.36
RSPO3Q9BXY4 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC12.82□□□□□ -0.36
RSPO3Q9BXY4 AC026740.1-201ENST00000607068 791 ntBASIC12.82□□□□□ -0.36
RSPO3Q9BXY4 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC12.82□□□□□ -0.36
RSPO3Q9BXY4 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RSPO3Q9BXY4 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC12.82□□□□□ -0.36
RSPO3Q9BXY4 RIN2-202ENST00000440354 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
RSPO3Q9BXY4 SLC37A4-202ENST00000357590 2356 ntTSL 5 BASIC12.82□□□□□ -0.36
RSPO3Q9BXY4 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
RSPO3Q9BXY4 AGPAT1-203ENST00000375107 2234 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RSPO3Q9BXY4 SLC5A9-210ENST00000533824 2219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
RSPO3Q9BXY4 LRCH3-203ENST00000425562 2970 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
RSPO3Q9BXY4 RBM4-201ENST00000310092 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RSPO3Q9BXY4 RASA4CP-203ENST00000446874 3193 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
RSPO3Q9BXY4 PIGC-202ENST00000367728 2630 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
RSPO3Q9BXY4 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
RSPO3Q9BXY4 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RSPO3Q9BXY4 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC12.82□□□□□ -0.36
RSPO3Q9BXY4 CWC27-201ENST00000381070 2078 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RSPO3Q9BXY4 FAM156A-208ENST00000615092 2098 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
RSPO3Q9BXY4 SLC26A6-202ENST00000337000 2317 ntTSL 2 BASIC12.82□□□□□ -0.36
RSPO3Q9BXY4 GUCY1B3-204ENST00000505154 2316 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
RSPO3Q9BXY4 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
RSPO3Q9BXY4 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
RSPO3Q9BXY4 NPNT-211ENST00000506666 2187 ntTSL 2 BASIC12.81□□□□□ -0.36
RSPO3Q9BXY4 SGSM3-201ENST00000248929 2969 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RSPO3Q9BXY4 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
RSPO3Q9BXY4 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC12.81□□□□□ -0.36
RSPO3Q9BXY4 RAB37-204ENST00000392613 2617 ntAPPRIS ALT1 TSL 2 BASIC12.81□□□□□ -0.36
RSPO3Q9BXY4 AL021155.1-201ENST00000438808 2637 ntBASIC12.81□□□□□ -0.36
RSPO3Q9BXY4 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RSPO3Q9BXY4 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RSPO3Q9BXY4 KRT8P18-201ENST00000413425 1445 ntBASIC12.81□□□□□ -0.36
RSPO3Q9BXY4 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
RSPO3Q9BXY4 SERF1B-204ENST00000506542 1666 ntTSL 3 BASIC12.81□□□□□ -0.36
RSPO3Q9BXY4 AC019205.2-203ENST00000421315 3362 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
RSPO3Q9BXY4 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
RSPO3Q9BXY4 SDCCAG3P2-201ENST00000326105 1023 ntBASIC12.81□□□□□ -0.36
RSPO3Q9BXY4 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
RSPO3Q9BXY4 AGER-203ENST00000375065 665 ntTSL 2 BASIC12.81□□□□□ -0.36
RSPO3Q9BXY4 NCR3-202ENST00000376071 541 ntTSL 5 BASIC12.81□□□□□ -0.36
RSPO3Q9BXY4 AC006987.1-201ENST00000413610 527 ntBASIC12.81□□□□□ -0.36
RSPO3Q9BXY4 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC12.81□□□□□ -0.36
RSPO3Q9BXY4 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC12.81□□□□□ -0.36
RSPO3Q9BXY4 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC12.81□□□□□ -0.36
RSPO3Q9BXY4 ESRRAP2-203ENST00000453309 822 ntTSL 5 BASIC12.81□□□□□ -0.36
RSPO3Q9BXY4 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC12.81□□□□□ -0.36
RSPO3Q9BXY4 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
RSPO3Q9BXY4 AL713999.1-201ENST00000473363 753 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
RSPO3Q9BXY4 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
RSPO3Q9BXY4 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC12.81□□□□□ -0.36
RSPO3Q9BXY4 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC12.81□□□□□ -0.36
RSPO3Q9BXY4 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC12.81□□□□□ -0.36
RSPO3Q9BXY4 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC12.81□□□□□ -0.36
RSPO3Q9BXY4 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC12.81□□□□□ -0.36
RSPO3Q9BXY4 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC12.81□□□□□ -0.36
RSPO3Q9BXY4 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
RSPO3Q9BXY4 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
RSPO3Q9BXY4 IKBKB-218ENST00000520835 2403 ntTSL 2 BASIC12.81□□□□□ -0.36
RSPO3Q9BXY4 AC022364.1-202ENST00000617468 2409 ntBASIC12.81□□□□□ -0.36
RSPO3Q9BXY4 SECISBP2-201ENST00000339901 3320 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
RSPO3Q9BXY4 AMHR2-204ENST00000550311 1787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
RSPO3Q9BXY4 CYFIP2-219ENST00000616178 4210 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
RSPO3Q9BXY4 FLAD1-207ENST00000368433 2656 ntTSL 2 BASIC12.81□□□□□ -0.36
RSPO3Q9BXY4 CCDC88C-201ENST00000331194 3104 ntTSL 5 BASIC12.81□□□□□ -0.36
RSPO3Q9BXY4 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RSPO3Q9BXY4 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RSPO3Q9BXY4 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RSPO3Q9BXY4 SKA3-202ENST00000314759 2919 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
RSPO3Q9BXY4 TRIM4-203ENST00000355947 3383 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
RSPO3Q9BXY4 INSC-205ENST00000525218 1576 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
RSPO3Q9BXY4 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
RSPO3Q9BXY4 CPNE5-201ENST00000244751 3897 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RSPO3Q9BXY4 ATP1B3-201ENST00000286371 1811 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RSPO3Q9BXY4 MUC1-225ENST00000612778 1836 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms